Gchil573.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil573.t1
Unique Name	Gchil573.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	115

Homology

[Close]

BLAST of Gchil573.t1 vs. uniprot
Match: A0A2V3IF37_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF37_9FLOR)

HSP 1 Score: 79.3 bits (194), Expect = 1.140e-16
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 0

Query:    7 KRRAPLLVDSDEDQEDLISQHVEARREAKCNRLKLEEDRLDFEQRKYERDAERKQRLQEQKVLRLSPDERRIIFVVVLAAIDHEECHDLLAERIQMISVMGALVKKLQ 114
            +++ PL+VDSD++++D+IS H+ ARRE +  RLKLEEDR  FEQR+ ER+  R QR QE +  R + +  RI      AA+D E+     AE    + V+ AL  KLQ
Sbjct:   24 RKKRPLIVDSDDEEQDMISAHITARREIEGKRLKLEEDRFFFEQRREEREESRLQRAQELQEKRGTLEAIRIDLEEKRAAMDREQMKQYAAESTATLDVLAALATKLQ 131

[Close]

BLAST of Gchil573.t1 vs. uniprot
Match: A0A2V3J3D3_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3D3_9FLOR)

HSP 1 Score: 62.8 bits (151), Expect = 3.300e-9
Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 0

Query:    7 KRRAPLLVDSDEDQEDLISQHVEARREAKCNRLKLEEDRLDFEQRKYERDAERKQRLQEQKVLRLSPDERRIIFVVVLAAIDHEECHDLLAERIQM--ISVMGALVKKLQ 114
            +++ PL+VDSD++++D+IS H+ ARRE +  RLKLEEDR  FEQR+ ER                             AA+D E+     AER     + V+ AL KKLQ
Sbjct:  228 RKKRPLIVDSDDEEQDMISDHIAARREIEGKRLKLEEDRFCFEQRREERXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAMDREQMKQYAAERTATATLDVLAALAKKLQ 337

The following BLAST results are available for this feature:

BLAST of Gchil573.t1 vs. uniprot

BLAST of Gchil573.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IF37_9FLOR	1.140e-16	44.44	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3J3D3_9FLOR	3.300e-9	38.18	Uncharacterized protein n=3 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..66

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:353207..353551 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil573.t1	Gchil573.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 353207..353551 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MRIKNIKRRAPLLVDSDEDQEDLISQHVEARREAKCNRLKLEEDRLDFEQ
RKYERDAERKQRLQEQKVLRLSPDERRIIFVVVLAAIDHEECHDLLAERI
QMISVMGALVKKLQ*