Gchil3577.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A2V3IU20_9FLOR (Putative RNA-binding protein YlmH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU20_9FLOR) HSP 1 Score: 213 bits (542), Expect = 9.040e-65 Identity = 126/274 (45.99%), Postives = 173/274 (63.14%), Query Frame = 0
Query: 14 LSLSPQQTEKLLNFAHANNIEKMLAQNMLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKFDE-RTTHRDFMGAVL-SSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
+ L+ QQ+EKLL++A + N+++ LA+ M+ ++ER+VRE FLTP+ES C+L +VRAI + A WGGY DAER ++V VE E +LD VVVKL G F + H DF+GAVL +GL R IGD+ VL+ +RGAQVI + I+ SV V V ++ + ELE +R K++ SVE+SLR+DAV SGGL SR + S+L GLV N R+ SK V+ D +S RG+GK+RV D S T++GRFRV+M RF
Sbjct: 1 MRLTEQQSEKLLSYAKSFNVDRSLAKRMIEMAERSVREWECEHGMFLTPVESGCLLKVVRAIPEVWATSWGGYDDAERCVIVCCHEDMVESESTVLDGIADNFVVVKLLGDFSGGKVRHGDFLGAVLHGAGLKRECIGDVMVLE-ERGAQVIATRQGGEIISQSVSQVANVKVEAQLASLKELEAVERRTKQITSVENSLRIDAVLSGGLGTSRTKMSELCASGLVRRNYAELRSASKSVQRGDVLSVRGLGKIRVDDWSETRKGRFRVTMTRF 273
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A2V3IT26_9FLOR (Putative RNA-binding protein YlmH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT26_9FLOR) HSP 1 Score: 183 bits (465), Expect = 1.250e-54 Identity = 101/165 (61.21%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 121 LEGKFDERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
+E FD++ +HR+FMGAVLS GLD + IG I VL RGAQVI + A +L+ S+Q VR VST +++LEET R +K V+SVESSLRLDAVGS GL+MSR +F+K L KGL+ HNQ VAR+GSK V V +TISARGVGK+ V+DVSRTKRGR+ VSM RF
Sbjct: 1 MEDNFDDKVSHRNFMGAVLSKGLDLAHIGIIRVLHDGRGAQVIMTHDVAYMLESSMQIVRHTMVSTHTHDMTQLEETGRAMKAVHSVESSLRLDAVGSSGLSMSRRKFAKPLAKGLISHNQRVARSGSKSVGVANTISARGVGKVCVEDVSRTKRGRYSVSMARF 165
BLAST of Gchil3577.t1 vs. uniprot
Match: R7QHZ9_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHZ9_CHOCR) HSP 1 Score: 165 bits (417), Expect = 4.960e-46 Identity = 97/267 (36.33%), Postives = 161/267 (60.30%), Query Frame = 0
Query: 22 EKLLNFAHANNIEKMLAQNMLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYR--VEDEQRLLDAANHELVVVKLEGKFDE-RTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
EKL+ +++++AQ +L+ ++ A+R+ + + S FLTP ES+ ++ + + A WGGY DAER +V CA+ ED +LL A + ++ + G F+ + HRD MGAVL +G+ R++IGDI V +G GAQV+ + A L+ + SVR +V P+ E+ +R +K + +VE+S+R+DAV S G +SR++ + + + GLV N + +K V+ D +S RGVGKL++ + S T +GR+R+SM R+
Sbjct: 9 EKLVAACTGRGVDRIIAQKVLSSAKSAMRDWSCVVSDFLTPPESAALVATLAQLPRLSAHAWGGYPDAERTAVV--CAHEDVAEDTAQLLRLAAPQFSLLSIAGDFEGGKVAHRDVMGAVLHAGVSRAKIGDILVEEGV-GAQVVAHADVAAFLEAQLVSVRDVSVLVERRPLEEIRVPERRVKLIQTVEASMRIDAVVSAGFKISRSKLATMAKSGLVFLNYTGVKGPAKNVKEGDVVSVRGVGKLKIAECSMTSKGRYRISMERY 272
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A0G4FWG9_VITBC (S4 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWG9_VITBC) HSP 1 Score: 168 bits (426), Expect = 8.570e-46 Identity = 99/263 (37.64%), Postives = 153/263 (58.17%), Query Frame = 0
Query: 22 EKLLNFAHANNIEKMLAQNMLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEK-GLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSM 282
+KLL +E M A+ L +E+A R+ + ++HFL PL + + I WGG+ AER+ + + V ++Q + + +EG F + HRDF+GA+L SG++R ++GD+ VL GQRGAQVI + + A +++ + SVR V P EL + KEV+SVE+SLRLDAV SGG+ +SR++ +K++E+ G+V N R+ SK V+ D I+ RG G+L + D+SRT RGR+R+ M
Sbjct: 157 DKLLKTLEIKGMEAMPARQALDAAEQASRQWRVTSTHFLPPLAVDVLREAFDKIAAVTLHSWGGFPGAERQRVFFHNSEMVMEDQAWREEYEDAFTALAIEGNFLFDPADHRDFLGAILGSGVERDRVGDVLVL-GQRGAQVIVESDVAEVVKAELTSVRTVNVYVEPIPFDELRAGEAKRKEVSSVEASLRLDAVASGGMRISRSKMAKMIEQEGVVYVNWKEVRSSSKEVKAGDVITVRGKGRLEIHDISRTSRGRYRLQM 418
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A836CE46_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE46_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.770e-42 Identity = 90/264 (34.09%), Postives = 158/264 (59.85%), Query Frame = 0
Query: 22 EKLLNFAHANNIEKMLAQNMLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMR 284
+KLL+ A ++K +A +L + A+R ++ + FLTP E + +L+++ + D +A+ WGG+ +AERR + + D + + +V +++ G+F + HRD++G++L +G++R ++GDI V G+RGAQV+ + A L ++ SVR TV P++EL+ + + K V SVE+SLRLDA+ S G+ MSR++ + ++ G+V N A+ S V+ D I+ RG G+L + ++ TK+ R+RV M R
Sbjct: 12 DKLLSQAMYGGVDKQVATRVLDAAASALRNWELMATDFLTPPEYNVMLNVLEGLVDLQAIAWGGHEEAERRRM-----FFAHDGVDMATSVAVGVVALEVGGQFLFDMADHRDYLGSILGTGIERQKVGDILV-QGERGAQVLCHPDIADYLCTNLSSVRSVTVKVDQVPLTELKVSPPIKKHVTSVEASLRLDAIASAGMGMSRSKMADAIKSGMVFVNWREAKGPSSEVKASDVITVRGKGRLEILEIHETKKERYRVVMNR 269
BLAST of Gchil3577.t1 vs. uniprot
Match: Q7NNM0_GLOVI (Gll0391 protein n=2 Tax=Gloeobacter TaxID=33071 RepID=Q7NNM0_GLOVI) HSP 1 Score: 149 bits (375), Expect = 6.620e-40 Identity = 97/248 (39.11%), Postives = 140/248 (56.45%), Query Frame = 0
Query: 41 MLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPIS--ELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
+L L+E A+R+ +++TS F +P E LD+ + + A WGGY AER+ + V + ++ A L V + G F + +HRDF+GA+L +G+ R ++GDI VL G RGAQ + E LQ S+ SVR TV +V PI EL KE+ SVE+SLR+DA+GS G +SR + + +E G V N SK V+ D I+ RG G+L V V TK+GR+RV M+R+
Sbjct: 23 VLDLAETALRDWSVVTSDFYSPPEVGECLDVFSRLVEVHAAAWGGYSQAERQRIAVS------RDNIAIETAAIPLAAVDIRGNFLFDAASHRDFLGAILGTGIVRGKVGDILVL-GDRGAQTLVAPELVPFLQTSLTSVR--TVPVQVVPIGFEELRIRPPQTKEITSVEASLRIDAIGSAGFGLSRNKMVESIEAGEVTLNWKTVTQPSKNVQTGDRITLRGRGRLEVGPVDTTKKGRYRVQMIRY 261
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A168U6V3_9CYAN (Photosystem II S4 domain protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A168U6V3_9CYAN) HSP 1 Score: 145 bits (367), Expect = 9.420e-39 Identity = 96/256 (37.50%), Postives = 146/256 (57.03%), Query Frame = 0
Query: 31 NNIEKMLA-QNMLALSERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMR 284
N++E A +L +E A++ I + FL+P E L+I + + RA+ WGGY AER+ L + + + LD AN E+V V++ G F + THRDF+GA+L +G+ R + GDI VL G+RGAQ I + L+ ++ VR V T+ ++EL KE+ +VE+S+RLDA+ S G MSR++ S L+ G V N A+ S V+ D I+ RG G+L V +V+ TK+ R+RV + R
Sbjct: 9 NSVENREAVAKILDRAEDALKTWEIAQTDFLSPPELMEALEIFSRLTEVRAVAWGGYPQAERQRLAIARS------ELPLDTANVEVVAVEIAGNFLFDTATHRDFLGAMLGTGIVREKTGDILVL-GERGAQAIVVPDLVEFLEMNLTQVRSVPVKTQAIALTELRVRPPKKKEMTTVEASMRLDAIASAGFGMSRSKMSSLISSGDVRVNWKEAKQSSYTVKSGDLIAIRGKGRLEVGEVAMTKKQRYRVQLTR 257
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A7S1U8M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8M0_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.490e-38 Identity = 92/240 (38.33%), Postives = 138/240 (57.50%), Query Frame = 0
Query: 48 AVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVED--EQRLLDAANHELVVVKLEGKFD-ERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMR 284
A+R + + FL P E +L++ + + D + GGY DAERR+L+VG ++ E+ L D A + V +EGKF+ + HRDF+G+VL G++R +GDI VL GAQV+ A +L+ S+ VR TVS + P+ EL K+V +VE+SLRLDAV SGG+ +SR S + + G + N A+ +K V D I+ RG G++ V D+ T +G+FR+ M R
Sbjct: 7 ALRTWEVGATKFLRPPEHRALLELFKPLSDVSCVAAGGYEDAERRVLLVGRPDVLDGLGEEALADDA---IAAVAIEGKFEFDAAGHRDFLGSVLKLGIEREFLGDIIVLPDGEGAQVVATPGVADMLEASLTRVRSVTVSCKRIPLDELRPQPLRRKDVTAVEASLRLDAVASGGMGISRGVASDMAKAGDILLNWRPAK-AAKEVASGDVITIRGAGRVEVHDIDLTAKGKFRIKMTR 242
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A1Z4JNZ0_LEPBY (RNA-binding protein S4 n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JNZ0_LEPBY) HSP 1 Score: 144 bits (362), Expect = 5.200e-38 Identity = 89/242 (36.78%), Postives = 139/242 (57.44%), Query Frame = 0
Query: 45 SERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
+E+A++ ++TS FL+P E + + + + + + WGGY AER+ L + + + LD + ELV + + G F + THRDF+GA+L +G+ R ++GDI VL G+RGAQ I E LQ ++ VR V T+ P EL+ + KE+ +VE+S+RLDA+ S G MSR++ + L+ G V N + S V+ D I+ RG G++ V DV TK+ R+RV + RF
Sbjct: 24 AEQAIKTWEVVTSDFLSPPELAEIQRSFSRLTEVQLLAWGGYPQAERQRLAIARS------EIPLDPSQVELVALDIAGNFLFDPATHRDFLGAILGTGIVRDKVGDIIVL-GERGAQAIVTPELGEFLQTALTQVRSVPVKTQPIPFEELKIREPKKKEITTVEASMRLDAIASAGFGMSRSKMADLITAGDVRVNWKEITSSSYSVKAGDLIAIRGKGRVEVGDVMVTKKDRYRVQLTRF 258
BLAST of Gchil3577.t1 vs. uniprot
Match: A0A8J8CIY6_9CYAN (Photosystem II S4 domain protein n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J8CIY6_9CYAN) HSP 1 Score: 142 bits (359), Expect = 1.450e-37 Identity = 91/242 (37.60%), Postives = 138/242 (57.02%), Query Frame = 0
Query: 45 SERAVRERTILTSHFLTPLESSCVLDIVRAIRDTRAMCWGGYGDAERRLLVVGCAYRVEDEQRLLDAANHELVVVKLEGKF-DERTTHRDFMGAVLSSGLDRSQIGDISVLDGQRGAQVITKGEAARILQGSVQSVRRATVSTRVEPISELEETQRVLKEVNSVESSLRLDAVGSGGLNMSRAQFSKLLEKGLVCHNQHVARNGSKRVEVDDTISARGVGKLRVQDVSRTKRGRFRVSMMRF 285
+E+A++ ++ S FLTP E + V + D + + WGGY AER L + + LD A EL ++L G F + +HRDF+GA+L +GL R ++GD+ VL G+RGAQVI E L+ S+Q VR + TR +SEL+ + KE+ +VE+S+RLDA+ S G MSR++ ++ G V N + S V+ D I+ RG G++ V +V TK+ R+RV + RF
Sbjct: 24 AEQAIKTWEVVQSDFLTPPEFAEVKQAFGRLTDVQLVPWGGYPQAERNRLAIARS------DLPLDTAQVELAALELAGNFLFDPASHRDFLGALLGTGLVREKVGDVIVL-GERGAQVIVVPELVEFLETSLQQVRSVPIKTRQIELSELKIREPKKKELMTVEASMRLDAIASAGFGMSRSKMVDIINSGDVRVNWKDISSSSHTVKAGDLIAIRGKGRVEVGEVMVTKKDRYRVQLTRF 258 The following BLAST results are available for this feature:
BLAST of Gchil3577.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil3577.t1 ID=Gchil3577.t1|Name=Gchil3577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=287bpback to top |