Gchil7424.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7424.t1
Unique NameGchil7424.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length245
Homology
BLAST of Gchil7424.t1 vs. uniprot
Match: A0A2V3J5X5_9FLOR (rRNA biogenesis protein RRP36 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X5_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 1.670e-87
Identity = 144/232 (62.07%), Postives = 179/232 (77.16%), Query Frame = 0
Query:    8 LVPRGSSR--EEPTLGEVLQSKEKSARGKAEYASHS-ILRKLARGIEFAPRSIKERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVKKNPEDYDASHELKSMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRP 236
            +VP  +S   EE T+GE+LQ KEK +       +HS    +   G E  P+S   R KKSRPREISSR PVPVGRERCLGID+G   SRS++KFDPRFEEHCG+L E H+ERNYAF++S++ SE+K LE  VK NP D +A  +L+SMEQ E+RR A+ RRR+I+  ++K EKEAVKRGKQPYFLKEKD+R LE++AKF++LKK GG+K+YIQKRRKRL GKD+KLLPNRRP
Sbjct:    3 MVPNATSSGDEEETMGEILQ-KEKPSYEHGNALTHSGRYGRFTSGSERPPKSTSTRKKKSRPREISSRRPVPVGRERCLGIDSGVEHSRSVKKFDPRFEEHCGELREGHIERNYAFIQSLRASERKQLENAVKANPIDEEALGKLRSMEQDEVRRRAIERRRDIMKNFRKEEKEAVKRGKQPYFLKEKDIRKLEVKAKFDDLKKKGGIKKYIQKRRKRLTGKDRKLLPNRRP 233          
BLAST of Gchil7424.t1 vs. uniprot
Match: UPI001BB2C484 (ribosomal RNA processing protein 36 homolog n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C484)

HSP 1 Score: 103 bits (257), Expect = 3.220e-23
Identity = 70/181 (38.67%), Postives = 102/181 (56.35%), Query Frame = 0
Query:   59 ERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVKKNPEDYDASHELK------SMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPN 233
            +R  K+RPRE SS+ PV   R       N     + + + DPRF++  GD  EE  E+NY F+  I+  EK  LE+ +K   E  D   +LK       +EQ E  +N     + +   Y + EKE VK+GK+P+FLK+ D R LE+  KF+ LK++G V  Y+ KRRK+ A KD+K +P+
Sbjct:   66 KRANKNRPREESSKKPVSRFR-------NVVEVKKQMAR-DPRFDDLSGDFREETFEKNYQFLSDIKEREKGELEKSMK---ETNDPQKQLKIQRYLYKLEQQERAKNKKNSAKELEKKYMRKEKELVKQGKKPFFLKKSDRRKLELAEKFKALKRSGKVDNYLAKRRKKNAQKDRKKMPS 235          
BLAST of Gchil7424.t1 vs. uniprot
Match: A0A022QQH0_ERYGU (rRNA biogenesis protein RRP36 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QQH0_ERYGU)

HSP 1 Score: 102 bits (254), Expect = 9.810e-23
Identity = 75/190 (39.47%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   54 PRSIKERGK--KSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFV-RSIQNSEKKSLEEKVKKNPEDYDASHELK---SMEQSEIRRNALLRRRN-ILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRP 236
            P S K+ G+  K+RP EISS+ PV   RE          Q       DPRFE  CG+L  +  ++ Y F+  +   +EK+ L++++KK  +D +A +ELK   S    E++  A  R  N IL+ +KK E+EA K+GKQPY+LK+ D+R  ++  K+ ELK++G ++ +I+K+RK+ A KD+K +P RRP
Sbjct:   60 PNSDKKAGRVNKNRPMEISSKKPVSRFRE--------VIQVPKKVVRDPRFESLCGELNVDGFKKRYNFIYENTLPAEKQELKKRMKK-VKDPEAVNELKDQISRIDKELKSAAPKRTENDILAEHKKKEREAAKKGKQPYYLKKSDIRKQKLIEKYNELKESGKLEAFIEKKRKKNAAKDQKYMPYRRP 240          
BLAST of Gchil7424.t1 vs. uniprot
Match: A0A2B4RGF2_STYPI (rRNA biogenesis protein RRP36 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RGF2_STYPI)

HSP 1 Score: 102 bits (253), Expect = 1.590e-22
Identity = 71/219 (32.42%), Postives = 122/219 (55.71%), Query Frame = 0
Query:   22 EVLQSKEKSARGKAEYASHSILRKLARGIEFAPRSIKERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVKKNPED---YDASHELKSMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRPL 237
            E+ + K K    +   A H +  K    +    +S+K R  K+RPRE+SS+ PVP  R+            +     DPRF+E  G   +E  ++ Y+F+  ++ +EKK L+++V+K  +          LK M+Q E  + A  ++R++    KK E E VK+GK PY+LK+ D + LE+  KF++LK +G +++Y++KR K+   K++K +P+RR +
Sbjct:   45 ELEELKHKVGSKRYNEAIHGLFDKKGTNVT---KSLK-RENKNRPRELSSKKPVPRLRQ--------VIPVKKKMARDPRFDELSGTFNQEMFDKAYSFLDDVKANEKKKLQKEVQKTKQPERKLQLESLLKRMDQQEATKKAAAQKRDVERKRKKAELELVKQGKTPYYLKKSDKKKLELAEKFKKLKSSGKLEQYLKKRGKKNTSKERKKMPHRRVM 251          
BLAST of Gchil7424.t1 vs. uniprot
Match: UPI001CB8CD46 (ribosomal RNA processing protein 36 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8CD46)

HSP 1 Score: 100 bits (249), Expect = 5.350e-22
Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 0
Query:   59 ERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVK--KNPEDYDA--------SHELKSMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRPLSN 239
            +R  K+RP EISS+ PV   RE          Q+      DPRFE  CG L E+  ++ Y F   + + EKK LEE+++  KNPE  D         + +LK+     I +        IL  +KK E+EA K+GKQPY+LK+ ++R  ++  KF+ELK +G +  +I+K+RK+ A KD K +P RRP  N
Sbjct:   71 KRENKNRPMEISSKKPVGRFRE--------VIQAPKKVIRDPRFESLCGTLDEDGFKKRYNF---LYDDEKKRLEEQMERTKNPEVLDGLKGQLAWINKQLKAESTKHISKE-------ILVKHKKKEREAAKQGKQPYYLKKSEIRKQQLAEKFKELKASGKLNSFIEKKRKKNAAKDHKFMPYRRPNDN 243          
BLAST of Gchil7424.t1 vs. uniprot
Match: A0A830BE02_9LAMI (rRNA biogenesis protein RRP36 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BE02_9LAMI)

HSP 1 Score: 98.6 bits (244), Expect = 2.580e-21
Identity = 70/183 (38.25%), Postives = 114/183 (62.30%), Query Frame = 0
Query:   60 RGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFV-RSIQNSEKKSLEEKVKKNPEDYDASHELK---SMEQSEIRRNALLRR--RNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRP 236
            R  K+RP EISS+ PV   RE          Q       DPRFE  CG L  +  ++ Y F+  +   +EK+ L++++KK   D +A +ELK   ++   EI+ +A+++R  ++IL+ +KK E+EA K+GKQPY+LK+ D+R  ++  K+ ELK++G ++ +I+K+RK+ A KD + +P RRP
Sbjct:   67 RANKNRPMEISSKKPVSRFRE--------VIQVPKKVVRDPRFESLCGTLNVDGFKQRYNFIYENALPAEKEELKKQMKKT-NDPEAVNELKGRVALIDKEIK-SAVIKRTEKDILAEHKKKEREAAKKGKQPYYLKKSDLRKQKLIEKYNELKESGKLESFIEKKRKKNAAKDHRYIPYRRP 239          
BLAST of Gchil7424.t1 vs. uniprot
Match: A0A5J4YUH1_PORPP (rRNA biogenesis protein RRP36 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUH1_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 3.570e-21
Identity = 62/171 (36.26%), Postives = 100/171 (58.48%), Query Frame = 0
Query:   66 PREISSRAPVP-VGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVKK--NPEDYDA-SHELKSMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLP 232
            P E+S+RA    +GR+    I          ++ DPRF E+ G L   H+   Y FV  I+  E ++L+ ++++  NP+  D    +L ++ Q+E RR A +R   +    ++ EK  V +GK PYF K+  V+ L+++AKF+ELKKTG +K+++ K+RK    K+KKLLP
Sbjct:  101 PVELSARARTQYLGRDAKNEIQLKVPARAVAKRVDPRFVEYTGRLSSAHIRNAYGFVEQIREQEIETLQTELRRTRNPQSKDTLKQQLDALLQAEARRKARMRDEQVEHELREKEKLLVMQGKTPYFAKKGVVKELQLKAKFDELKKTGKLKKFVNKKRKARESKEKKLLP 271          
BLAST of Gchil7424.t1 vs. uniprot
Match: S8C150_9LAMI (rRNA biogenesis protein RRP36 n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C150_9LAMI)

HSP 1 Score: 97.8 bits (242), Expect = 5.030e-21
Identity = 71/182 (39.01%), Postives = 112/182 (61.54%), Query Frame = 0
Query:   60 RGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFV-RSIQNSEKKSLEEKVK--KNPEDYDASHELKSMEQSEIRRNALLRR--RNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRP 236
            R  K+RP EISS+ PV   RE    I    + SR     DPRFE  CG L  +  ++ Y F+  +   SEKK L++ ++  KNPE  D   +  +    E++ +AL +R  ++ILS +KK E+EA KRGKQP++LK+ ++R  ++  K+ ELK++G ++ +++KRR++ A K+ + LP RRP
Sbjct:   69 RANKNRPMEISSKKPVSRFRE---VIQVPKNVSR-----DPRFESLCGKLDVDGFKKRYNFIYENTLPSEKKELKKLMRNAKNPEVVDELKDKMAKIDKEVK-SALPKRTEKDILSEHKKKEREAAKRGKQPFYLKKSELRKQKLIEKYNELKESGKLEAFMEKRRRKNASKEHRYLPYRRP 241          
BLAST of Gchil7424.t1 vs. uniprot
Match: UPI0011DF4F26 (ribosomal RNA processing protein 36 homolog isoform X1 n=2 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011DF4F26)

HSP 1 Score: 96.3 bits (238), Expect = 2.290e-20
Identity = 74/206 (35.92%), Postives = 121/206 (58.74%), Query Frame = 0
Query:   39 SHSILRKLARGIEFAPRSIKERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQ-NSEKKSLEEKVKKNPEDYDASHELK---SMEQSEIRRNALLRRRN-ILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRPLSN 239
            SHS+ RK  +  +        R  K+RP E+S + PV  GR R    D      + LR  DPRFE  CG L  +  ++ Y F+   +  +EK+ L +++KK+  D +   ELK   S    +++ ++   R N IL+ +K+ E+EAVK+GK+P++LK+ DVR   +  K+E+L+ +G ++ YI+KRRK+ A KD++ +P R+P+ N
Sbjct:   60 SHSVSRKDNKEKKVG------RANKNRPMEVSCKKPV--GRFR----DVVQAPKKVLR--DPRFESLCGTLDNDGFKKRYNFLFEEELPAEKEELRKQLKKSS-DPEVVEELKNQLSWINKQLKPDSTKHRENAILAEHKRKEREAVKQGKKPFYLKKSDVRKQRLLEKYEQLQGSGKLEAYIEKRRKKNAAKDQRYMPYRKPMEN 250          
BLAST of Gchil7424.t1 vs. uniprot
Match: UPI000C1D3545 (ribosomal RNA processing protein 36 homolog isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D3545)

HSP 1 Score: 95.9 bits (237), Expect = 2.680e-20
Identity = 72/222 (32.43%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   25 QSKEKSARGKAEYASHSILRKLARGIEFAPRSIK-----ERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDPRFEEHCGDLLEEHVERNYAFVRSIQ-NSEKKSLEEKVKKNPEDYDASHELKS--MEQSEIRRNALLRRRN--ILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMRAKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRP 236
            + +E+  R  A+     +LR  + G E   R         R  K+RP E+SS+ PV   RE  + +     +       DPRFE  CG L  E  ++ Y F++  +  +EK++L++K+K+  +D +  +ELK   ++     ++A+ +  N  I++ +KK E+EA K+GK+PY+LK+ D+R  ++  K+EELK TG ++ ++ K+R++ A KD + +P RRP
Sbjct:   27 EEEEEIERELADVTFEELLRARSDGSEMVYRKSNAEKKSSRANKNRPMEMSSKKPVSRFRE-VIQVPKRVGR-------DPRFESLCGKLDVEGFKKRYDFIQKNELPAEKEALKKKMKEE-KDPEVINELKDRMVQIGRELKSAVTKHTNKEIIAEHKKKEREAAKKGKRPYYLKKSDIRKQKLIQKYEELKGTGKLESFLDKKRRKNAAKDHRYMPYRRP 239          
The following BLAST results are available for this feature:
BLAST of Gchil7424.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5X5_9FLOR1.670e-8762.07rRNA biogenesis protein RRP36 n=1 Tax=Gracilariops... [more]
UPI001BB2C4843.220e-2338.67ribosomal RNA processing protein 36 homolog n=1 Ta... [more]
A0A022QQH0_ERYGU9.810e-2339.47rRNA biogenesis protein RRP36 n=1 Tax=Erythranthe ... [more]
A0A2B4RGF2_STYPI1.590e-2232.42rRNA biogenesis protein RRP36 n=2 Tax=Pocilloporid... [more]
UPI001CB8CD465.350e-2238.22ribosomal RNA processing protein 36 homolog n=1 Ta... [more]
A0A830BE02_9LAMI2.580e-2138.25rRNA biogenesis protein RRP36 n=1 Tax=Phtheirosper... [more]
A0A5J4YUH1_PORPP3.570e-2136.26rRNA biogenesis protein RRP36 n=1 Tax=Porphyridium... [more]
S8C150_9LAMI5.030e-2139.01rRNA biogenesis protein RRP36 n=1 Tax=Genlisea aur... [more]
UPI0011DF4F262.290e-2035.92ribosomal RNA processing protein 36 homolog isofor... [more]
UPI000C1D35452.680e-2032.43ribosomal RNA processing protein 36 homolog isofor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009292rRNA biogenesis protein RRP36PFAMPF06102RRP36coord: 60..229
e-value: 5.4E-36
score: 124.1
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 29..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1133792..1134526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7424.t1Gchil7424.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1133792..1134526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7424.t1 ID=Gchil7424.t1|Name=Gchil7424.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=245bp
MAMSSTELVPRGSSREEPTLGEVLQSKEKSARGKAEYASHSILRKLARGI
EFAPRSIKERGKKSRPREISSRAPVPVGRERCLGIDNGAHQSRSLRKFDP
RFEEHCGDLLEEHVERNYAFVRSIQNSEKKSLEEKVKKNPEDYDASHELK
SMEQSEIRRNALLRRRNILSAYKKNEKEAVKRGKQPYFLKEKDVRNLEMR
AKFEELKKTGGVKRYIQKRRKRLAGKDKKLLPNRRPLSNPGSGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36