Gchil4342.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QRD9_CHOCR (Retrotransposon protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRD9_CHOCR) HSP 1 Score: 340 bits (872), Expect = 5.060e-114 Identity = 159/274 (58.03%), Postives = 201/274 (73.36%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKE 274
M+ +DSLG A F+TLD NSGYWQ+P+ E DR+KT F CH+G ++F RMPFG NAPATFQR +DILL+ ++W++CLVY DDII+FSN +++H HV+ V+K+L+DAG++LKL+KC F +SV YLGH+IRPG L++ E ++K+A+ TQTELRSFLG+CNVY RFVPNFA PLN LL KG+P +LE F ++ AF L AV SPPIL LP LP VDTDA QVGCALFQ+ G RHP +WSRSL E NYSV E+
Sbjct: 27 MEDCLDSLGDAKCFTTLDCNSGYWQIPVAEADREKTTFTCHEGCYQFRRMPFGLCNAPATFQRTLDILLSGYRWKSCLVYFDDIIIFSNFIEEHSTHVQQVLKVLQDAGLSLKLEKCNFFAESVDYLGHVIRPGLLAVAEKNTDAIKKAQERTTQTELRSFLGMCNVYRRFVPNFARTAAPLNVLLAKGKPFQLEKFSVEQSKAFGLLKTAVISPPILKLPRSNLPISVDTDACERQVGCALFQTYPDGTRHPAGFWSRSLIPAENNYSVGERN 300
BLAST of Gchil4342.t1 vs. uniprot
Match: UPI001E1E1407 (uncharacterized protein LOC123543642 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1407) HSP 1 Score: 360 bits (923), Expect = 3.140e-113 Identity = 174/303 (57.43%), Postives = 214/303 (70.63%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
MD+ IDSLG A +F+TLD NSGYWQ+P+R EDR+KT F H+GL+ FLRMPFG NAPATFQR +DI L+ W+TCLVYLDDIIVFS +H+ H+ V+ L AG+TL LKKC F ++V YLGH+IRPGQLS+ + +LK KHP TQTELRSFLGLCNVY RFV FA I PLN LL KG+ +L P + SAF L +A+ +PPILALP +DTDAS +Q+GC L Q+ G + PI YWSR+L E+NYS +EKECLA+VWA+ LRPYL +F + TDH L
Sbjct: 51 MDECIDSLGDAKIFTTLDCNSGYWQIPVRPEDREKTTFTSHEGLYWFLRMPFGLRNAPATFQRFVDITLSGLTWKTCLVYLDDIIVFSKTPTEHMAHLDAVLHRLYRAGLTLNLKKCHFFKETVDYLGHVIRPGQLSVAKKNTAALKVTKHPTTQTELRSFLGLCNVYRRFVKGFAKIAAPLNLLLRKGETPQLGPLSAEQVSAFETLRDALLNPPILALPRTEGALTLDTDASDHQLGCCLLQTQPDGSQRPIGYWSRALTSAEKNYSTTEKECLAIVWAILHLRPYLEQQKFIIRTDHHSL 353
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QFB9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFB9_CHOCR) HSP 1 Score: 295 bits (755), Expect = 2.460e-90 Identity = 141/254 (55.51%), Postives = 185/254 (72.83%), Query Frame = 0
Query: 50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
MP G TNAPATFQRA+DILL+PF+W+ CLVY II+FS + ++H+ HV ++ +L A + LKL+KCE F + +KYLG ++RPG L +D R +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I PLN+LL KGQ ++LE + F L +A+ PP+LALP LPY VDTDAS Q+G ALFQ+ +R PI ++SR+L ERNYSVSEKECLAV+WA+ TL PYL G F VHTD+A L
Sbjct: 1 MPLGLTNAPATFQRAMDILLSPFRWKCCLVY---IIIFSKSWEEHVVHVDEILSVLEKACVKLKLRKCEFFVEKIKYLGRVVRPGTLEVDAARTAALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIEHPLNQLLKKGQLLQLEGLDEPCEKDFHKLKDAILEPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIRFFSRTLAAAERNYSVSEKECLAVIWAVQTLGPYLYGEHFVVHTDYASL 251
BLAST of Gchil4342.t1 vs. uniprot
Match: UPI001E1D2C1D (uncharacterized protein LOC123544039 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2C1D) HSP 1 Score: 286 bits (732), Expect = 1.420e-85 Identity = 142/303 (46.86%), Postives = 189/303 (62.38%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
+D +DSLG A FSTLDANSGYWQ+ + DRDKT F H+GL+RF R+PFG +APATFQRAID++L+ ++R L YLDDIIVFS + H+ + V+ ++RDAG+TLKL KC V YLG+I+ L +D ++ SL+ A PKT+T +R FLG+C VY RF+P +A I L R L P E + A L ++ + PILALP P Y ++ DASA+Q+G L Q P+ +WSR E NYS +E+E LA+VW + RPYL TRF+VH+DH L
Sbjct: 679 VDDSLDSLGGAQYFSTLDANSGYWQISVNPADRDKTTFTTHRGLYRFKRLPFGLVSAPATFQRAIDVILSTVRFRCALTYLDDIIVFSFTFEQHMRDLDLVLSLVRDAGVTLKLVKCRFAAPEVPYLGYIVGREGLRVDNSKISSLQAAVPPKTKTGIRRFLGMCGVYRRFIPGYAKISVALTRYLKDDIPDGFE-LDEAAVRAHAKLKESITTAPILALPRPQGLYVLEADASASQLGVQLLQQQPDQSLRPVGFWSRQCTAAECNYSPTEREALAIVWGVRICRPYLDRTRFRVHSDHQAL 980
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR) HSP 1 Score: 279 bits (714), Expect = 5.100e-85 Identity = 144/278 (51.80%), Postives = 170/278 (61.15%), Query Frame = 0
Query: 26 VPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
V I EEDRDKT F H GL+RFLRMPFG NAPATFQRA+DI+L+ KW T LVYLDD+I C F SV YLGH+IRPG+L ++ V +++ A+ P QTELRSFLG+CNVY RFV FA I PLN+ K Q E E D E +AF L + SPPILALP G Y +DTDA +QVGCAL Q G PI YWSR+L ERNY+ +EKECLAVVW++ TLRPYL G+ F + TDH L
Sbjct: 97 VEIAEEDRDKTTFASHSGLYRFLRMPFGLKNAPATFQRAVDIILSRVKWETALVYLDDVI-------------------------------CAFFDTSVTYLGHVIRPGRLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRRFVQGFAKIAAPLNKKTGKNQAYEFEILTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGARPIGYWSRALTDAERNYTTTEKECLAVVWSILTLRPYLYGSAFNLRTDHEAL 343
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR) HSP 1 Score: 268 bits (686), Expect = 3.600e-83 Identity = 133/254 (52.36%), Postives = 167/254 (65.75%), Query Frame = 0
Query: 50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
MPFG TNAPATFQRA+DILL+PF+W+ CL CE F + +KYLGH++RPG L +D R +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I PLN+LL KGQPV+LE F + AF L +A+ +PP+LALP LPY VDTDAS Q+G ALFQ+ +R PI ++S++L ERNYSVSEKECLAV+WA+ TLRPYL G F VHTDHA L
Sbjct: 1 MPFGLTNAPATFQRAMDILLSPFRWKCCL--------------------------------------CEFFVEKIKYLGHVVRPGTLEVDVARTAALEQVQYPRTQTQLRSFLGLCNVYRRFVPHYAKIARPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPPVLALPKKDLPYSVDTDASDYQIGAALFQTHPDAQRKPIGFFSKTLAAAERNYSVSEKECLAVIWAVQTLRPYLYGEHFVVHTDHASL 216
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR) HSP 1 Score: 270 bits (689), Expect = 2.010e-80 Identity = 136/254 (53.54%), Postives = 170/254 (66.93%), Query Frame = 0
Query: 50 MPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
MPFG TNAPATFQRA+DILL+PF+W+ CL LKL+KCE F + +KYLGH++RPG L +D R +L++ ++P+TQT+LRSFLGLCNVY RFVP++A I PLN+LL KGQPV+LE F + AF L +A+ +P +LALP LPY VDTDAS Q+G ALFQ+ +R PI ++SR+L ERNYSVSEKE LAV+WA+ TLRPYL G F VHTDHA L
Sbjct: 1 MPFGLTNAPATFQRAMDILLSPFRWKCCL---------------------------------LKLRKCEFFVEKIKYLGHVVRPGTLEVDAARTVALEQVRYPQTQTQLRSFLGLCNVYRRFVPHYAKIVHPLNQLLKKGQPVQLEGFDEPCKKAFHKLKDAILAPLVLALPKKDLPYPVDTDASDYQIGAALFQTHPDAQRKPIGFFSRTLAAAERNYSVSEKEFLAVIWAVQTLRPYLYGEHFIVHTDHASL 221
BLAST of Gchil4342.t1 vs. uniprot
Match: A0A4W5KW47_9TELE (Ribonuclease H n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5KW47_9TELE) HSP 1 Score: 257 bits (656), Expect = 3.730e-80 Identity = 137/303 (45.21%), Postives = 186/303 (61.39%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
+ + ++SL A VF+TLD NSGYWQV + +E +DKTAFVC +GLF F MPFG NAPATFQR ++I L K + C VYLDDII++S + H + ++ V+ LR+AG+TL +KK S+K+LGHI+ + +D + K+++E P T L+ FLG+ Y RFV NF+ + PLN L KG V+ + + S F L + +PPIL PN P+ V TDAS +G L Q + G + + SR+LN ERNYS +E+ECLAVVWAL R YL G F V TDH+ L
Sbjct: 75 IQEILESLSGAVVFTTLDLNSGYWQVEMDQESKDKTAFVCAEGLFSFKVMPFGLKNAPATFQRLMEIALGELKGKICFVYLDDIIIYSQTREQHYQDLQEVLDKLREAGLTLNMKKSNFCQTSLKFLGHIVSFDGIHVDPEKTKAVQEFPVPTTLKALQRFLGMAGWYHRFVSNFSQVAEPLNALKRKG--VKFRWTAECQTS-FETLKRHLVTPPILGHPNFDCPFVVYTDASDVGLGAVLVQQTGLGTEEVLAFASRTLNGAERNYSTTEQECLAVVWALEKWRYYLEGRHFTVVTDHSSL 374
BLAST of Gchil4342.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR) HSP 1 Score: 268 bits (684), Expect = 1.110e-79 Identity = 144/300 (48.00%), Postives = 170/300 (56.67%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDH 300
M + IDSLG AT DRDKT F H GL+RFLRMPF NAPATFQRA+DI+L+ KW T LVYLDD C F SV YLGH+IRPGQL ++ V +++ A+ P QTELRSFLG+CNVY FV FA + PLN+ K QP + E D E +AF L + SPPILALP G Y +DTDA +QVGCAL Q G PI YWSR+L ERNY+ EKECLAVVW++ TLRPYL G+ F + TDH
Sbjct: 24 MGECIDSLGDAT-------------------DRDKTTFASHSGLYRFLRMPFALKNAPATFQRAVDIILSRVKWETALVYLDD---------------------------------CGFFDTSVTYLGHVIRPGQLEVERRNVIAIERARAPTNQTELRSFLGMCNVYRWFVQGFAKVAAPLNKNTGKNQPYDFEVLTDAEYAAFEELKRRLVSPPILALPRYGRKYTLDTDACGHQVGCALLQEQPDGGTRPIGYWSRALTNAERNYTTIEKECLAVVWSILTLRPYLYGSAFNLRTDH 271
BLAST of Gchil4342.t1 vs. uniprot
Match: A0A1Z5KVF1_ORNMO (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KVF1_ORNMO) HSP 1 Score: 258 bits (660), Expect = 2.300e-79 Identity = 133/303 (43.89%), Postives = 188/303 (62.05%), Query Frame = 0
Query: 1 MDKYIDSLGSATVFSTLDANSGYWQVPIREEDRDKTAFVCHQGLFRFLRMPFGFTNAPATFQRAIDILLAPFKWRTCLVYLDDIIVFSNNLDDHLEHVRNVMKILRDAGITLKLKKCEVFTDSVKYLGHIIRPGQLSIDEVRVKSLKEAKHPKTQTELRSFLGLCNVYCRFVPNFADIPTPLNRLLTKGQPVELEPFGDTEASAFTALVNAVKSPPILALPNPGLPYEVDTDASANQVGCALFQSSEYGERHPIWYWSRSLNVHERNYSVSEKECLAVVWALATLRPYLMGTRFKVHTDHACL 303
+D +D L SA FS++D +GYWQV + E DR+KTAFV GL+ F MPFG APATFQR +D +LA KW+TCLVYLDD++VF+ ++H+E ++ V++ +R AG+TLK +KC + +K+LGH++ + D + ++ P E+RSFLGLC Y RF+ F++I + LN L G P + + + + AF L +++ P+LA +P E+ TDAS +G L Q ER I Y SR+L+ E+NYS +EKECLA+VWA+ LRPYL G FKV TDH L
Sbjct: 51 IDDTLDRLQSAKFFSSMDLRTGYWQVEVDERDREKTAFVTPDGLYEFKVMPFGLCTAPATFQRVMDTVLAGLKWQTCLVYLDDVVVFARTFEEHIERLKQVLEAIRTAGLTLKPEKCRFGYEELKFLGHLVNSDGIRPDPEKTAAIDSYPVPSNVKEVRSFLGLCAYYRRFILCFSEIASSLNALTKDGTPFQ---WHEEQQQAFDELRARLQTAPVLAHFDPNAETELHTDASNEGLGAVLIQLQNGLER-VIAYASRTLSKAEKNYSTTEKECLALVWAITKLRPYLYGRPFKVVTDHHAL 349 The following BLAST results are available for this feature:
BLAST of Gchil4342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil4342.t1 ID=Gchil4342.t1|Name=Gchil4342.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=305bpback to top |