Gchil3810.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3810.t1
Unique NameGchil3810.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Homology
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A2V3J354_9FLOR (30S ribosomal protein S21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J354_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 1.310e-39
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0
Query:   22 MAFGTPLPARIAPLPHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNS 105
            MAFG PLPARI P P  SN RMEVTV++GDSEPIEGALRRFKKEV+KSGHLFELRRRRYFETNTE+RIRKAAAAKRKA+L+RN+
Sbjct:    1 MAFGAPLPARIPPPPAASNVRMEVTVIIGDSEPIEGALRRFKKEVTKSGHLFELRRRRYFETNTERRIRKAAAAKRKAKLSRNT 84          
BLAST of Gchil3810.t1 vs. uniprot
Match: L1IRJ6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRJ6_GUITC)

HSP 1 Score: 73.6 bits (179), Expect = 1.190e-14
Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    4 SPAATTLCPARPAPFFSSMAFGTPLPARIAPLPHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNS 105
            +PA+++L    PA  FS+ A  T  P  +AP      T +++ V V + EPIE A+RRFK  V+KSGHL EL+RRR FETN EK+IRK   ++R   L R S
Sbjct:   12 TPASSSLV--TPAARFSAPALSTRRPVTVAP------TMVDIKVAVNEGEPIESAMRRFKIAVAKSGHLVELKRRRTFETNNEKKIRKDKESRRTRSLMRRS 105          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A835YQE4_9STRA (Ribosomal protein S21-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.350e-14
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   25 GTPLPARIAPLPHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNSAR 107
            G  L +R       S+  MEV +VVGD E +E AL RFK+ V++SGH+ ELR RRYFET  E++ RKA  A+++AR+ R+ AR
Sbjct:   26 GAQLTSRAPAAKSASHLSMEVKIVVGDGESVESALNRFKRAVARSGHMQELRYRRYFETTQERKKRKATLARKRARIARSKAR 108          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A7S2ZBU8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBU8_9RHOD)

HSP 1 Score: 72.8 bits (177), Expect = 2.630e-14
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0
Query:   33 APLPHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNS 105
            AP P  +   MEV V + D E IE ALRRFK+EV +SGHL E+RRR+ FET+TE+RIRK A +K++ R+ RN+
Sbjct:   39 APAPR-ARVNMEVAVNLEDGENIEQALRRFKREVLRSGHLMEIRRRKNFETSTERRIRKEAMSKKRQRIARNA 110          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A7S1Z7E6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7E6_TRICV)

HSP 1 Score: 72.0 bits (175), Expect = 5.000e-14
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0
Query:   36 PHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTR 103
            P  ++  ++V VVVG+ EPIE ALRRFK+EV+KSGHL ELR +RYFE + EK+ RK   A+ + RL R
Sbjct:   34 PSTTSLNVDVKVVVGEGEPIESALRRFKREVNKSGHLMELRHKRYFENSQEKKKRKLTQARMRKRLER 101          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A7R9W5B5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5B5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.290e-14
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   19 FSSMAFG-TPLPA-RIAPLPHFSNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTR 103
            F++MA   +P PA + A L   +   +++ VVVG+ EPIE ALRRFK+EV+KSGHL ELR RR+FE + EK+ RK   A+ + RL R
Sbjct:   12 FAAMAVAFSPAPAFKKAALVSPTALNVDIKVVVGEGEPIESALRRFKREVNKSGHLMELRHRRFFENSQEKKKRKIVQARNRRRLER 98          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A7S2UNK4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNK4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.750e-13
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   33 APLPHFSNT--------RMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTR 103
            AP P F N          ++V + VGD EPIE ALRRFK+EV+KSGHL ELR +RYFE   EK+ RK   A+ + R+ R
Sbjct:   36 APTPTFRNAVTVSPSALNVDVKISVGDGEPIESALRRFKREVNKSGHLMELRHKRYFENTQEKKKRKIVQARNRKRIER 114          
BLAST of Gchil3810.t1 vs. uniprot
Match: L1IRR2_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRR2_GUITC)

HSP 1 Score: 68.9 bits (167), Expect = 7.620e-13
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   41 TRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRK 98
            T +++ V V + EPIEGA+RRFK  VSKSGHL EL+RRR FE+N EK+IRK   AKRK
Sbjct:   42 TMVDIKVQVKEGEPIEGAMRRFKIAVSKSGHLMELKRRRRFESNNEKKIRKDKEAKRK 99          
BLAST of Gchil3810.t1 vs. uniprot
Match: W7TSY1_9STRA (Ribosomal protein s21 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSY1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.050e-12
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   44 EVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNSARQAQRM 112
            +V V VGD E I+ A++RFK+EV+KSGHL +LR  RY ETN EK  RKA  A+RKAR+ R S R+ Q++
Sbjct:   54 DVMVSVGDGENIDNAVKRFKREVNKSGHLLDLRFHRYHETNQEKAKRKAVQARRKARMLRLSLRKGQKL 122          
BLAST of Gchil3810.t1 vs. uniprot
Match: A0A835ZBS8_9STRA (Chloroplast 30S ribosomal protein 21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.160e-12
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 0
Query:   39 SNTRMEVTVVVGDSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKARLTRNSAR 107
            S   MEV +VVGD E +E AL RFK+ V +SGH+ EL+ RRYFET  E++ RKA  A+++AR+ R+  R
Sbjct:   38 STLSMEVKIVVGDGESVESALTRFKRAVGRSGHMQELKYRRYFETTQERKKRKATLARKRARIARSKMR 106          
The following BLAST results are available for this feature:
BLAST of Gchil3810.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J354_9FLOR1.310e-3984.5230S ribosomal protein S21 n=1 Tax=Gracilariopsis c... [more]
L1IRJ6_GUITC1.190e-1447.06Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A835YQE4_9STRA1.350e-1449.40Ribosomal protein S21-domain-containing protein n=... [more]
A0A7S2ZBU8_9RHOD2.630e-1456.16Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1Z7E6_TRICV5.000e-1455.88Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9W5B5_9STRA9.290e-1450.57Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2UNK4_9STRA2.750e-1350.63Hypothetical protein n=1 Tax=Attheya septentrional... [more]
L1IRR2_GUITC7.620e-1363.79Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
W7TSY1_9STRA1.050e-1256.52Ribosomal protein s21 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A835ZBS8_9STRA1.160e-1252.17Chloroplast 30S ribosomal protein 21 n=1 Tax=Tribo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001911Ribosomal protein S21PRINTSPR00976RIBOSOMALS21coord: 68..78
score: 45.45
coord: 80..90
score: 36.36
coord: 48..56
score: 40.74
coord: 56..65
score: 62.5
IPR001911Ribosomal protein S21PFAMPF01165Ribosomal_S21coord: 46..100
e-value: 1.0E-18
score: 66.8
IPR001911Ribosomal protein S21TIGRFAMTIGR00030TIGR00030coord: 45..100
e-value: 1.6E-16
score: 57.9
IPR001911Ribosomal protein S21PANTHERPTHR21109MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21coord: 42..107
IPR001911Ribosomal protein S21HAMAPMF_00358Ribosomal_S21coord: 44..100
score: 18.384686
IPR038380Ribosomal protein S21 superfamilyGENE3D1.20.5.1150Ribosomal protein S8coord: 59..97
e-value: 9.2E-12
score: 46.2
IPR018278Ribosomal protein S21, conserved sitePROSITEPS01181RIBOSOMAL_S21coord: 56..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000010_piloncontigtig00000010_pilon:518139..518574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3810.t1Gchil3810.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000010_pilon 518139..518574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3810.t1 ID=Gchil3810.t1|Name=Gchil3810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MTPSPAATTLCPARPAPFFSSMAFGTPLPARIAPLPHFSNTRMEVTVVVG
DSEPIEGALRRFKKEVSKSGHLFELRRRRYFETNTEKRIRKAAAAKRKAR
LTRNSARQAQRMAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001911Ribosomal_S21
IPR038380S21_sf
IPR018278Ribosomal_S21_CS