Gchil6831.t2 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6831.t2
Unique NameGchil6831.t2
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length437
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:225618..226928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6831Gchil6831Gracilaria chilensis NLEC103_M9 malegenetig00004376_pilon 224601..226928 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2.start1Gchil6831.t2.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004376_pilon 225618..225620 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2.CDS1Gchil6831.t2.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004376_pilon 225618..226928 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2.exon1Gchil6831.t2.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004376_pilon 225618..226928 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2.stop1Gchil6831.t2.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004376_pilon 226926..226928 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6831.t2Gchil6831.t2Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004376_pilon 225618..226928 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=437bp
MESGIDISPTTKNDRKMSNAPLDGRETRRYGKKECRLESMTDKDQELVFR
VHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLR
GTNSRPHRSRRTKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPK
APRRVMDFSSIERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIV
RGESSEVLEDQIRNLLETLHIENTHEERADSDIATNPGLRFFGTLCVLEK
GRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIV
SKCLEAISDFHISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYC
CMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWE
VTASLDSILTGETRSELRAELKRLLRSGTAPPPPQR*
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spliced messenger RNA

>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1311bp|location=Sequence derived from alignment at tig00004376_pilon:225618..226928+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAATCAGGAATAGACATCTCGCCTACAACAAAAAATGACAGGAAAAT
GAGTAACGCTCCCCTCGATGGAAGGGAAACCAGAAGATACGGGAAGAAAG
AATGCCGTCTCGAATCTATGACTGATAAGGATCAAGAATTAGTTTTCAGA
GTGCATCTGAGACAAGTGGAAGCGGCAGTCACATACAAGGATGATTATTA
CCATGGCATGTATCGCAGAAACGAACGGTTGGGTTTAGGAGAACTGTATT
CAGATCTGGCTAAGAACGTCAACCAGATGAGACAAAGAAATCAATTACGC
GGGACGAACAGCCGCCCTCATAGGAGTCGTCGAACGAAACACCACACGCA
GCAAAATGAAAACCAGGCATCTTCACCAGTGCAGTCTAGTGACTCCTCAA
AAAATGGGTTGGCGACAGCACTCGGATCAGTTCAAACATGGAATCCTAAA
GCCCCAAGAAGGGTTATGGACTTTAGCTCGATCGAACGAAAAGCCGTTAA
AGGATCTGAATCAAAGCTTCTCCGAGACGATGAGCGAGTGAAAGTACGAC
ATGAAATTGAGAGAGGATACGATGTCATGGCTGTTATTCACGACATAGTT
AGAGGCGAAAGCTCGGAAGTCTTAGAAGATCAAATTCGAAACCTCCTCGA
GACGTTACACATTGAAAACACTCATGAAGAAAGGGCAGATTCAGACATCG
CAACAAACCCAGGACTTCGATTCTTTGGCACCCTTTGCGTTTTAGAGAAA
GGTAGACGTTATTTGGCGAGAGTATTTGACATACTTGACATATCGGAAAG
AATTCGGGTTATACCATCGGTATTTGAAAGCCTAGGGGTAATGATATATT
CCCTTCAACGCTCACGACGGTCTTATATGTGTGGGGAAGGTGATATTGTA
TCCAAATGTCTTGAGGCAATAAGTGACTTCCATATATCTGCGGCCGATTG
CATTGCTATGCTTAGCTCATTCAGTTCCACCCACTCAGCTCGTCCTGATG
CCTTCCTCACCACTTTTCGAAGTGCATCTGGCGCAAAGCTCATGTACTGT
TGTATGCAAAGGGTGTCGAGGGGTTTATTTAAAAAAGAAATAGGTGAGGA
GGATGTGAGTCGATCTGGAGTCTGTAAGCTCGCGAAGGTATATACTGAAA
TGTTACAACGCATATTTGAGGGAGCAGAACTTGTAAACAGGGTGTGGGAA
GTGACGGCAAGTCTCGACAGTATTCTTACCGGCGAGACAAGATCAGAGCT
TCGTGCAGAGCTTAAGCGACTGTTGCGAAGTGGAACCGCACCCCCACCCC
CACAAAGATAG
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protein sequence of Gchil6831.t2

>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=437bp
MESGIDISPTTKNDRKMSNAPLDGRETRRYGKKECRLESMTDKDQELVFR
VHLRQVEAAVTYKDDYYHGMYRRNERLGLGELYSDLAKNVNQMRQRNQLR
GTNSRPHRSRRTKHHTQQNENQASSPVQSSDSSKNGLATALGSVQTWNPK
APRRVMDFSSIERKAVKGSESKLLRDDERVKVRHEIERGYDVMAVIHDIV
RGESSEVLEDQIRNLLETLHIENTHEERADSDIATNPGLRFFGTLCVLEK
GRRYLARVFDILDISERIRVIPSVFESLGVMIYSLQRSRRSYMCGEGDIV
SKCLEAISDFHISAADCIAMLSSFSSTHSARPDAFLTTFRSASGAKLMYC
CMQRVSRGLFKKEIGEEDVSRSGVCKLAKVYTEMLQRIFEGAELVNRVWE
VTASLDSILTGETRSELRAELKRLLRSGTAPPPPQR*
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mRNA from alignment at tig00004376_pilon:225618..226928+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1311bp|location=Sequence derived from alignment at tig00004376_pilon:225618..226928+ (Gracilaria chilensis NLEC103_M9 male)
ATGGAATCAGGAATAGACATCTCGCCTACAACAAAAAATGACAGGAAAAT
GAGTAACGCTCCCCTCGATGGAAGGGAAACCAGAAGATACGGGAAGAAAG
AATGCCGTCTCGAATCTATGACTGATAAGGATCAAGAATTAGTTTTCAGA
GTGCATCTGAGACAAGTGGAAGCGGCAGTCACATACAAGGATGATTATTA
CCATGGCATGTATCGCAGAAACGAACGGTTGGGTTTAGGAGAACTGTATT
CAGATCTGGCTAAGAACGTCAACCAGATGAGACAAAGAAATCAATTACGC
GGGACGAACAGCCGCCCTCATAGGAGTCGTCGAACGAAACACCACACGCA
GCAAAATGAAAACCAGGCATCTTCACCAGTGCAGTCTAGTGACTCCTCAA
AAAATGGGTTGGCGACAGCACTCGGATCAGTTCAAACATGGAATCCTAAA
GCCCCAAGAAGGGTTATGGACTTTAGCTCGATCGAACGAAAAGCCGTTAA
AGGATCTGAATCAAAGCTTCTCCGAGACGATGAGCGAGTGAAAGTACGAC
ATGAAATTGAGAGAGGATACGATGTCATGGCTGTTATTCACGACATAGTT
AGAGGCGAAAGCTCGGAAGTCTTAGAAGATCAAATTCGAAACCTCCTCGA
GACGTTACACATTGAAAACACTCATGAAGAAAGGGCAGATTCAGACATCG
CAACAAACCCAGGACTTCGATTCTTTGGCACCCTTTGCGTTTTAGAGAAA
GGTAGACGTTATTTGGCGAGAGTATTTGACATACTTGACATATCGGAAAG
AATTCGGGTTATACCATCGGTATTTGAAAGCCTAGGGGTAATGATATATT
CCCTTCAACGCTCACGACGGTCTTATATGTGTGGGGAAGGTGATATTGTA
TCCAAATGTCTTGAGGCAATAAGTGACTTCCATATATCTGCGGCCGATTG
CATTGCTATGCTTAGCTCATTCAGTTCCACCCACTCAGCTCGTCCTGATG
CCTTCCTCACCACTTTTCGAAGTGCATCTGGCGCAAAGCTCATGTACTGT
TGTATGCAAAGGGTGTCGAGGGGTTTATTTAAAAAAGAAATAGGTGAGGA
GGATGTGAGTCGATCTGGAGTCTGTAAGCTCGCGAAGGTATATACTGAAA
TGTTACAACGCATATTTGAGGGAGCAGAACTTGTAAACAGGGTGTGGGAA
GTGACGGCAAGTCTCGACAGTATTCTTACCGGCGAGACAAGATCAGAGCT
TCGTGCAGAGCTTAAGCGACTGTTGCGAAGTGGAACCGCACCCCCACCCC
CACAAAGATAG
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Coding sequence (CDS) from alignment at tig00004376_pilon:225618..226928+

>Gchil6831.t2 ID=Gchil6831.t2|Name=Gchil6831.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1311bp|location=Sequence derived from alignment at tig00004376_pilon:225618..226928+ (Gracilaria chilensis NLEC103_M9 male)
ATGGAATCAGGAATAGACATCTCGCCTACAACAAAAAATGACAGGAAAAT
GAGTAACGCTCCCCTCGATGGAAGGGAAACCAGAAGATACGGGAAGAAAG
AATGCCGTCTCGAATCTATGACTGATAAGGATCAAGAATTAGTTTTCAGA
GTGCATCTGAGACAAGTGGAAGCGGCAGTCACATACAAGGATGATTATTA
CCATGGCATGTATCGCAGAAACGAACGGTTGGGTTTAGGAGAACTGTATT
CAGATCTGGCTAAGAACGTCAACCAGATGAGACAAAGAAATCAATTACGC
GGGACGAACAGCCGCCCTCATAGGAGTCGTCGAACGAAACACCACACGCA
GCAAAATGAAAACCAGGCATCTTCACCAGTGCAGTCTAGTGACTCCTCAA
AAAATGGGTTGGCGACAGCACTCGGATCAGTTCAAACATGGAATCCTAAA
GCCCCAAGAAGGGTTATGGACTTTAGCTCGATCGAACGAAAAGCCGTTAA
AGGATCTGAATCAAAGCTTCTCCGAGACGATGAGCGAGTGAAAGTACGAC
ATGAAATTGAGAGAGGATACGATGTCATGGCTGTTATTCACGACATAGTT
AGAGGCGAAAGCTCGGAAGTCTTAGAAGATCAAATTCGAAACCTCCTCGA
GACGTTACACATTGAAAACACTCATGAAGAAAGGGCAGATTCAGACATCG
CAACAAACCCAGGACTTCGATTCTTTGGCACCCTTTGCGTTTTAGAGAAA
GGTAGACGTTATTTGGCGAGAGTATTTGACATACTTGACATATCGGAAAG
AATTCGGGTTATACCATCGGTATTTGAAAGCCTAGGGGTAATGATATATT
CCCTTCAACGCTCACGACGGTCTTATATGTGTGGGGAAGGTGATATTGTA
TCCAAATGTCTTGAGGCAATAAGTGACTTCCATATATCTGCGGCCGATTG
CATTGCTATGCTTAGCTCATTCAGTTCCACCCACTCAGCTCGTCCTGATG
CCTTCCTCACCACTTTTCGAAGTGCATCTGGCGCAAAGCTCATGTACTGT
TGTATGCAAAGGGTGTCGAGGGGTTTATTTAAAAAAGAAATAGGTGAGGA
GGATGTGAGTCGATCTGGAGTCTGTAAGCTCGCGAAGGTATATACTGAAA
TGTTACAACGCATATTTGAGGGAGCAGAACTTGTAAACAGGGTGTGGGAA
GTGACGGCAAGTCTCGACAGTATTCTTACCGGCGAGACAAGATCAGAGCT
TCGTGCAGAGCTTAAGCGACTGTTGCGAAGTGGAACCGCACCCCCACCCC
CACAAAGATAG
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