Gchil7347.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7347.t1
Unique NameGchil7347.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length666
Homology
BLAST of Gchil7347.t1 vs. uniprot
Match: A0A2V3JAS0_9FLOR (Anaphase-promoting complex subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JAS0_9FLOR)

HSP 1 Score: 664 bits (1712), Expect = 4.660e-231
Identity = 377/609 (61.90%), Postives = 450/609 (73.89%), Query Frame = 0
Query:    1 MEPPAAARFLTAPNLLLALAASIPAIARTRHPFYPPMHALVTSPPPHSHLLHALSALVVHVNPAAAAPYLSQPVDDAPLSLLRLLVALLRRALSSPHALTQLLRIVEQHTDADLLGAYQPDSRITLFLRKVVVAFHSLSFESLVRLQHALHNHYPPTFDLSLHAKRLADSHPLPNPVFEQLSIRPRKPSPLSMLTHLESARRADFSTALAAAHRHFDTHAPQIPSHHAALALGILHARFSHKSHASAALRDALRCAQAAGDAQSQNVALQWLARMDNPEQASSLLRHAHDDLALVRHQLLTDSPPPPSAFSKLRNSVDALLLSASAWQLRAAVPTALCVARAALARAEKHEPLPESVARATVTVAELTALEGDHEPAMAMLEQCIKRLERPPDCSTAAPEIFMLQRSLTMLRFEASVRAMQLSDACALCDRIKAFALCSASNALAFSAEDVALDAIQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRAEAFLNSGEAGGAFSDALAAVSLASAMRLDSAHVKASLAAAEAMLRMDSPASQVLEILVPVLPRALDGLGCDVRSYACRLHAECLTKKCDENGSVPDEKVVRLVQQALDG 609
            MEPPAAARFLTA  LLLALAAS PA+A+   PF+P +H  VTSPP H H    L A+ VH N +  A Y+  P     + L  LL A+++ A++SPHA   L+ + E HTD DLLGAYQ DS + LFLRKV VAFHSLSFESL  LQ  L + Y P+ +L LHAK LA S PLP+PVF+ LS    KPS L+MLTHLESARR+DF  AL+A HRHFD HAP I  HHAALALGILHARFSHK+HAS ALRDALR AQAA D   Q VA+QWLA ++  EQA  LL HA D LAL RHQLLT SPP PS  +   NSVDA LL+A+AW  RA++PTALCVARAAL RA  H    +S  RA + VAE+TAL+ D    ++ML + I RL+     ST APE+FML+RSLTMLRFE +VRAMQL +AC L D+IKAFA C+ +NALAFSA+D  LD ++A VKC L+A D+R AAD+AL LA++AAV SRPERVVTGL +RAEAFL++ EAGGA SDALAA SLA AM LD+AHV++SL   E +LR++SPA QV   L P+LPRAL+GLG  VR+ AC+LHAECL K C E  SVPD++VV+LVQQAL+G
Sbjct:    1 MEPPAAARFLTAQKLLLALAASSPAVAKPLPPFFPVIHNFVTSPPSHEHFFRQLDAITVHPNVSLLATYVPNPTPPDSIPLSHLLNAIVKHAVTSPHAFFSLVYLFEHHTDPDLLGAYQLDSVVALFLRKVAVAFHSLSFESLTHLQSTLTSVYRPSPNLRLHAKLLAQSQPLPDPVFKLLSDTHYKPSALTMLTHLESARRSDFPLALSATHRHFDMHAPNISPHHAALALGILHARFSHKAHASTALRDALRAAQAADDTHCQKVAMQWLASVEPLEQAHLLLHHATDHLALTRHQLLTSSPPSPSELATAGNSVDARLLAAAAWLTRASLPTALCVARAALKRA--HRLQNDSYVRAVIAVAEMTALDADLPSGLSMLRRHILRLKHRHTNSTTAPELFMLERSLTMLRFEHTVRAMQLPEACILRDKIKAFAQCAKTNALAFSAQDAELDTMEADVKCFLLAEDSRAAADQALKLAKRAAVYSRPERVVTGLRLRAEAFLSAEEAGGALSDALAAASLAEAMHLDAAHVRSSLTVVETLLRLESPAKQVNATLTPILPRALEGLGSLVRARACQLHAECLMKACAETESVPDKQVVKLVQQALEG 607          
BLAST of Gchil7347.t1 vs. uniprot
Match: A0A2V3ILN9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILN9_9FLOR)

HSP 1 Score: 249 bits (636), Expect = 3.890e-75
Identity = 129/203 (63.55%), Postives = 164/203 (80.79%), Query Frame = 0
Query:  456 IQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRAEAFLNSGEAGGAFSDALAAVSLASAMRLDSAHVKASLAAAEAMLRMDSPASQVLEILVPVLPRALDGLGCDVRSYACRLHAECLTKKCDENGSVPDEKVVRLVQQALDGYRASGHANGIRDCLYMLARIHNWRNEIALRNRMSCLFRQHVHGIGRRKT 658
            ++A VKC L+A D+R AAD+AL LA++AAV SRPERVVTGL +RAEAFL++ EAGGA SD LAA SLA AM LD+AHV++SL   E +LR++SPA QV   L P+LPRAL+GLG  VR+ AC+LHAECL K C E  SVPD++VV+LVQQAL+GY ++G  NG+RD LY+LAR+H+WR EI LRNRMS LF QHV G+G++++
Sbjct:    1 MEADVKCFLLAEDSRAAADQALKLAKRAAVYSRPERVVTGLRLRAEAFLSAEEAGGALSDTLAAASLAEAMHLDAAHVRSSLTVVETLLRLESPAKQVNATLTPILPRALEGLGSLVRARACQLHAECLMKACAETESVPDKQVVKLVQQALEGYMSNGDINGVRDGLYILARVHHWRGEIPLRNRMSYLFNQHVDGLGKQQS 203          
BLAST of Gchil7347.t1 vs. uniprot
Match: A0A2V3IDY5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDY5_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 3.520e-15
Identity = 44/64 (68.75%), Postives = 54/64 (84.38%), Query Frame = 0
Query:  456 IQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRAEAFLNSGEAGGAFSDALAA 519
            ++A VKC L+A D+R AAD+AL LA++AAV SRPERVVT L +RAEAFL++ EAGGA SDALAA
Sbjct:    1 MEADVKCFLLAEDSRAAADQALKLAKRAAVYSRPERVVTSLRLRAEAFLSAEEAGGALSDALAA 64          
The following BLAST results are available for this feature:
BLAST of Gchil7347.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3JAS0_9FLOR4.660e-23161.90Anaphase-promoting complex subunit 5 n=1 Tax=Graci... [more]
A0A2V3ILN9_9FLOR3.890e-7563.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDY5_9FLOR3.520e-1568.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026000Anaphase-promoting complex subunit 5 domainPFAMPF12862ANAPC5coord: 193..276
e-value: 4.9E-13
score: 48.9
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830ANAPHASE-PROMOTING COMPLEX SUBUNIT 5coord: 92..650
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..665
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:569106..571103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1Gchil7347.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 569106..571103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=666bp
MEPPAAARFLTAPNLLLALAASIPAIARTRHPFYPPMHALVTSPPPHSHL
LHALSALVVHVNPAAAAPYLSQPVDDAPLSLLRLLVALLRRALSSPHALT
QLLRIVEQHTDADLLGAYQPDSRITLFLRKVVVAFHSLSFESLVRLQHAL
HNHYPPTFDLSLHAKRLADSHPLPNPVFEQLSIRPRKPSPLSMLTHLESA
RRADFSTALAAAHRHFDTHAPQIPSHHAALALGILHARFSHKSHASAALR
DALRCAQAAGDAQSQNVALQWLARMDNPEQASSLLRHAHDDLALVRHQLL
TDSPPPPSAFSKLRNSVDALLLSASAWQLRAAVPTALCVARAALARAEKH
EPLPESVARATVTVAELTALEGDHEPAMAMLEQCIKRLERPPDCSTAAPE
IFMLQRSLTMLRFEASVRAMQLSDACALCDRIKAFALCSASNALAFSAED
VALDAIQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRA
EAFLNSGEAGGAFSDALAAVSLASAMRLDSAHVKASLAAAEAMLRMDSPA
SQVLEILVPVLPRALDGLGCDVRSYACRLHAECLTKKCDENGSVPDEKVV
RLVQQALDGYRASGHANGIRDCLYMLARIHNWRNEIALRNRMSCLFRQHV
HGIGRRKTPSHAIET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026000Apc5_dom
IPR037679Apc5