Gchil3560.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3560.t1
Unique NameGchil3560.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length276
Homology
BLAST of Gchil3560.t1 vs. uniprot
Match: A0A2V3IWY9_9FLOR (Zinc finger protein CONSTANS-LIKE 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWY9_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 5.020e-30
Identity = 82/137 (59.85%), Postives = 93/137 (67.88%), Query Frame = 0
Query:   22 APLFEPELASYAMQHVHMXXXXXXXXXXXXXXXQNGTHSQLVPSAASHSGCHSASDSTPAVPP--------IQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALA 150
            A L  P++++ A+QHVH         XXXXXXX     S L P+   H+  HS S  +P  PP        IQM+SAYRIGRYTPAERR+RLQRYREKRA RNYSRRVKYDCRKLIA KR RV GRFVKRE E+ LA
Sbjct:   78 ASLLSPDVSALALQHVHFHMLHLHAQXXXXXXXXXXXXSHLPPARVQHAAPHSPSAVSP--PPQQHHHLVQIQMQSAYRIGRYTPAERRLRLQRYREKRALRNYSRRVKYDCRKLIAQKRHRVQGRFVKRELEVELA 212          
BLAST of Gchil3560.t1 vs. uniprot
Match: A0A1Y1HZ49_KLENI (CCT domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZ49_KLENI)

HSP 1 Score: 68.9 bits (167), Expect = 1.540e-9
Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   91 YRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALASAQ 153
            +++GRYT  ER++R+QRYR+KR +RNY++++KY CRK +AD R R+ GRF K +    LA A+
Sbjct:  521 FKVGRYTIEERKMRIQRYRQKRNERNYNKKIKYVCRKTLADSRPRIRGRFAKNDEVPGLAEAK 583          
BLAST of Gchil3560.t1 vs. uniprot
Match: UPI001C52DFCC (uncharacterized protein LOC122094692 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C52DFCC)

HSP 1 Score: 68.2 bits (165), Expect = 1.790e-9
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   85 IQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKRE 144
            I  E+++++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV GRF + E
Sbjct:  235 ITEETSFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNE 294          
BLAST of Gchil3560.t1 vs. uniprot
Match: UPI000D1D0F74 (two-component response regulator-like PRR73 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0F74)

HSP 1 Score: 67.8 bits (164), Expect = 2.930e-9
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   86 QMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALASAQS 154
            Q E  ++IGRY+ AER+ R+ RYR+KR++RN+++++KY CRK +AD R RV GRF K E  +  + A S
Sbjct:  289 QDECGFKIGRYSLAERKERIHRYRQKRSERNFNKKIKYACRKTLADSRPRVRGRFAKNEDVVDSSVASS 357          
BLAST of Gchil3560.t1 vs. uniprot
Match: UPI001CC352D6 (uncharacterized protein LOC122665106 isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC352D6)

HSP 1 Score: 67.4 bits (163), Expect = 3.220e-9
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:   85 IQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKRE 144
            I  E+ +++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV GRF + E
Sbjct:  232 IMEETNFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNE 291          
BLAST of Gchil3560.t1 vs. uniprot
Match: UPI001CC61343 (uncharacterized protein LOC122665106 isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC61343)

HSP 1 Score: 67.4 bits (163), Expect = 3.250e-9
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:   85 IQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKRE 144
            I  E+ +++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV GRF + E
Sbjct:  232 IMEETNFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNE 291          
BLAST of Gchil3560.t1 vs. uniprot
Match: A0A7J8TI95_GOSDV (CCT domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J8TI95_GOSDV)

HSP 1 Score: 65.5 bits (158), Expect = 4.310e-9
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   91 YRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALASAQSQRARCRTATAPDEPSHAVREV 175
            ++IGRY P ER+ R+ +YR KR QRN+++R+KY CRK IAD R R+ GRF + +  + +     Q+A C T    +    A+ EV
Sbjct:  107 FKIGRYNPEERQERISKYRAKRNQRNFNKRIKYACRKTIADNRPRIRGRFARNDETVEI-----QKAPCSTRHEEEFELWALHEV 186          
BLAST of Gchil3560.t1 vs. uniprot
Match: D8QQ86_SELML (RING-type E3 ubiquitin transferase n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QQ86_SELML)

HSP 1 Score: 67.8 bits (164), Expect = 4.790e-9
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   88 ESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKRE 144
            + A ++GRY+P ER+VR+ RYR+KR++RNY +++KY CRK +AD R R+ GRF K +
Sbjct: 2065 DPAMKVGRYSPEERKVRIDRYRQKRSERNYIKKIKYACRKTLADSRPRIRGRFAKNQ 2121          
BLAST of Gchil3560.t1 vs. uniprot
Match: A0A0D2QKB4_GOSRA (CCT domain-containing protein n=18 Tax=Gossypium TaxID=3633 RepID=A0A0D2QKB4_GOSRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.700e-9
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   85 IQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALASAQSQRARCRTATAPDEPSHAVREV 175
            +  +  ++IGRY P ER+ R+ +YR KR QRN+++R+KY CRK IAD R R+ GRF + +  + +     Q+A C T    +    A+ EV
Sbjct:  165 LMKKPGFKIGRYNPEERQERISKYRAKRNQRNFNKRIKYACRKTIADNRPRIRGRFARNDETVEI-----QKAPCSTRHEEEFELWALHEV 250          
BLAST of Gchil3560.t1 vs. uniprot
Match: A0A835Y768_9CHLO (CCT domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y768_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 1.010e-8
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   77 DSTPAVPPIQMESAYRIGRYTPAERRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALASAQSQRA 157
            D  P    I  E    IGR TP ER  R+ RYR KRAQRN++R +KY CRK +AD R RV GRF + E   A+   Q+++A
Sbjct:  460 DPDPLPASIPEEGTKLIGRLTPEERLQRILRYRSKRAQRNFNREIKYQCRKTLADSRPRVGGRFARNEDPNAVMPHQTKKA 540          
The following BLAST results are available for this feature:
BLAST of Gchil3560.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWY9_9FLOR5.020e-3059.85Zinc finger protein CONSTANS-LIKE 16 n=1 Tax=Graci... [more]
A0A1Y1HZ49_KLENI1.540e-950.79CCT domain-containing protein n=1 Tax=Klebsormidiu... [more]
UPI001C52DFCC1.790e-951.67uncharacterized protein LOC122094692 n=1 Tax=Macad... [more]
UPI000D1D0F742.930e-949.28two-component response regulator-like PRR73 n=2 Ta... [more]
UPI001CC352D63.220e-951.67uncharacterized protein LOC122665106 isoform X2 n=... [more]
UPI001CC613433.250e-951.67uncharacterized protein LOC122665106 isoform X1 n=... [more]
A0A7J8TI95_GOSDV4.310e-942.35CCT domain-containing protein n=4 Tax=Gossypium Ta... [more]
D8QQ86_SELML4.790e-952.63RING-type E3 ubiquitin transferase n=4 Tax=Selagin... [more]
A0A0D2QKB4_GOSRA6.700e-939.56CCT domain-containing protein n=18 Tax=Gossypium T... [more]
A0A835Y768_9CHLO1.010e-848.15CCT domain-containing protein n=1 Tax=Edaphochlamy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 101..143
e-value: 3.8E-13
score: 49.3
IPR010402CCT domainPROSITEPS51017CCTcoord: 101..143
score: 14.048595
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..82
NoneNo IPR availablePANTHERPTHR31319:SF73CCT MOTIF FAMILY PROTEINcoord: 39..163
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 39..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004378_piloncontigtig00004378_pilon:1345423..1346250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3560.t1Gchil3560.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004378_pilon 1345423..1346250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3560.t1 ID=Gchil3560.t1|Name=Gchil3560.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=276bp
MMQPAAQPRGVALGGVSALSGAPLFEPELASYAMQHVHMHMHMMQHQQHQ
QQPQQNGTHSQLVPSAASHSGCHSASDSTPAVPPIQMESAYRIGRYTPAE
RRVRLQRYREKRAQRNYSRRVKYDCRKLIADKRRRVHGRFVKREHELALA
SAQSQRARCRTATAPDEPSHAVREVIELGALTTHPPDIRHLHHVVSVDAV
PFGDHVSHMHAVHHNVPDVHNVHDINHVDHVDHVADVHSALLHSCPSASA
AAPCDASPRDCEAATRTHDVLHHLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like