Gchil573.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil573.t1
Unique NameGchil573.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:353207..353551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil573Gchil573Gracilaria chilensis NLEC103_M9 malegenetig00004380_pilon 353207..353551 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil573.t1.stop1Gchil573.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004380_pilon 353207..353209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil573.t1.CDS1Gchil573.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004380_pilon 353207..353551 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil573.t1.exon1Gchil573.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004380_pilon 353207..353551 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil573.t1.start1Gchil573.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004380_pilon 353549..353551 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil573.t1Gchil573.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004380_pilon 353207..353551 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=115bp
MRIKNIKRRAPLLVDSDEDQEDLISQHVEARREAKCNRLKLEEDRLDFEQ
RKYERDAERKQRLQEQKVLRLSPDERRIIFVVVLAAIDHEECHDLLAERI
QMISVMGALVKKLQ*
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spliced messenger RNA

>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=345bp|location=Sequence derived from alignment at tig00004380_pilon:353207..353551- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCATCAAGAATATCAAGCGCCGTGCGCCTTTGTTGGTCGACTCGGA
CGAAGACCAAGAAGATCTTATCAGCCAGCATGTGGAGGCGAGGAGGGAGG
CCAAGTGCAATCGCTTGAAGCTAGAAGAAGATCGTCTGGATTTCGAGCAA
CGCAAATACGAACGGGACGCAGAGAGGAAGCAACGACTACAGGAGCAGAA
AGTGCTCCGTCTTTCTCCGGATGAGCGTCGTATAATTTTTGTGGTGGTTC
TCGCAGCTATAGATCACGAAGAATGCCATGATTTGCTTGCTGAGCGTATA
CAGATGATATCAGTGATGGGCGCCCTTGTGAAGAAGCTTCAGTAA
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protein sequence of Gchil573.t1

>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MRIKNIKRRAPLLVDSDEDQEDLISQHVEARREAKCNRLKLEEDRLDFEQ
RKYERDAERKQRLQEQKVLRLSPDERRIIFVVVLAAIDHEECHDLLAERI
QMISVMGALVKKLQ*
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mRNA from alignment at tig00004380_pilon:353207..353551-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=345bp|location=Sequence derived from alignment at tig00004380_pilon:353207..353551- (Gracilaria chilensis NLEC103_M9 male)
ATGCGCATCAAGAATATCAAGCGCCGTGCGCCTTTGTTGGTCGACTCGGA
CGAAGACCAAGAAGATCTTATCAGCCAGCATGTGGAGGCGAGGAGGGAGG
CCAAGTGCAATCGCTTGAAGCTAGAAGAAGATCGTCTGGATTTCGAGCAA
CGCAAATACGAACGGGACGCAGAGAGGAAGCAACGACTACAGGAGCAGAA
AGTGCTCCGTCTTTCTCCGGATGAGCGTCGTATAATTTTTGTGGTGGTTC
TCGCAGCTATAGATCACGAAGAATGCCATGATTTGCTTGCTGAGCGTATA
CAGATGATATCAGTGATGGGCGCCCTTGTGAAGAAGCTTCAGTAA
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Coding sequence (CDS) from alignment at tig00004380_pilon:353207..353551-

>Gchil573.t1 ID=Gchil573.t1|Name=Gchil573.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=345bp|location=Sequence derived from alignment at tig00004380_pilon:353207..353551- (Gracilaria chilensis NLEC103_M9 male)
ATGCGCATCAAGAATATCAAGCGCCGTGCGCCTTTGTTGGTCGACTCGGA
CGAAGACCAAGAAGATCTTATCAGCCAGCATGTGGAGGCGAGGAGGGAGG
CCAAGTGCAATCGCTTGAAGCTAGAAGAAGATCGTCTGGATTTCGAGCAA
CGCAAATACGAACGGGACGCAGAGAGGAAGCAACGACTACAGGAGCAGAA
AGTGCTCCGTCTTTCTCCGGATGAGCGTCGTATAATTTTTGTGGTGGTTC
TCGCAGCTATAGATCACGAAGAATGCCATGATTTGCTTGCTGAGCGTATA
CAGATGATATCAGTGATGGGCGCCCTTGTGAAGAAGCTTCAGTAA
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