Gchil4342.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4342.t1
Unique NameGchil4342.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length305
Homology
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR)

HSP 1 Score: 340 bits (872), Expect = 5.060e-114
Identity = 159/274 (58.03%), Postives = 201/274 (73.36%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKE 274
            M+  +DSLG A  F+TLD NSGYWQ+P+ E DR+KT F CH+G ++F RMPFG  NAPATFQR +DILL+ ++W++CLVY DDII+FSN +++H  HV+ V+K+L+DAG++LKL+KC  F +SV YLGH+IRPG L++ E    ++K+A+   TQTELRSFLG+CNVY RFVPNFA    PLN LL KG+P +LE F   ++ AF  L  AV SPPIL LP   LP  VDTDA   QVGCALFQ+   G RHP  +WSRSL   E NYSV E+ 
Sbjct:   27 MEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTTQTELRSFLGMCNVYRRFVPNFARTAAPLNVLLAKGKPFQLEKFSVEQSKAFGLLKTAVISPPILKLPRSNLPISVDTDACERQVGCALFQTYPDGTRHPAGFWSRSLIPAENNYSVGERN 300          
BLAST of Gchil4342.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407)

HSP 1 Score: 360 bits (923), Expect = 3.140e-113
Identity = 174/303 (57.43%), Postives = 214/303 (70.63%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            MD+ IDSLG A +F+TLD NSGYWQ+P+R EDR+KT F  H+GL+ FLRMPFG  NAPATFQR +DI L+   W+TCLVYLDDIIVFS    +H+ H+  V+  L  AG+TL LKKC  F ++V YLGH+IRPGQLS+ +    +LK  KHP TQTELRSFLGLCNVY RFV  FA I  PLN LL KG+  +L P    + SAF  L +A+ +PPILALP       +DTDAS +Q+GC L Q+   G + PI YWSR+L   E+NYS +EKECLA+VWA+  LRPYL   +F + TDH  L
Sbjct:   51 MDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIGYWSRALTSAEKNYSTTEKECLAIVWAILHLRPYLEQQKFIIRTDHHSL 353          
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR)

HSP 1 Score: 295 bits (755), Expect = 2.460e-90
Identity = 141/254 (55.51%), Postives = 185/254 (72.83%), Query Frame = 0
Query:   50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            MP G TNAPATFQRA+DILL+PF+W+ CLVY   II+FS + ++H+ HV  ++ +L  A + LKL+KCE F + +KYLG ++RPG L +D  R  +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I  PLN+LL KGQ ++LE   +     F  L +A+  PP+LALP   LPY VDTDAS  Q+G ALFQ+    +R PI ++SR+L   ERNYSVSEKECLAV+WA+ TL PYL G  F VHTD+A L
Sbjct:    1 MPLGLTNAPATFQRAMDILLSPFRWKCCLVY---IIIFSKSWEEHVVHVDEILSVLEKACVKLKLRKCEFFVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIRFFSRTLAAAERNYSVSEKECLAVIWAVQTLGPYLYGEHFVVHTDYASL 251          
BLAST of Gchil4342.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D)

HSP 1 Score: 286 bits (732), Expect = 1.420e-85
Identity = 142/303 (46.86%), Postives = 189/303 (62.38%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            +D  +DSLG A  FSTLDANSGYWQ+ +   DRDKT F  H+GL+RF R+PFG  +APATFQRAID++L+  ++R  L YLDDIIVFS   + H+  +  V+ ++RDAG+TLKL KC      V YLG+I+    L +D  ++ SL+ A  PKT+T +R FLG+C VY RF+P +A I   L R L    P   E   +    A   L  ++ + PILALP P   Y ++ DASA+Q+G  L Q        P+ +WSR     E NYS +E+E LA+VW +   RPYL  TRF+VH+DH  L
Sbjct:  679 VDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVRFRCALTYLDDIIVFSFTFEQHMRDLDLVLSLVRDAGVTLKLVKCRFAAPEVPYLGYIVGREGLRVDNSKISSLQAAVPPKTKTGIRRFLGMCGVYRRFIPGYAKISVALTRYLKDDIPDGFE-LDEAAVRAHAKLKESITTAPILALPRPQGLYVLEADASASQLGVQLLQQQPDQSLRPVGFWSRQCTAAECNYSPTEREALAIVWGVRICRPYLDRTRFRVHSDHQAL 980          
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 279 bits (714), Expect = 5.100e-85
Identity = 144/278 (51.80%), Postives = 170/278 (61.15%), Query Frame = 0
Query:   26 VPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            V I EEDRDKT F  H GL+RFLRMPFG  NAPATFQRA+DI+L+  KW T LVYLDD+I                               C  F  SV YLGH+IRPG+L ++   V +++ A+ P  QTELRSFLG+CNVY RFV  FA I  PLN+   K Q  E E   D E +AF  L   + SPPILALP  G  Y +DTDA  +QVGCAL Q    G   PI YWSR+L   ERNY+ +EKECLAVVW++ TLRPYL G+ F + TDH  L
Sbjct:   97 VEIAEEDRDKTTFASHSGLYRFLRMPFGLKNAPATFQRAVDIILSRVKWETALVYLDDVI-------------------------------CAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIAAPLNKKTGKNQAYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGARPIGYWSRALTDAERNYTTTEKECLAVVWSILTLRPYLYGSAFNLRTDHEAL 343          
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR)

HSP 1 Score: 268 bits (686), Expect = 3.600e-83
Identity = 133/254 (52.36%), Postives = 167/254 (65.75%), Query Frame = 0
Query:   50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            MPFG TNAPATFQRA+DILL+PF+W+ CL                                      CE F + +KYLGH++RPG L +D  R  +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I  PLN+LL KGQPV+LE F +    AF  L +A+ +PP+LALP   LPY VDTDAS  Q+G ALFQ+    +R PI ++S++L   ERNYSVSEKECLAV+WA+ TLRPYL G  F VHTDHA L
Sbjct:    1 MPFGLTNAPATFQRAMDILLSPFRWKCCL--------------------------------------CEFFVEKIKYLGHVVRPGTLEVDVARTAALEQVQYPRTQTQLRSFLGLCNVYRRFVPHYAKIARPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIGFFSKTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFVVHTDHASL 216          
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 270 bits (689), Expect = 2.010e-80
Identity = 136/254 (53.54%), Postives = 170/254 (66.93%), Query Frame = 0
Query:   50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            MPFG TNAPATFQRA+DILL+PF+W+ CL                                 LKL+KCE F + +KYLGH++RPG L +D  R  +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I  PLN+LL KGQPV+LE F +    AF  L +A+ +P +LALP   LPY VDTDAS  Q+G ALFQ+    +R PI ++SR+L   ERNYSVSEKE LAV+WA+ TLRPYL G  F VHTDHA L
Sbjct:    1 MPFGLTNAPATFQRAMDILLSPFRWKCCL---------------------------------LKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIVHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPLVLALPKKDLPYPVDTDASDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKEFLAVIWAVQTLRPYLYGEHFIVHTDHASL 221          
BLAST of Gchil4342.t1 vs. uniprot
Match: A0A4W5KW47_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5KW47_9TELE)

HSP 1 Score: 257 bits (656), Expect = 3.730e-80
Identity = 137/303 (45.21%), Postives = 186/303 (61.39%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            + + ++SL  A VF+TLD NSGYWQV + +E +DKTAFVC +GLF F  MPFG  NAPATFQR ++I L   K + C VYLDDII++S   + H + ++ V+  LR+AG+TL +KK      S+K+LGHI+    + +D  + K+++E   P T   L+ FLG+   Y RFV NF+ +  PLN L  KG  V+     + + S F  L   + +PPIL  PN   P+ V TDAS   +G  L Q +  G    + + SR+LN  ERNYS +E+ECLAVVWAL   R YL G  F V TDH+ L
Sbjct:   75 IQEILESLSGAVVFTTLDLNSGYWQVEMDQESKDKTAFVCAEGLFSFKVMPFGLKNAPATFQRLMEIALGELKGKICFVYLDDIIIYSQTREQHYQDLQEVLDKLREAGLTLNMKKSNFCQTSLKFLGHIVSFDGIHVDPEKTKAVQEFPVPTTLKALQRFLGMAGWYHRFVSNFSQVAEPLNALKRKG--VKFRWTAECQTS-FETLKRHLVTPPILGHPNFDCPFVVYTDASDVGLGAVLVQQTGLGTEEVLAFASRTLNGAERNYSTTEQECLAVVWALEKWRYYLEGRHFTVVTDHSSL 374          
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 268 bits (684), Expect = 1.110e-79
Identity = 144/300 (48.00%), Postives = 170/300 (56.67%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDH 300
            M + IDSLG AT                   DRDKT F  H GL+RFLRMPF   NAPATFQRA+DI+L+  KW T LVYLDD                                 C  F  SV YLGH+IRPGQL ++   V +++ A+ P  QTELRSFLG+CNVY  FV  FA +  PLN+   K QP + E   D E +AF  L   + SPPILALP  G  Y +DTDA  +QVGCAL Q    G   PI YWSR+L   ERNY+  EKECLAVVW++ TLRPYL G+ F + TDH
Sbjct:   24 MGECIDSLGDAT-------------------DRDKTTFASHSGLYRFLRMPFALKNAPATFQRAVDIILSRVKWETALVYLDD---------------------------------CGFFDTSVTYLGHVIRPGQLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRWFVQGFAKVAAPLNKNTGKNQPYDFEVLTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTNAERNYTTIEKECLAVVWSILTLRPYLYGSAFNLRTDH 271          
BLAST of Gchil4342.t1 vs. uniprot
Match: A0A1Z5KVF1_ORNMO (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KVF1_ORNMO)

HSP 1 Score: 258 bits (660), Expect = 2.300e-79
Identity = 133/303 (43.89%), Postives = 188/303 (62.05%), Query Frame = 0
Query:    1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
            +D  +D L SA  FS++D  +GYWQV + E DR+KTAFV   GL+ F  MPFG   APATFQR +D +LA  KW+TCLVYLDD++VF+   ++H+E ++ V++ +R AG+TLK +KC    + +K+LGH++    +  D  +  ++     P    E+RSFLGLC  Y RF+  F++I + LN L   G P +   + + +  AF  L   +++ P+LA  +P    E+ TDAS   +G  L Q     ER  I Y SR+L+  E+NYS +EKECLA+VWA+  LRPYL G  FKV TDH  L
Sbjct:   51 IDDTLDRLQSAKFFSSMDLRTGYWQVEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPATFQRVMDTVLAGLKWQTCLVYLDDVVVFARTFEEHIERLKQVLEAIRTAGLTLKPEKCRFGYEELKFLGHLVNSDGIRPDPEKTAAIDSYPVPSNVKEVRSFLGLCAYYRRFILCFSEIASSLNALTKDGTPFQ---WHEEQQQAFDELRARLQTAPVLAHFDPNAETELHTDASNEGLGAVLIQLQNGLER-VIAYASRTLSKAEKNYSTTEKECLALVWAITKLRPYLYGRPFKVVTDHHAL 349          
The following BLAST results are available for this feature:
BLAST of Gchil4342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QRD9_CHOCR5.060e-11458.03Retrotransposon protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1E14073.140e-11357.43uncharacterized protein LOC123543642 n=1 Tax=Merce... [more]
R7QFB9_CHOCR2.460e-9055.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D2C1D1.420e-8546.86uncharacterized protein LOC123544039 n=1 Tax=Merce... [more]
R7QKK5_CHOCR5.100e-8551.80Integrase catalytic domain-containing protein n=1 ... [more]
R7QL13_CHOCR3.600e-8352.36Integrase catalytic domain-containing protein n=2 ... [more]
R7QG36_CHOCR2.010e-8053.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A4W5KW47_9TELE3.730e-8045.21Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 Rep... [more]
R7QLF2_CHOCR1.110e-7948.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A1Z5KVF1_ORNMO2.300e-7943.89RNA-directed DNA polymerase (Fragment) n=1 Tax=Orn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 3..131
e-value: 3.9E-28
score: 98.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..131
score: 15.291804
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 24..56
e-value: 1.9E-50
score: 173.1
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 4..303
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 4..303
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..131
e-value: 4.95336E-65
score: 200.514
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 228..303
e-value: 1.7266E-32
score: 114.512
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 2..131
e-value: 1.9E-50
score: 173.1
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 141..237
e-value: 2.1E-18
score: 68.1
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 198..296
e-value: 1.8E-29
score: 101.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:2149836..2150750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4342.t1Gchil4342.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 2149836..2150750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4342.t1 ID=Gchil4342.t1|Name=Gchil4342.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=305bp
MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRM
PFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRN
VMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAK
HPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDT
EASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGE
RHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDH
ACLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043128Rev_trsase/Diguanyl_cyclase
IPR041577RT_RNaseH_2
IPR043502DNA/RNA_pol_sf