Gchil6831.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6831.t2
Unique NameGchil6831.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length437
Homology
BLAST of Gchil6831.t2 vs. uniprot
Match: R7Q1Y8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1Y8_CHOCR)

HSP 1 Score: 332 bits (850), Expect = 2.450e-102
Identity = 192/442 (43.44%), Postives = 284/442 (64.25%), Query Frame = 0
Query:    7 ISPTTKN-DRKMSNAPLDGRETRRYGKKEC------RLESMTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKH-HTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPKAPRRVMDFSSIERK-AVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEVLEDQIRNLLETLHIENTHEERADSDIATNPGLR---FFGTLCVLEKGRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCG--EGDIVSKCLEAISDFHISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYCCMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWEVTASLDSILTGETRSELRAELKRLLRSGTAPPPP 434
            + P +KN DR    +P+  R T R  + +       RLESMTD+DQE VFR HLRQ+E +V YKDDYY+ +  +  R    ++Y+DLA+ V  +R R++ RG      R R +K  +  ++++Q +S    SD +   LA ALG+VQ+W+P+APRRVMDF  +E++    G   K LRDDERV VR EIERGYD++A IHDI RGES + L   I+ L+ TLH+    E+  D D     G+R   FF T+CV+EKGRRYL+ V ++++  +++R + ++FE+LG+++++ ++S      G  +  + +  ++ + D  I A DC+A+ +SFS++H    DAFLTTFRS  GAK+++ CMQR+S GL    IGEED+S SG+    + +TE L  +F+GAE  +RVWE  ASLD++  G+TR+  R+EL RL+ +GT P PP
Sbjct:  383 LGPNSKNTDRDTFGSPV--RRTERSPQAQVKKTSQRRLESMTDRDQEWVFRAHLRQIETSVVYKDDYYNSVLTKKLRESNPDIYADLAERVQALRVRDKERGAYGNSMRIRGSKRGNAGKDDSQLASSAHHSDQNTRALANALGTVQSWHPRAPRRVMDFGLLEKRDTADGLPQKSLRDDERVHVRQEIERGYDIIATIHDIARGESHKSLGPTIQTLMSTLHLA---EKMGDEDRGERDGVRSTRFFATMCVIEKGRRYLSHVLELVEDGDKVRAMCAIFENLGMLVFASRKSSGKATIGGSQKGLFAIMMKIVQDPDIRAQDCLAIFNSFSTSHVPHRDAFLTTFRSGVGAKIVFLCMQRISAGLAMHVIGEEDISASGIDGFTQGFTEALPDVFKGAESESRVWEAMASLDALSRGDTRATYRSELHRLMLAGTVPNPP 819          
BLAST of Gchil6831.t2 vs. uniprot
Match: A0A5J4Z7F6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7F6_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 1.920e-8
Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 0
Query:   30 YGKKECR--LESMTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKHHTQQNENQASSPV-----QSSDSSKNG--LATALGSVQTWNPKAPRRVMDFSSIERKA------------------------------VKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEVL 208
            YG+ E    L  MT +D + V RVHLRQ+E    Y DDYY   +     L + +L   +A + +     N+ R                Q+    A+ PV     + + S++N   L+TALG+++TW PKAPR+++  S   R A                              +K +   LLR+DERV+ R  IE GYD+ A + DI RG+ + ++
Sbjct:  186 YGRDENSFPLIGMTARDLDTVVRVHLRQLETQDDYVDDYYLLQFCARNNLSVDDLQVRMAVSSSFSNFVNRARAAA------------LQRASEGAAQPVTDATLKEAHSARNIELLSTALGTLRTWTPKAPRKLVSVSDEGRSADADDAAALSSLNPLAGLASLGGTLEKRRAVLKQNSVALLREDERVRARSLIEAGYDIFAELRDIERGQLTGIV 391          
BLAST of Gchil6831.t2 vs. uniprot
Match: M2XKF2_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKF2_GALSU)

HSP 1 Score: 67.0 bits (162), Expect = 3.280e-8
Identity = 99/411 (24.09%), Postives = 178/411 (43.31%), Query Frame = 0
Query:   40 MTDKDQELVFRVHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLRGTNSRPHRSRRTKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPKAPRRVMDF-------SSIERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESS--EVLEDQI---RNLLETLHI---ENTHEERADSDIATNPGLRFFGTLCVLEKGRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIVSKCLEAISDFHISAADCIAMLS----SFSSTHSARPDAFLTTFRSASGAKLMYCCMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNR------VWEVTASLDSILTGETRSELRAELKRLL 425
            MT  + EL+ ++H+RQ+E +    +D+Y   YR+ E+           ++  Q+++    R T  +  RS    HH++ N                 L  ALGS+Q +NP APRR++         SS+ER     +++    +D R+  +  I   +D++  + D +   SS  E+ E +    R LL T  I   EN  +E  +           F  +C L KGR+ L R F +L  +    ++  +  SLG++   L+R+ ++ +  E     + +E++  F I   D I++L+    SF+  H    + FL    + S   L+   +               D SR    K+  +   + +R+    E + +      VW++ A LD  +    R +LR  +K+L+
Sbjct:  283 MTCSEIELIAKMHIRQLETSSWPVEDFYCQAYRQKEQ----------RRSEEQLKEYPYSRDTKKKTLRSGYFPHHSENN--------------LKILERALGSIQGYNPNAPRRMVQVALESVSDSSLERDEAHVTDTPF-HEDSRIAAQSVISLAFDILFDLEDELSVYSSVAELEEHKTKMSRKLLNTFGITVDENLRDETRN----------IFSRICALPKGRKLLIRCFSVLPRTYLTPLLNMILFSLGMI---LKRTSKAQL--EEPSWQQFVESVMHF-IEETDDISVLTEWTHSFAVGHQENKN-FLFVITTGSSLSLVVTLLFSAC---------SLDSSRQPPLKM--LLNRLCERLILSVEEMFKHVEHSIVWQLVALLDGFVDTMLREKLRMIIKKLI 640          
BLAST of Gchil6831.t2 vs. uniprot
Match: A0A7S1XJK5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XJK5_9RHOD)

HSP 1 Score: 60.5 bits (145), Expect = 3.870e-6
Identity = 85/324 (26.23%), Postives = 141/324 (43.52%), Query Frame = 0
Query:   39 SMTDKDQELVFRVHLRQVEAAVTYKDDYY-------HGM----YRRNERLGLGELYSDLAKNVNQ-----------MRQRNQLRGTNSRPHRSRRTKHHTQQNE---------NQASSPVQSSD-------SSKNGLATALGSVQTWNPKAPRRVMDFSSI------------ERKAV-----------------KGSESKLLRDDERVKVRHEIERGYDVMAVIHDIVRGESSEV---LEDQIRNLLETLHIENTHEERADSDIATNPGLRFFGTLCVLEKGRRYLARVFDIL-DISERIRVIPSVFESLGVMIYSLQRSRRS 291
            +MT +D E+V R+HLRQ+E++ + +D++Y       HG     ++      LG L S L+ N  +             +RN L G ++    S     H++  E         N A S  Q +D       S+   L+ +LG++Q+W P APRR+++  S             ER+AV                 + + ++ L +DER+  R  IERGYD++A + D  +G S E    L D  R   + L+     +E    ++       FF  + +LEKGR  +  + ++L ++         V E+L     S  R R+S
Sbjct:  123 AMTARDVEIVLRMHLRQLESSDSPRDNFYSNTFCAKHGASTCDFQGTMNTYLGALPS-LSSNSGRPPYSSSSGRAGADERNSLSGDSNAASAS-----HSRPGEQTGGGGVAGNDAKSKTQDADRPRPHTASNLTVLSKSLGTLQSWTPNAPRRILEVQSASKASASALASADEREAVTRRALDMRHAARDAADGRATGAQPLANDERIIARIAIERGYDLLADLADARKGRSGESGTSLGDLERRTADALYALLQLDEPDGINV-------FFLRIVLLEKGRALVTALLELLSELCTESEATDDVAEALDRADLSESRIRKS 433          
The following BLAST results are available for this feature:
BLAST of Gchil6831.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7Q1Y8_CHOCR2.450e-10243.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z7F6_PORPP1.920e-829.82Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2XKF2_GALSU3.280e-824.09Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S1XJK5_9RHOD3.870e-626.23Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..146
IPR039900Pat1-likePANTHERPTHR21551TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1coord: 37..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:225618..226928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2Gchil6831.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 225618..226928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=437bp
MESGIDISPTTKNDRKMSNAPLDGRETRRYGKKECRLESMTDKDQELVFR
VHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLR
GTNSRPHRSRRTKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPK
APRRVMDFSSIERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIV
RGESSEVLEDQIRNLLETLHIENTHEERADSDIATNPGLRFFGTLCVLEK
GRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIV
SKCLEAISDFHISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYC
CMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWE
VTASLDSILTGETRSELRAELKRLLRSGTAPPPPQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039900Pat1-like