Gchil7347.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7347.t1
Unique NameGchil7347.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length666
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:569106..571103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7347Gchil7347Gracilaria chilensis NLEC103_M9 malegenetig00000007_pilon 569106..571103 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1.stop1Gchil7347.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000007_pilon 569106..569108 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1.CDS1Gchil7347.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000007_pilon 569106..571103 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1.exon1Gchil7347.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000007_pilon 569106..571103 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1.start1Gchil7347.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000007_pilon 571101..571103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7347.t1Gchil7347.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000007_pilon 569106..571103 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=666bp
MEPPAAARFLTAPNLLLALAASIPAIARTRHPFYPPMHALVTSPPPHSHL
LHALSALVVHVNPAAAAPYLSQPVDDAPLSLLRLLVALLRRALSSPHALT
QLLRIVEQHTDADLLGAYQPDSRITLFLRKVVVAFHSLSFESLVRLQHAL
HNHYPPTFDLSLHAKRLADSHPLPNPVFEQLSIRPRKPSPLSMLTHLESA
RRADFSTALAAAHRHFDTHAPQIPSHHAALALGILHARFSHKSHASAALR
DALRCAQAAGDAQSQNVALQWLARMDNPEQASSLLRHAHDDLALVRHQLL
TDSPPPPSAFSKLRNSVDALLLSASAWQLRAAVPTALCVARAALARAEKH
EPLPESVARATVTVAELTALEGDHEPAMAMLEQCIKRLERPPDCSTAAPE
IFMLQRSLTMLRFEASVRAMQLSDACALCDRIKAFALCSASNALAFSAED
VALDAIQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRA
EAFLNSGEAGGAFSDALAAVSLASAMRLDSAHVKASLAAAEAMLRMDSPA
SQVLEILVPVLPRALDGLGCDVRSYACRLHAECLTKKCDENGSVPDEKVV
RLVQQALDGYRASGHANGIRDCLYMLARIHNWRNEIALRNRMSCLFRQHV
HGIGRRKTPSHAIET*
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spliced messenger RNA

>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1998bp|location=Sequence derived from alignment at tig00000007_pilon:569106..571103- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCCGCCTGCCGCCGCCCGCTTCCTCACCGCCCCCAACCTTCTCCT
CGCACTGGCCGCCTCCATCCCCGCCATCGCGCGCACTCGCCACCCCTTCT
ACCCGCCCATGCACGCGCTTGTCACGTCGCCACCGCCGCACTCGCACCTT
CTGCACGCTCTGTCCGCCCTCGTCGTCCACGTCAACCCCGCCGCTGCCGC
TCCATACCTCTCACAACCGGTCGATGACGCTCCATTGTCACTCCTCCGCC
TGCTCGTCGCCCTGCTTCGCCGCGCGCTCTCCTCACCGCATGCGCTCACA
CAGTTGCTTCGCATTGTCGAGCAGCACACTGACGCCGATTTGCTCGGCGC
CTATCAACCCGACTCTCGCATCACACTTTTTCTCAGGAAGGTCGTCGTCG
CCTTTCATTCCCTCTCCTTTGAGTCGCTCGTTCGTTTACAACATGCACTT
CACAACCATTACCCCCCCACCTTCGACCTCTCCCTGCACGCCAAACGTCT
GGCTGACTCTCACCCGCTTCCAAACCCTGTGTTCGAACAGCTCTCAATCC
GTCCGCGCAAACCATCCCCACTAAGCATGCTAACACACCTAGAGTCCGCC
CGTCGCGCCGACTTTTCCACCGCGCTTGCAGCCGCACATCGCCACTTTGA
CACCCACGCTCCACAGATACCGTCGCATCACGCCGCCCTCGCGCTGGGAA
TCCTGCACGCCCGCTTCTCACACAAGTCGCATGCGTCCGCCGCTCTACGA
GACGCTCTACGCTGCGCACAGGCTGCCGGAGACGCACAATCCCAAAACGT
TGCCTTGCAATGGCTTGCTCGCATGGACAACCCAGAGCAGGCCAGCTCTT
TGCTGCGTCATGCCCATGACGACCTAGCTCTTGTCCGTCATCAGTTGCTC
ACCGACTCTCCGCCCCCGCCGTCTGCGTTTTCAAAGCTGCGAAATTCAGT
CGACGCTCTCTTGCTTTCCGCCTCTGCGTGGCAGCTTCGCGCTGCCGTTC
CCACCGCCTTGTGTGTAGCGCGTGCCGCGCTCGCTCGCGCGGAGAAGCAC
GAACCGCTTCCAGAGTCCGTTGCACGCGCCACGGTTACAGTTGCTGAGCT
CACGGCATTGGAGGGCGATCATGAGCCGGCGATGGCAATGCTTGAGCAGT
GCATCAAGCGGCTTGAGCGCCCACCCGATTGTTCTACAGCAGCGCCGGAG
ATCTTCATGCTGCAGCGCTCGCTCACCATGCTCCGTTTTGAAGCAAGCGT
ACGAGCGATGCAACTGTCTGACGCGTGCGCCCTGTGCGACAGGATCAAGG
CATTTGCGTTGTGTTCTGCATCCAACGCTCTGGCATTTAGTGCGGAAGAT
GTTGCGTTGGATGCCATTCAAGCTCATGTCAAGTGTCTGCTGATGGCCTC
TGATACGCGTGGCGCCGCTGATGAAGCGCTCAATCTGGCTCGAAAGGCTG
CCGTGTCGAGCAGACCGGAGCGTGTTGTGACTGGCCTAACAATGCGCGCT
GAGGCTTTTCTCAACTCCGGGGAGGCTGGCGGCGCCTTTTCAGATGCCTT
GGCTGCTGTATCTTTGGCCAGTGCGATGCGACTGGACTCTGCGCATGTCA
AGGCTTCTCTGGCTGCTGCTGAGGCAATGTTGAGGATGGACTCACCTGCA
AGCCAAGTGCTTGAAATTCTAGTGCCGGTATTGCCAAGAGCACTTGACGG
ACTAGGATGTGATGTGCGGTCGTACGCGTGTCGACTTCATGCCGAATGCC
TGACAAAGAAGTGCGATGAAAACGGCTCGGTTCCAGATGAGAAGGTTGTT
AGACTTGTGCAACAAGCACTTGACGGCTATAGAGCTAGTGGTCATGCTAA
TGGTATACGTGATTGTCTCTACATGTTAGCTAGAATCCATAACTGGAGGA
ATGAAATTGCGCTGCGAAATCGCATGTCGTGTCTGTTTAGACAGCATGTG
CACGGAATTGGGAGACGAAAAACTCCATCGCATGCGATCGAAACCTGA
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protein sequence of Gchil7347.t1

>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=666bp
MEPPAAARFLTAPNLLLALAASIPAIARTRHPFYPPMHALVTSPPPHSHL
LHALSALVVHVNPAAAAPYLSQPVDDAPLSLLRLLVALLRRALSSPHALT
QLLRIVEQHTDADLLGAYQPDSRITLFLRKVVVAFHSLSFESLVRLQHAL
HNHYPPTFDLSLHAKRLADSHPLPNPVFEQLSIRPRKPSPLSMLTHLESA
RRADFSTALAAAHRHFDTHAPQIPSHHAALALGILHARFSHKSHASAALR
DALRCAQAAGDAQSQNVALQWLARMDNPEQASSLLRHAHDDLALVRHQLL
TDSPPPPSAFSKLRNSVDALLLSASAWQLRAAVPTALCVARAALARAEKH
EPLPESVARATVTVAELTALEGDHEPAMAMLEQCIKRLERPPDCSTAAPE
IFMLQRSLTMLRFEASVRAMQLSDACALCDRIKAFALCSASNALAFSAED
VALDAIQAHVKCLLMASDTRGAADEALNLARKAAVSSRPERVVTGLTMRA
EAFLNSGEAGGAFSDALAAVSLASAMRLDSAHVKASLAAAEAMLRMDSPA
SQVLEILVPVLPRALDGLGCDVRSYACRLHAECLTKKCDENGSVPDEKVV
RLVQQALDGYRASGHANGIRDCLYMLARIHNWRNEIALRNRMSCLFRQHV
HGIGRRKTPSHAIET*
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mRNA from alignment at tig00000007_pilon:569106..571103-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1998bp|location=Sequence derived from alignment at tig00000007_pilon:569106..571103- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGCCGCCTGCCGCCGCCCGCTTCCTCACCGCCCCCAACCTTCTCCT
CGCACTGGCCGCCTCCATCCCCGCCATCGCGCGCACTCGCCACCCCTTCT
ACCCGCCCATGCACGCGCTTGTCACGTCGCCACCGCCGCACTCGCACCTT
CTGCACGCTCTGTCCGCCCTCGTCGTCCACGTCAACCCCGCCGCTGCCGC
TCCATACCTCTCACAACCGGTCGATGACGCTCCATTGTCACTCCTCCGCC
TGCTCGTCGCCCTGCTTCGCCGCGCGCTCTCCTCACCGCATGCGCTCACA
CAGTTGCTTCGCATTGTCGAGCAGCACACTGACGCCGATTTGCTCGGCGC
CTATCAACCCGACTCTCGCATCACACTTTTTCTCAGGAAGGTCGTCGTCG
CCTTTCATTCCCTCTCCTTTGAGTCGCTCGTTCGTTTACAACATGCACTT
CACAACCATTACCCCCCCACCTTCGACCTCTCCCTGCACGCCAAACGTCT
GGCTGACTCTCACCCGCTTCCAAACCCTGTGTTCGAACAGCTCTCAATCC
GTCCGCGCAAACCATCCCCACTAAGCATGCTAACACACCTAGAGTCCGCC
CGTCGCGCCGACTTTTCCACCGCGCTTGCAGCCGCACATCGCCACTTTGA
CACCCACGCTCCACAGATACCGTCGCATCACGCCGCCCTCGCGCTGGGAA
TCCTGCACGCCCGCTTCTCACACAAGTCGCATGCGTCCGCCGCTCTACGA
GACGCTCTACGCTGCGCACAGGCTGCCGGAGACGCACAATCCCAAAACGT
TGCCTTGCAATGGCTTGCTCGCATGGACAACCCAGAGCAGGCCAGCTCTT
TGCTGCGTCATGCCCATGACGACCTAGCTCTTGTCCGTCATCAGTTGCTC
ACCGACTCTCCGCCCCCGCCGTCTGCGTTTTCAAAGCTGCGAAATTCAGT
CGACGCTCTCTTGCTTTCCGCCTCTGCGTGGCAGCTTCGCGCTGCCGTTC
CCACCGCCTTGTGTGTAGCGCGTGCCGCGCTCGCTCGCGCGGAGAAGCAC
GAACCGCTTCCAGAGTCCGTTGCACGCGCCACGGTTACAGTTGCTGAGCT
CACGGCATTGGAGGGCGATCATGAGCCGGCGATGGCAATGCTTGAGCAGT
GCATCAAGCGGCTTGAGCGCCCACCCGATTGTTCTACAGCAGCGCCGGAG
ATCTTCATGCTGCAGCGCTCGCTCACCATGCTCCGTTTTGAAGCAAGCGT
ACGAGCGATGCAACTGTCTGACGCGTGCGCCCTGTGCGACAGGATCAAGG
CATTTGCGTTGTGTTCTGCATCCAACGCTCTGGCATTTAGTGCGGAAGAT
GTTGCGTTGGATGCCATTCAAGCTCATGTCAAGTGTCTGCTGATGGCCTC
TGATACGCGTGGCGCCGCTGATGAAGCGCTCAATCTGGCTCGAAAGGCTG
CCGTGTCGAGCAGACCGGAGCGTGTTGTGACTGGCCTAACAATGCGCGCT
GAGGCTTTTCTCAACTCCGGGGAGGCTGGCGGCGCCTTTTCAGATGCCTT
GGCTGCTGTATCTTTGGCCAGTGCGATGCGACTGGACTCTGCGCATGTCA
AGGCTTCTCTGGCTGCTGCTGAGGCAATGTTGAGGATGGACTCACCTGCA
AGCCAAGTGCTTGAAATTCTAGTGCCGGTATTGCCAAGAGCACTTGACGG
ACTAGGATGTGATGTGCGGTCGTACGCGTGTCGACTTCATGCCGAATGCC
TGACAAAGAAGTGCGATGAAAACGGCTCGGTTCCAGATGAGAAGGTTGTT
AGACTTGTGCAACAAGCACTTGACGGCTATAGAGCTAGTGGTCATGCTAA
TGGTATACGTGATTGTCTCTACATGTTAGCTAGAATCCATAACTGGAGGA
ATGAAATTGCGCTGCGAAATCGCATGTCGTGTCTGTTTAGACAGCATGTG
CACGGAATTGGGAGACGAAAAACTCCATCGCATGCGATCGAAACCTGA
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Coding sequence (CDS) from alignment at tig00000007_pilon:569106..571103-

>Gchil7347.t1 ID=Gchil7347.t1|Name=Gchil7347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1998bp|location=Sequence derived from alignment at tig00000007_pilon:569106..571103- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGCCGCCTGCCGCCGCCCGCTTCCTCACCGCCCCCAACCTTCTCCT
CGCACTGGCCGCCTCCATCCCCGCCATCGCGCGCACTCGCCACCCCTTCT
ACCCGCCCATGCACGCGCTTGTCACGTCGCCACCGCCGCACTCGCACCTT
CTGCACGCTCTGTCCGCCCTCGTCGTCCACGTCAACCCCGCCGCTGCCGC
TCCATACCTCTCACAACCGGTCGATGACGCTCCATTGTCACTCCTCCGCC
TGCTCGTCGCCCTGCTTCGCCGCGCGCTCTCCTCACCGCATGCGCTCACA
CAGTTGCTTCGCATTGTCGAGCAGCACACTGACGCCGATTTGCTCGGCGC
CTATCAACCCGACTCTCGCATCACACTTTTTCTCAGGAAGGTCGTCGTCG
CCTTTCATTCCCTCTCCTTTGAGTCGCTCGTTCGTTTACAACATGCACTT
CACAACCATTACCCCCCCACCTTCGACCTCTCCCTGCACGCCAAACGTCT
GGCTGACTCTCACCCGCTTCCAAACCCTGTGTTCGAACAGCTCTCAATCC
GTCCGCGCAAACCATCCCCACTAAGCATGCTAACACACCTAGAGTCCGCC
CGTCGCGCCGACTTTTCCACCGCGCTTGCAGCCGCACATCGCCACTTTGA
CACCCACGCTCCACAGATACCGTCGCATCACGCCGCCCTCGCGCTGGGAA
TCCTGCACGCCCGCTTCTCACACAAGTCGCATGCGTCCGCCGCTCTACGA
GACGCTCTACGCTGCGCACAGGCTGCCGGAGACGCACAATCCCAAAACGT
TGCCTTGCAATGGCTTGCTCGCATGGACAACCCAGAGCAGGCCAGCTCTT
TGCTGCGTCATGCCCATGACGACCTAGCTCTTGTCCGTCATCAGTTGCTC
ACCGACTCTCCGCCCCCGCCGTCTGCGTTTTCAAAGCTGCGAAATTCAGT
CGACGCTCTCTTGCTTTCCGCCTCTGCGTGGCAGCTTCGCGCTGCCGTTC
CCACCGCCTTGTGTGTAGCGCGTGCCGCGCTCGCTCGCGCGGAGAAGCAC
GAACCGCTTCCAGAGTCCGTTGCACGCGCCACGGTTACAGTTGCTGAGCT
CACGGCATTGGAGGGCGATCATGAGCCGGCGATGGCAATGCTTGAGCAGT
GCATCAAGCGGCTTGAGCGCCCACCCGATTGTTCTACAGCAGCGCCGGAG
ATCTTCATGCTGCAGCGCTCGCTCACCATGCTCCGTTTTGAAGCAAGCGT
ACGAGCGATGCAACTGTCTGACGCGTGCGCCCTGTGCGACAGGATCAAGG
CATTTGCGTTGTGTTCTGCATCCAACGCTCTGGCATTTAGTGCGGAAGAT
GTTGCGTTGGATGCCATTCAAGCTCATGTCAAGTGTCTGCTGATGGCCTC
TGATACGCGTGGCGCCGCTGATGAAGCGCTCAATCTGGCTCGAAAGGCTG
CCGTGTCGAGCAGACCGGAGCGTGTTGTGACTGGCCTAACAATGCGCGCT
GAGGCTTTTCTCAACTCCGGGGAGGCTGGCGGCGCCTTTTCAGATGCCTT
GGCTGCTGTATCTTTGGCCAGTGCGATGCGACTGGACTCTGCGCATGTCA
AGGCTTCTCTGGCTGCTGCTGAGGCAATGTTGAGGATGGACTCACCTGCA
AGCCAAGTGCTTGAAATTCTAGTGCCGGTATTGCCAAGAGCACTTGACGG
ACTAGGATGTGATGTGCGGTCGTACGCGTGTCGACTTCATGCCGAATGCC
TGACAAAGAAGTGCGATGAAAACGGCTCGGTTCCAGATGAGAAGGTTGTT
AGACTTGTGCAACAAGCACTTGACGGCTATAGAGCTAGTGGTCATGCTAA
TGGTATACGTGATTGTCTCTACATGTTAGCTAGAATCCATAACTGGAGGA
ATGAAATTGCGCTGCGAAATCGCATGTCGTGTCTGTTTAGACAGCATGTG
CACGGAATTGGGAGACGAAAAACTCCATCGCATGCGATCGAAACCTGA
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