Gchil3277.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3277.t1
Unique NameGchil3277.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length265
Homology
BLAST of Gchil3277.t1 vs. uniprot
Match: A0A2V3IYJ8_9FLOR (Alpha-protein kinase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYJ8_9FLOR)

HSP 1 Score: 380 bits (977), Expect = 1.200e-128
Identity = 183/242 (75.62%), Postives = 214/242 (88.43%), Query Frame = 0
Query:    1 MDSSGTVRRMSSSDIVPAFEDPPSAHTQKEIISDGFRMITRTLREPFFELYCEAELESSQFIVQFDVFPFSAGGQRLAFQGRMLERLENGRLKSHMPVVVKLQMATSDYLGRSLSERTQVCDVEADNTVRKHDITSSVLEKWCALGTNKKVDVLPAAKIVVTRECSVDQISQERFPMLQHLFKKLSLDAVLYSGAVGTVEEYMEGRFTKFLNNDGENNSRVRANFPAAFAHWSWVDSGGTIM 242
            M+ S +V  +SSSD+ PAFEDPPSAH QKEII+DG+RMITRTL+EP FELYCEAELES Q++VQF+VFPFSAGGQRLAFQGRMLER++ G LKS +PVVVKLQMAT+D+L  SL+ERT++CD+EA+NTVRKHDITS++LEKW  LGTNK V VL A K+++TR C+VD ISQ RF +L HLFKKLSLDAVLY GAVGTVEEY+EGRFTKFLNNDG +NS VRANFPAAFAHWSWV+SGG +M
Sbjct:    1 MEPSESVHELSSSDVNPAFEDPPSAHLQKEIINDGYRMITRTLQEPLFELYCEAELESPQYVVQFEVFPFSAGGQRLAFQGRMLERMDGGTLKSILPVVVKLQMATTDFLSYSLAERTRICDLEANNTVRKHDITSNLLEKWYKLGTNKSVQVLSAEKVILTRGCAVDHISQHRFAVLHHLFKKLSLDAVLYQGAVGTVEEYLEGRFTKFLNNDGGHNSMVRANFPAAFAHWSWVNSGGLLM 242          
BLAST of Gchil3277.t1 vs. uniprot
Match: R7QV13_CHOCR (Alpha-type protein kinase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV13_CHOCR)

HSP 1 Score: 251 bits (640), Expect = 9.160e-78
Identity = 126/233 (54.08%), Postives = 162/233 (69.53%), Query Frame = 0
Query:   10 MSSSDIVPAFEDPPSAHTQKEIISDGFRMITRTLREPFFELYCEAELESSQFIVQFDVFPFSAGGQRLAFQGRMLERLENGRLKSHMPVVVKLQMATSDYLGRSLSERTQVCDVEADNTVRKHDITSSVLEKWCALGTNKKVDVLPAAKIVVTRECSVDQISQERFPMLQHLFKKLSLDAVLYSGAVGTVEEYMEGRFTKFLNNDGENNSRVRANFPAAFAHWSWVDSGGTIM 242
            M S+ IV  F  PP++  Q EII DG+ +I   LREP  EL+C A++    F++ FDVFPFSAG QRLAF+G + ER+ +G     +  +VK++MA  + +    +ERT++   EA  TVRKHD+T   +EKWCALG NK V VL   K+ +TR CS+  I + RFP+L  LFKKLSLDAVLY  AVGTVE+Y+ GRFTKFLNNDG  N+ V ANFPAAF+HWSWV+S G +M
Sbjct:    1 MDSASIV--FALPPTSCAQGEIIRDGYNLIVDVLREPLRELHCAADITPQYFVI-FDVFPFSAGAQRLAFKGSIYERVASGDPVFCVHAIVKMEMAIPEVVETMETERTRINATEAQKTVRKHDVTRQYIEKWCALGINKSVHVLSTEKVTITRGCSLQNIDRRRFPILHQLFKKLSLDAVLYKNAVGTVEDYLPGRFTKFLNNDGMANNEVSANFPAAFSHWSWVESKGALM 230          
The following BLAST results are available for this feature:
BLAST of Gchil3277.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYJ8_9FLOR1.200e-12875.62Alpha-protein kinase 1 n=1 Tax=Gracilariopsis chor... [more]
R7QV13_CHOCR9.160e-7854.08Alpha-type protein kinase domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.200.10MHCK/EF2 kinasecoord: 204..263
e-value: 2.5E-7
score: 32.6
IPR004166MHCK/EF2 kinasePFAMPF02816Alpha_kinasecoord: 73..253
e-value: 3.3E-11
score: 43.6
IPR004166MHCK/EF2 kinasePROSITEPS51158ALPHA_KINASEcoord: 43..264
score: 12.042478
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 17..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:1304151..1305039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3277.t1Gchil3277.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 1304151..1305039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3277.t1 ID=Gchil3277.t1|Name=Gchil3277.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=265bp
MDSSGTVRRMSSSDIVPAFEDPPSAHTQKEIISDGFRMITRTLREPFFEL
YCEAELESSQFIVQFDVFPFSAGGQRLAFQGRMLERLENGRLKSHMPVVV
KLQMATSDYLGRSLSERTQVCDVEADNTVRKHDITSSVLEKWCALGTNKK
VDVLPAAKIVVTRECSVDQISQERFPMLQHLFKKLSLDAVLYSGAVGTVE
EYMEGRFTKFLNNDGENNSRVRANFPAAFAHWSWVDSGGTIMTLGLWGWK
NSLRNTGATDCATT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004166MHCK_EF2_kinase
IPR011009Kinase-like_dom_sf