Gchil9540.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9540.t1
Unique Name	Gchil9540.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	328

Homology

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BLAST of Gchil9540.t1 vs. uniprot
Match: A0A2V3J2Y2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y2_9FLOR)

HSP 1 Score: 362 bits (930), Expect = 3.210e-121
Identity = 197/329 (59.88%), Postives = 240/329 (72.95%), Query Frame = 0

Query:    1 MKPPTPVQAMDHEGGTIHSVLLVQDRRTGRSEASVERTL-RVIPQSMPKVQTRHAFYPSDSVQSHQSRSNVANFQGQMNTIQEWAAVRVRPSIYPQRTTRALTMRPAALGLVSVSALTSGSVFLRNATRKRKPRVSEPIREDQEICSVVSIHIPFCVSERENMMGKLQELENNVNLMTPDGMACAARKAAKILLGEGRLLEDSRKFAPKVDVYLAEDMKCAEKRFAGHVEIEAHRIDRIRKCNQR-VPPNSRKYGVATIVVATTEGVDLACYDEKATIICRLRGALDRISRLRAGQVAGLELQWFPEDCRERSLTRAQLCEAFPGLKVV 327
            ++PP PV+AM +E  T   + +        ++ + E TL RV+P+     Q RH+     S  +  S S+  N+QGQ+NTI +WAAV VR +IYP R  R  ++RPA +GLVSVSA+TSGSV  R+ TRKR   V +   EDQ++CSVVSIHIPFCV ER  MM KL+EL     ++TP+GMA A R AA +LL E RLLEDSRKFAPKVDV+LAE+M CAEKRFAGHVEIEAHRIDR++ C Q+    +S +YGV T+VVATT GVDLACY+E ATIICRLRGALDRISRL++GQVAGLELQW PE   +RSL RAQLCE FPGLKVV
Sbjct:   63 VRPPMPVRAMQYETDTTAPLYISPGLHIEGTDTTHEGTLLRVLPEPQ---QERHSLSAPQSP-NLSSPSSATNYQGQVNTIPDWAAVGVRRTIYPHRNPRLSSIRPATIGLVSVSAVTSGSVLFRSVTRKRIRNVHKSTLEDQDVCSVVSIHIPFCVPERATMMKKLEELAAIAIILTPEGMAEATRSAANLLLDEARLLEDSRKFAPKVDVFLAENMACAEKRFAGHVEIEAHRIDRVKNCAQKNSTKSSGEYGVVTLVVATTAGVDLACYNEDATIICRLRGALDRISRLQSGQVAGLELQWVPESEEKRSLNRAQLCEVFPGLKVV 387

The following BLAST results are available for this feature:

BLAST of Gchil9540.t1 vs. uniprot

BLAST of Gchil9540.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2Y2_9FLOR	3.210e-121	59.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010903	Protein of unknown function DUF1517	PFAM	PF07466	DUF1517	coord: 146..325 e-value: 6.4E-9 score: 36.2
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..123
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 124..327
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:4771306..4772289 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9540.t1	Gchil9540.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 4771306..4772289 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9540.t1 ID=Gchil9540.t1|Name=Gchil9540.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=328bp
MKPPTPVQAMDHEGGTIHSVLLVQDRRTGRSEASVERTLRVIPQSMPKVQ
TRHAFYPSDSVQSHQSRSNVANFQGQMNTIQEWAAVRVRPSIYPQRTTRA
LTMRPAALGLVSVSALTSGSVFLRNATRKRKPRVSEPIREDQEICSVVSI
HIPFCVSERENMMGKLQELENNVNLMTPDGMACAARKAAKILLGEGRLLE
DSRKFAPKVDVYLAEDMKCAEKRFAGHVEIEAHRIDRIRKCNQRVPPNSR
KYGVATIVVATTEGVDLACYDEKATIICRLRGALDRISRLRAGQVAGLEL
QWFPEDCRERSLTRAQLCEAFPGLKVV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010903	DUF1517