Gchil615.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil615.t1
Unique NameGchil615.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length292
Homology
BLAST of Gchil615.t1 vs. uniprot
Match: A0A2V3IZV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV6_9FLOR)

HSP 1 Score: 375 bits (964), Expect = 1.600e-127
Identity = 186/290 (64.14%), Postives = 223/290 (76.90%), Query Frame = 0
Query:    1 MRWAVAVLGGSMYSIDQAPRAEAVYNPFGPPPDLVMRLKQRTPEEMAERLFQEDLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEKLQYESRFVRSSGYVIADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAITLRPDESEGSVYDVELKTIARHQQRDKIPINIDAAFRIREQSGWEKVEARDDHEFREGEKEGLYTTEVVRQDVRLSTDDLRIQPLIKHVETSAIYGWDRDRDDCFWAWQKTSTYLTKSNLTYVDARGRPVDVRWYKLFYTR 290
            MRWAV+ + G    I      EA+YNPF PPPD+V RLKQR  EE  ER+FQEDL+YP+FFAG WK+ S LLSVACPAGYKLFGR G+FEEAKKGIGE +QY+SRF+RS G VIADRAFNV +IARA +GP SVL C T GN V++L +TL+P   +GSV+ V+LKTI R QQ D +P N++AAF+IRE++ W  ++A+  H       EGLYTTE VRQ+VRL TDDLRIQP IKHVET+ I+ WD D  D F AWQKTSTYLT+SNL YVDARGR VDVRWY++ Y+R
Sbjct:   63 MRWAVSGISGVFVGIQIPQPTEAIYNPFTPPPDIVARLKQRVSEEAPERMFQEDLYYPDFFAGTWKTNSMLLSVACPAGYKLFGRMGSFEEAKKGIGESVQYDSRFIRSMGNVIADRAFNVASIARAAMGPYSVLDCETKGNRVDQLQLTLKPGGPDGSVFAVDLKTIGRMQQTDYVPRNMEAAFKIREEATWTDIDAKVQHTA----GEGLYTTETVRQEVRLDTDDLRIQPSIKHVETTTIFLWDDDTQDNFRAWQKTSTYLTRSNLQYVDARGRAVDVRWYQVHYSR 348          
BLAST of Gchil615.t1 vs. uniprot
Match: A0A7S2EFK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EFK5_TRICV)

HSP 1 Score: 82.4 bits (202), Expect = 4.350e-14
Identity = 79/269 (29.37%), Postives = 119/269 (44.24%), Query Frame = 0
Query:   50 LFQEDLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEK--LQYESRFVRSSG-YVIADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAITLRPDESEGSVYDVELKTIARHQQRDKIPINIDAAFRIREQSGWEKVEARDDHEFREGEKEGLYTTEVVRQDV-----------------RLSTDDLRIQPLIKHVETSAIYGWDRDRD-DCFWAWQKTSTYLTKSNLTYVD------ARGRPVDVRWYKLFYTRA 291
            L + D+ YP++F G W   S    V  P G +LFG       A+  +G    L Y SRFVR  G  VIADR FNV  IA+A++G  +V+  +      +R    L P  S G +  V+L T+AR Q+      ++D +                            + +EVVRQ V                 + S    R   L+K +ET+++Y +    +  C    Q+++T+L  S    V       +RGRP+DVR+Y + YT+A
Sbjct:  204 LERPDVTYPDWFMGVWDVRSVCTEVQAPCGPQLFGGNATLSAARAEVGPSGALGYRSRFVRGGGGTVIADRDFNVREIAKASMGINAVVDVSLA--TPDRFTCLLSPAGS-GGLLSVDLITLARRQE------SVDGS--------------------------NFHCSEVVRQIVAPANAAKPQGSIPVGPPKSSGGPGRPPTLLKEIETASLYTFVGPGEVQCR---QRSATFLLPSQQDPVALKLWEMSRGRPIDVRFYDVTYTKA 434          
BLAST of Gchil615.t1 vs. uniprot
Match: A0A7S4I487_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I487_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.550e-13
Identity = 78/262 (29.77%), Postives = 116/262 (44.27%), Query Frame = 0
Query:   54 DLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEK--LQYESRFVRSSGY-----------VIADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAITLRPDESEGSVYDVELKTIARHQQR-DKIPINIDAAFR-IREQSGWEKVEARDDHEFREGEKEGLYTTEVV---RQDVRLSTDDLRIQPLIKHVETSAIYGW-DRDRDDCFWAWQKTSTYLTKSNLTYVD------ARGRPVDVRWYKLFYTR 290
            D++YP +FAG W   S    V  P G +LFG       A++ IG    L+Y SRFV                VIADR +NV  I RA++G  +++         N+L+  L P    G++   EL T+AR Q+  D    +     R I   +G EK +                T+ VV              R  PL+K +ET+++Y     DR  C    Q+++T+L  S    +       +RGRP+DVR+Y + YT+
Sbjct:  141 DVYYPPWFAGVWTVDSITSDVRAPCGPQLFGGNATLAAARREIGPDGALRYRSRFVPGGXXXXXXXXXXXXSVIADREYNVREIVRASMGSNAIVDVPLA--TPNKLSCLLSP-AGAGTLLTAELITLARRQETIDSSNFHCSEVVRQIVAPAGGEKPK----------------TSVVVPGXXXXXXXXXXXARAAPLLKEIETASLYTLVSPDRVQCR---QRSATFLLPSQQDPIAYQLWQMSRGRPIDVRFYDVTYTK 380          
BLAST of Gchil615.t1 vs. uniprot
Match: A0A7S3Q293_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q293_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.190e-12
Identity = 69/270 (25.56%), Postives = 118/270 (43.70%), Query Frame = 0
Query:   50 LFQEDLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEKLQYESRFVRSSGYV---------IADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAITLRPDESEGSVYDVELKTIARHQQRDKIPINIDAAFRIREQSGWEKVEARDDHEFREGEKEGLYTTEVVRQDVRLSTDDLRIQP---------LIKHVETSAIYGWDRDRDDC-----FWAWQKTSTYLTKSNLT------YVDARGRPVDVRWYKLFYTR 290
            L + D++YP +F G W   S    +  P G  LFG    +  A   +   L+Y++RFV S+            +ADR +NV  IA+A +G  SVL  N   +  N+++I L P+ ++  +   +L T+ R                        + E+ +  EF        + +EVVRQ +  +  +    P         L+K +ET+++Y     +DD          Q+++T++  S         +   RGRP+DVR+Y + YT+
Sbjct:   89 LDRSDIYYPSYFNGVWNVDSITTDILAPCGVPLFGGNNTYTRALTEVNTSLRYKARFVASASETSSNSDHKTYVADREYNVVEIAKAAMGENSVL--NVPLSTPNKVSIVLTPNGAQ-QILKADLITLNR------------------------RSESINSCEF--------HCSEVVRQIIAPAKSNGVATPPMSPPSRSTLLKEIETTSLYT--AVKDDVGNVSEIRCRQRSATFILPSQSDPMMYRMWEATRGRPIDVRFYNVIYTK 321          
BLAST of Gchil615.t1 vs. uniprot
Match: A0A0S3TNL0_9CYAN (Uncharacterized protein n=12 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0S3TNL0_9CYAN)

HSP 1 Score: 60.5 bits (145), Expect = 4.300e-7
Identity = 63/244 (25.82%), Postives = 102/244 (41.80%), Query Frame = 0
Query:   54 DLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEKLQYESRFVRSS-------GYVIADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAITLRPDESEGSVYDVELKTIARHQQRDKIPINIDAAFRIREQSGWEKVEARDDHEFREGEKEGLYTTEVVRQDVRLSTDDLRIQPLIKHVETSAIYGWDRDRDDCFWAWQKTSTYLTKSNLTYVDARGRPVDVRWYKLFYTR 290
            DL YP++ AG W+ +STL+ +  P    +   T  FE  ++ + + L+++ RF+R S         V+ADRAFN   +ARA LG  +V+            ++ + PD     +      T  RH+ R  + I                V AR   +  +G      TTEV +Q  +        +P    VE++  Y      +      Q T+ YL+  +  Y  A   PV +  Y+L + R
Sbjct:   47 DLIYPDWMAGDWQLVSTLVDMVAPLAPDIV--TPGFEGNRQYLNQPLRFQVRFLRESTPVADTKSAVVADRAFNGLNLARAYLGDTAVI------------SVKVDPDSPNRQI------TFLRHE-RQLVSI----------------VSARATEKTSDGR---FITTEVFQQIFKGGG-----RPYFNSVESTTAYRKLSTSNPAIEGDQVTAVYLSPQDPDYFKAGSHPVALYRYRLEFFR 245          
The following BLAST results are available for this feature:
BLAST of Gchil615.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IZV6_9FLOR1.600e-12764.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2EFK5_TRICV4.350e-1429.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4I487_9STRA1.550e-1329.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3Q293_9STRA1.190e-1225.56Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0S3TNL0_9CYAN4.300e-725.82Uncharacterized protein n=12 Tax=Hapalosiphonaceae... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:626496..627497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil615.t1Gchil615.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 626496..627497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil615.t1 ID=Gchil615.t1|Name=Gchil615.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=292bp
MRWAVAVLGGSMYSIDQAPRAEAVYNPFGPPPDLVMRLKQRTPEEMAERL
FQEDLHYPEFFAGKWKSISTLLSVACPAGYKLFGRTGAFEEAKKGIGEKL
QYESRFVRSSGYVIADRAFNVTAIARATLGPKSVLQCNTLGNNVNRLAIT
LRPDESEGSVYDVELKTIARHQQRDKIPINIDAAFRIREQSGWEKVEARD
DHEFREGEKEGLYTTEVVRQDVRLSTDDLRIQPLIKHVETSAIYGWDRDR
DDCFWAWQKTSTYLTKSNLTYVDARGRPVDVRWYKLFYTRA*
back to top