Gchil601.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil601.t1
Unique NameGchil601.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length127
Homology
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BLAST of Gchil601.t1 vs. uniprot
Match: A0A2V3J6N5_9FLOR (Complex1_LYR_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N5_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 6.200e-28
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:   47 TLLKVLALYRELLRAVRFYLSKKRDSLALAIREDIWEKRNITGKELEKALWDGHMALERLQKWFPTSKQMSDGKDRGIKL 126
            T   VLALYR LLRAVR Y SKKRDS++ AI+E+  EKR+ITG EL+KALW  +M LERLQKW PTSKQM+ GKD  IKL
Sbjct:    6 TSTNVLALYRGLLRAVRHYPSKKRDSISQAIKEEFREKRSITGDELDKALWLANMELERLQKWIPTSKQMAQGKDMDIKL 85
The following BLAST results are available for this feature:
BLAST of Gchil601.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6N5_9FLOR6.200e-2868.75Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 50..104
e-value: 1.3E-5
score: 25.1
NoneNo IPR availableCDDcd20251Complex1_LYR_SFcoord: 51..104
e-value: 1.07935E-7
score: 43.6878

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:561223..562416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil601.t1Gchil601.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 561223..562416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil601.t1 ID=Gchil601.t1|Name=Gchil601.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=127bp
MVGIGCEETVVRRLVGRGGSSRQLSGGRGEQEVGGVHLEGSGLTRDTLLK
VLALYRELLRAVRFYLSKKRDSLALAIREDIWEKRNITGKELEKALWDGH
MALERLQKWFPTSKQMSDGKDRGIKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom