Gchil3265.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3265.t1
Unique NameGchil3265.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length266
Homology
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S0BKU3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BKU3_9RHOD)

HSP 1 Score: 122 bits (306), Expect = 6.400e-31
Identity = 54/106 (50.94%), Postives = 76/106 (71.70%), Query Frame = 0
Query:  154 RWKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAVRDANAR 259
            RW   ED LL+++V EHGA  W+ +A+HFP R+ RQVRLRW NHL P ++ R WTV ED ++ D  ++ GN+W+LIA RL GR+DN+ KNR+  ++R  +R+A  R
Sbjct:   62 RWTPAEDRLLRQLVNEHGAKNWSKLAKHFPRRHSRQVRLRWKNHLSPDIDDREWTVTEDKIITDTQKRFGNRWSLIARRLPGRSDNATKNRFNRLIR--MREARRR 165          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S1TIW2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIW2_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 1.780e-29
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAVRD 255
            W+  EDELLQR+V ++GA +W  +A   PGR+G+Q R RW+N L P L KR WT  ED +++  H +LGNKW+ IA +L GRTDN+VKNR+ + +RR +RD
Sbjct:  155 WRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQLRD 255          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S1XHT6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHT6_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 1.010e-28
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAVRD 255
            W+  EDELLQR+V ++GA +W  +A   PGR+G+Q R RW+N L P L KR WT  ED +++  H +LGNKW+ IA +L GRTDN+VKNR+ + +RR +RD
Sbjct:  241 WRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQLRD 341          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S2ZT13_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT13_9RHOD)

HSP 1 Score: 116 bits (290), Expect = 1.440e-28
Identity = 48/99 (48.48%), Postives = 72/99 (72.73%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAV 253
            W + ED LL+ +V +HG  +W  +A++ PGR G+Q R RW+N L P L+++ WT +ED +++ AH Q GNKW+LIA +L GRTDNS+KNR+ S ++R +
Sbjct:   64 WTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRL 162          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S2ZT18_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT18_9RHOD)

HSP 1 Score: 116 bits (290), Expect = 6.340e-28
Identity = 48/99 (48.48%), Postives = 72/99 (72.73%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAV 253
            W + ED LL+ +V +HG  +W  +A++ PGR G+Q R RW+N L P L+++ WT +ED +++ AH Q GNKW+LIA +L GRTDNS+KNR+ S ++R +
Sbjct:   64 WTKAEDVLLRSLVEKHGPNRWTLIAKNIPGRTGKQARERWLNQLDPELKRKGWTAEEDQIIIRAHAQYGNKWSLIASQLKGRTDNSIKNRFNSTLKRRL 162          
BLAST of Gchil3265.t1 vs. uniprot
Match: B7G6Q9_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Q9_PHATC)

HSP 1 Score: 112 bits (280), Expect = 9.240e-28
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAV 253
            W + ED  +  +V ++GA KW+ +ARH PGR G+Q R RW NHL P + K AW ++ED ++++ H  LGN+WA IA RL GRTDN++KN + S +RR +
Sbjct:   19 WTEDEDRKVTELVQKYGAKKWSTIARHLPGRVGKQCRERWCNHLDPGICKEAWKLEEDRMILECHLTLGNRWAEIAKRLPGRTDNAIKNHWNSSMRRKI 117          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A5J4Z7G3_PORPP (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 114 bits (286), Expect = 1.620e-27
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRR 251
            W+  EDELL+ +VA+ G  +W+ VA   PGR G+Q R RW+N L PSL K  WT +ED ++MDAH +LGN+W+ IA  L GRTDNSVKNR+ S +++
Sbjct:  106 WRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKK 202          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A1V9YE35_9STRA (MYB DNA binding protein/ transcription factor (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YE35_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.270e-27
Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVR 250
            W  +EDELLQR+V +HGA +W  +A + PGRNG+Q R RW NHL P++ K  WTV+ED +L++   + GN+WA I   L GRTDN++KN + S V+
Sbjct:   61 WLAFEDELLQRIVGKHGARRWGFIASYIPGRNGKQCRERWHNHLSPNINKGPWTVEEDRMLVELQSKYGNRWAQIMKELPGRTDNAIKNHWYSNVK 156          
BLAST of Gchil3265.t1 vs. uniprot
Match: R1E4L3_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E4L3_EMIHU)

HSP 1 Score: 116 bits (290), Expect = 3.990e-27
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRR 251
            W   ED +L+ +VAE GA +W+ +A   PGR G+Q R RW NHL P++ K AWT +ED ++M AH +LGNKWA IA RL GRTDN++KN + S V+R
Sbjct:  107 WSDPEDAMLRSLVAEQGAKRWSAIAAKLPGRIGKQCRERWHNHLNPTISKNAWTEEEDQIIMQAHLELGNKWAEIAKRLPGRTDNAIKNHWNSSVKR 203          
BLAST of Gchil3265.t1 vs. uniprot
Match: A0A7S3IBJ5_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3IBJ5_9CILI)

HSP 1 Score: 114 bits (286), Expect = 7.110e-27
Identity = 48/100 (48.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:  155 WKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQPSLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVRRAVR 254
            W Q ED+++ ++V ++GA  W+ +A H PGR G+Q R RW NHL PS++++ WT QED  +++ H Q+GN+WA IA RL GRTDNS+KN + S ++R ++
Sbjct:   78 WTQEEDQIVLKLVQKYGARHWSTIASHLPGRIGKQCRERWHNHLNPSIKRQGWTSQEDIQIINLHMQIGNRWAEIAKRLPGRTDNSIKNHWNSTLKRKMK 177          
The following BLAST results are available for this feature:
BLAST of Gchil3265.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0BKU3_9RHOD6.400e-3150.94Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TIW2_9RHOD1.780e-2952.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XHT6_9RHOD1.010e-2852.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZT13_9RHOD1.440e-2848.48Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S2ZT18_9RHOD6.340e-2848.48Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
B7G6Q9_PHATC9.240e-2848.48Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A5J4Z7G3_PORPP1.620e-2753.61Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
A0A1V9YE35_9STRA2.270e-2751.04MYB DNA binding protein/ transcription factor (Fra... [more]
R1E4L3_EMIHU3.990e-2753.61Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
A0A7S3IBJ5_9CILI7.110e-2748.00Hypothetical protein n=1 Tax=Fabrea salina TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 203..251
e-value: 4.6E-13
score: 59.4
coord: 151..200
e-value: 1.5E-13
score: 61.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 147..198
score: 10.580304
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 199..249
score: 9.895173
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 206..249
e-value: 1.90732E-9
score: 50.2666
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 154..198
e-value: 1.1631E-12
score: 59.1262
NoneNo IPR availableGENE3D1.10.10.60coord: 152..203
e-value: 6.2E-17
score: 63.3
NoneNo IPR availableGENE3D1.10.10.60coord: 205..265
e-value: 1.3E-16
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..148
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 137..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 152..198
e-value: 1.2E-13
score: 51.1
coord: 204..247
e-value: 4.0E-13
score: 49.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 147..202
score: 21.383999
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 204..253
score: 18.879965
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 149..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1268405..1269202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3265.t1Gchil3265.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1268405..1269202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3265.t1 ID=Gchil3265.t1|Name=Gchil3265.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=266bp
MSVSMLLNAANAVTAAERCRAIDPRSGRIPITFLLARCDDLDDHTRRELS
HLASHSPSLSLERRSCDAHPSIPEPPLPSPSHLTEQQALDDIERTANANA
KRTNSGSSGSSGSGSTSTTLTNSAIRKATGSAPGSSSQSTSTSTGSGAPR
RRRRWKQWEDELLQRVVAEHGATKWNNVARHFPGRNGRQVRLRWMNHLQP
SLEKRAWTVQEDTVLMDAHRQLGNKWALIAMRLCGRTDNSVKNRYKSIVR
RAVRDANARDANARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf