Gchil8933.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8933.t1
Unique NameGchil8933.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length496
Homology
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A2V3IJZ6_9FLOR (Signal recognition particle 54 kDa protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJZ6_9FLOR)

HSP 1 Score: 820 bits (2117), Expect = 3.570e-297
Identity = 418/460 (90.87%), Postives = 435/460 (94.57%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMMA 460
            MVLEGLGSRI+GALRKMT+STVIDE ALKEMLKEI HALLEADVNIK+V QLRKNVT RVKLEELAAGVNKRK+IQKAVFDELCSMLDPGT P  LKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQNATKAKVPF GSYTETDPVKIATDGV RFKNE  DLIIVDTSGRHKQE+ALFAEMEQMA+++NPTDIIFVMDS+IGQAAYDQALAF+  V VGSVIITKLDGHAKGGGALSAVSAT+SPITFIGTGEH+DEFEPF TQAFVGRLLG+GDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGM+E+MKNTNGVDGSVRIKRFQHIMDSMTM+EME+PKVNF ASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTS       DPRMMA
Sbjct:    1 MVLEGLGSRISGALRKMTDSTVIDETALKEMLKEINHALLEADVNIKSVVQLRKNVTERVKLEELAAGVNKRKVIQKAVFDELCSMLDPGTAPVTLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKACLVCADTFRAGAFDQLKQNATKAKVPFFGSYTETDPVKIATDGVNRFKNEGYDLIIVDTSGRHKQEEALFAEMEQMAESVNPTDIIFVMDSAIGQAAYDQALAFRAKVKVGSVIITKLDGHAKGGGALSAVSATKSPITFIGTGEHIDEFEPFKTQAFVGRLLGLGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMAEMMKNTNGVDGSVRIKRFQHIMDSMTMKEMEDPKVNFTASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTFQQFMDPRMMA 460          
BLAST of Gchil8933.t1 vs. uniprot
Match: R7QA53_CHOCR (Signal recognition particle 54 kDa protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA53_CHOCR)

HSP 1 Score: 793 bits (2048), Expect = 1.020e-286
Identity = 401/460 (87.17%), Postives = 426/460 (92.61%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMMA 460
            MVLE LG RITGALRKMTNSTVIDEEALKEMLKEI HALLEADVNIK+V +LRKNVTNRV LEELAAGVNKRKLIQKAVFDELCSMLDPGTKP  +KRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQ+ATKAKVPF GSYTETDPVKIA DGV+RF+NE  DLIIVDTSGRHKQE +LFAEMEQMAQA++P DIIFVMDS+IGQAA+DQA AFK  V VGSVIITKLDGHAKGGGALSAVSAT+SPITFIGTGEH+DEFEPF+TQ FVGRLLGMGDVSGLVNTIKEAGLHENVEM KRITEG+FTLRDMYDQ +S++KLGPLNKVMGM+PGMSE+M+N  GVDGSVRIKRFQHIMDSMT++EMENPK+NF  SRKERIARG GRHPQEVEELL+EYKRFSKVVGKVGKMSKKNMNIDQLSRNTS       DPRMMA
Sbjct:    1 MVLESLGGRITGALRKMTNSTVIDEEALKEMLKEIAHALLEADVNIKSVVELRKNVTNRVNLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPVQMKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKACLVCADTFRAGAFDQLKQSATKAKVPFYGSYTETDPVKIAADGVDRFRNEGYDLIIVDTSGRHKQEDSLFAEMEQMAQAVDPNDIIFVMDSAIGQAAHDQAQAFKSKVKVGSVIITKLDGHAKGGGALSAVSATESPITFIGTGEHIDEFEPFNTQNFVGRLLGMGDVSGLVNTIKEAGLHENVEMVKRITEGIFTLRDMYDQFDSLAKLGPLNKVMGMLPGMSEMMQNAKGVDGSVRIKRFQHIMDSMTVDEMENPKMNFTQSRKERIARGCGRHPQEVEELLMEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTFQQFMDPRMMA 460          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A5J4YTS9_PORPP (Signal recognition particle 54 kDa protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTS9_PORPP)

HSP 1 Score: 647 bits (1670), Expect = 3.640e-229
Identity = 333/464 (71.77%), Postives = 382/464 (82.33%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSK-KNMNIDQLSR----NTSXXXXXXXDPRMM 459
            MVL  LG +IT ALR+MTNSTVIDE+AL +MLKE++ ALLEADVN++ VAQLR NV  RV LEELAAGVNKRKLIQKAVF+ELC MLDPG KP  LK+GKPNVVMFVGLQGNGKTTSC KYAYYHQRKGWK  LVCADTFRAGAFDQLKQNATKAK+PF GSYTETDPVKIA +GVERFK +  +LIIVDTSGRHKQE ALF EM+QMA  + P DI+FVMDSSIGQAAYDQALAFK+ V VGSVIITKLDGHAKGGGALSAVSAT+SPI FIGTGEHMD+ E F++ +FV RLLGMGDVSGLV +IKEAGL +N EMYKR+ EG FTLRDMYDQ  +ISKLGPL KVMGMIPGMSE++      +G  R+ +F  IMDSMT +E++N KV F+ SR  R+ARGSG HP+ VEELL+E+KRF +VV ++GKM   K  N++++S+    N S       DPRM+
Sbjct:    1 MVLNELGKKITSALRRMTNSTVIDEQALDDMLKEVSRALLEADVNVRIVAQLRTNVKKRVNLEELAAGVNKRKLIQKAVFEELCEMLDPGNKPVALKKGKPNVVMFVGLQGNGKTTSCAKYAYYHQRKGWKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIALEGVERFKADNYELIIVDTSGRHKQESALFEEMQQMADTIQPADIVFVMDSSIGQAAYDQALAFKQAVKVGSVIITKLDGHAKGGGALSAVSATESPIVFIGTGEHMDDLEAFNSVSFVQRLLGMGDVSGLVTSIKEAGLDQNPEMYKRVMEGQFTLRDMYDQFSNISKLGPLGKVMGMIPGMSEMIPKGKEEEGGARVAKFCSIMDSMTDDELDNAKVTFSPSRILRVARGSGCHPRLVEELLVEHKRFRQVVERMGKMKALKGGNMNEMSKTMPANLSAQLSKAMDPRML 464          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A7S0ZHG9_9RHOD (Signal recognition particle 54 kDa protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHG9_9RHOD)

HSP 1 Score: 642 bits (1656), Expect = 4.380e-227
Identity = 328/464 (70.69%), Postives = 379/464 (81.68%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSK-KNMNIDQLSR----NTSXXXXXXXDPRMM 459
            MVL  LG +IT ALR+MTN+TVIDE+ L +MLKE+  ALLEADVN+K+VAQLR NV  RV LEELAAGVNKRKLIQKAVFDELC MLDPG KP  LK+GKPNVVMFVGLQGNGKTTSC KYAYYHQR+GWK  +VCADTFRAGAFDQLKQNATKAK+PF GSYTETDPVKIA +GV+RFK +  +LI+VDTSGRH+QE ALF EME M   LNP D++FVMDSSIGQAAY+ A AF+  V VGSVI+TKLDGHAKGGGALSAVSAT+SPITFIGTGEHMDE EPF+  +FV RLLGMGDVSGLV T+KEAG+  N E+YKR+ EG FTLRDMYDQ ++ISKLGPL KVMGMIPGMSE++      +G+ RI +F  +MDSMT +E++N KV F+ASR  RIARGSG HP+ VEELL+EYKRFSKVV ++GKM   K   ++ +S+    N S       DPRM+
Sbjct:    1 MVLNELGKKITSALRRMTNTTVIDEQVLDDMLKEVARALLEADVNVKHVAQLRSNVKRRVNLEELAAGVNKRKLIQKAVFDELCEMLDPGNKPVTLKKGKPNVVMFVGLQGNGKTTSCAKYAYYHQRRGWKTCMVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIAKEGVDRFKADHYELIVVDTSGRHRQESALFDEMEMMFDVLNPADVVFVMDSSIGQAAYEHAKAFRSRVKVGSVIVTKLDGHAKGGGALSAVSATESPITFIGTGEHMDELEPFNAVSFVQRLLGMGDVSGLVTTMKEAGIDNNPELYKRVMEGQFTLRDMYDQFQNISKLGPLGKVMGMIPGMSEMIPKGKEDEGAARIGKFCVMMDSMTDDELDNQKVVFSASRILRIARGSGCHPRMVEELLVEYKRFSKVVERMGKMKGLKGAGMNDMSKGMPANLSSQLTKAMDPRML 464          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A7S1XFD6_9RHOD (Signal recognition particle 54 kDa protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFD6_9RHOD)

HSP 1 Score: 627 bits (1616), Expect = 4.230e-221
Identity = 316/459 (68.85%), Postives = 373/459 (81.26%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMM 459
            MVL  LG +I GALRKMTN T+ID+EA+  MLKEI+ ALLEADVN+K VAQLR NV   V L+ELAAG NKR++IQKAVFDELC MLD G KP VLK+GKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  +VCADTFRAGAFDQL+QN  KAK+P+ GSY+ETDPVKIA DGVERF+ EK +LI+VDTSGRHKQE ALF EMEQMA A+ P D++FVMDSSIGQAA+D ALAF++ V VGSVIITKLDGHAKGGGALSAVSATQSPITFIG GEH+DEFEPF TQ FVGRLLG+GDVSGLV TIKEAGLH+N ++Y+ IT GVFTLRD+YDQ ++++KLGPL ++M M+PGMSE+M      +G  +I++F  +MDSMT +E+++ K  F+ SR  RIARGSGR  Q+V EL+ E+KRF+K+VGK+GKM        +   N         DPRM+
Sbjct:    1 MVLNDLGKKINGALRKMTNLTIIDDEAVDAMLKEISRALLEADVNVKTVAQLRGNVKKSVNLDELAAGHNKRRMIQKAVFDELCKMLDSGRKPVVLKKGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKTCVVCADTFRAGAFDQLRQNCLKAKIPYYGSYSETDPVKIAMDGVERFRIEKYELIVVDTSGRHKQEAALFEEMEQMAAAIEPNDVVFVMDSSIGQAAHDHALAFRQRVDVGSVIITKLDGHAKGGGALSAVSATQSPITFIGVGEHIDEFEPFSTQNFVGRLLGLGDVSGLVTTIKEAGLHDNQKLYENITHGVFTLRDLYDQFQALTKLGPLGQLMSMMPGMSEMMPAGGEREGKAKIQKFLTMMDSMTDKELDDAKAQFSESRMYRIARGSGRSLQDVNELIHEHKRFAKLVGKLGKMKGMKTGNAKDLENMPQQLSRIMDPRML 459          
BLAST of Gchil8933.t1 vs. uniprot
Match: M2Y539_GALSU (Signal recognition particle 54 kDa protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y539_GALSU)

HSP 1 Score: 601 bits (1550), Expect = 3.890e-211
Identity = 297/460 (64.57%), Postives = 371/460 (80.65%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGK-MSKKNMNIDQLSRNTSXXXXXXXDPRMM 459
            MVL  LG +I+GALRK+ N TV+DEEAL EML E++ ALLEADVN+K V  LR++V  +V LEELAAGVN+RKLIQKAVF+ELC+ML PGT P  LK+G+PNVVMFVGLQGNGKTT+CVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQ+ATKA+VPF GS+TETD VK+A +GV+ F+ EK +LIIVDTSGRHKQ+ ALF EMEQ+AQA+ P  IIFVMD ++GQ+ YDQALAF++ V+VGSV++TKLDGHAKGGGALSAVSAT+SP+ FIGTGE +D+ EPF  Q+FV RLLG+GD+SG VN +KEAG+ +N ++ KRI EGV TLRD+YDQ +S+ K+GP+ KV+ M PGM +++      +G++R+K+F  IM+SMT +E++NPKV FN SR  RI RGSGR  ++VE+LL EYKR SK+V +VGK  + K  +  QL RN         DP+M+
Sbjct:    1 MVLSELGKKISGALRKLANRTVVDEEALNEMLNEVSRALLEADVNVKMVQALRQSVKKKVNLEELAAGVNRRKLIQKAVFEELCNMLSPGTSPPPLKKGRPNVVMFVGLQGNGKTTTCVKYAYYHQRKGWKTALVCADTFRAGAFDQLKQSATKARVPFYGSHTETDAVKVAREGVDLFRKEKYELIIVDTSGRHKQDTALFEEMEQIAQAVQPNSIIFVMDGTMGQSVYDQALAFRQRVNVGSVVVTKLDGHAKGGGALSAVSATKSPVVFIGTGEMLDDLEPFAPQSFVQRLLGLGDISGFVNAVKEAGVDQNPDILKRIQEGVLTLRDLYDQFQSVLKMGPMGKVLSMFPGMQDLIPKGKEREGTLRVKKFLSIMNSMTDDELDNPKVQFNQSRMIRIGRGSGRDVKDVEDLLAEYKRLSKLVSRVGKNKALKTGDFSQLQRNMPQQLSRMMDPKML 460          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A1X6NR23_PORUM (Signal recognition particle 54 kDa protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR23_PORUM)

HSP 1 Score: 585 bits (1509), Expect = 1.590e-204
Identity = 302/436 (69.27%), Postives = 357/436 (81.88%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGK-PNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNT---NGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKM 432
            MVL  LG +I+ A+++M+ +TV DE  LK+ML EI  ALLEADVN++ V QLR NV   V L  L AGVNK KLIQKAVFDELC MLD G KP  LKRG   NVVMFVGLQGNGKTT+C KYAY++ RKGWK  LVCADTFRAGAFDQLKQNATKAK+PF GSYTETDPV IAT GV+RF+ E+ DLI+VDTSGRHKQE ALF EMEQMA A+ PTDI+FVMDSSIGQAA+DQA AF+  V+VGSVIITKLDGHAKGGGALSAV+AT+SPITFIGTGEH+DEFEPF  + FVGRLLGMGDVSGL++TI++AGL  N +M KR+T GVFTLRDM +Q E I+++GPL+KVMGMIPG+S+++      NG +G+ RI+ F ++MD+MT EE++NPK+ +  SR  R+ARGSGRHP EVE LL EYKRF+K+V  VG M
Sbjct:    1 MVLNELGGKISAAIKRMSANTVPDETVLKQMLSEIARALLEADVNVRAVQQLRGNVLAAVDLSALGAGVNKVKLIQKAVFDELCRMLDAGQKPVALKRGHGSNVVMFVGLQGNGKTTTCAKYAYHYSRKGWKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIATAGVDRFRAERYDLIVVDTSGRHKQEVALFDEMEQMAAAVEPTDIVFVMDSSIGQAAHDQAAAFRSRVAVGSVIITKLDGHAKGGGALSAVAATRSPITFIGTGEHIDEFEPFAAERFVGRLLGMGDVSGLMSTIQDAGLANNPDMVKRLTGGVFTLRDMNEQFEGIARMGPLDKVMGMIPGLSQMLPEGAAGNGSEGAKRIQVFGYMMDAMTDEELDNPKIVWCQSRIRRVARGSGRHPAEVEGLLTEYKRFAKMVQSVGSM 436          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A7S2ZCB6_9RHOD (Signal recognition particle 54 kDa protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZCB6_9RHOD)

HSP 1 Score: 582 bits (1501), Expect = 1.040e-203
Identity = 300/445 (67.42%), Postives = 357/445 (80.22%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSK-KNMNIDQLSR 444
            MVL  LG RI  A+R M+++TVIDE  +KEML EI+ ALLEADVNIK VAQL+  V NRVK EELAAGVNKRK+IQ AV DELC++LD G  P  LK+GK NV+MFVGLQGNGKTT+CVKYA+YHQRKGWK  LVCADTFRAGAFDQLKQNATKA++PF GSYTETDPVK+A +GV RFK +K +LIIVDTSGRHKQE+ALF EMEQM++A+NP DIIFVMDSSIGQAA DQA AF+  VSVGSVI+TKLDGHAKGGGALSAVS T SPITFIG GEHM +FEPF+TQ+FVGRLLG+GD+SGL+N I EA + ++V  Y+RI EG FTLRDM DQ E+I KLGPL+ VM M+P M  ++    G +G  R+K+F  IMDSMT  E++NPK+ F   R+ RIARG+G  P +V  LL ++K F+ VV K+G M   KN N++ L +
Sbjct:    1 MVLGDLGKRINRAIRLMSDATVIDEAVVKEMLNEISKALLEADVNIKYVAQLKNRVLNRVKFEELAAGVNKRKMIQGAVVDELCALLDSGRDPVPLKKGKSNVIMFVGLQGNGKTTTCVKYAHYHQRKGWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTETDPVKLAIEGVNRFKLDKFELIIVDTSGRHKQEKALFEEMEQMSEAVNPNDIIFVMDSSIGQAAEDQAKAFRSSVSVGSVIVTKLDGHAKGGGALSAVSGTGSPITFIGIGEHMTDFEPFNTQSFVGRLLGLGDISGLMNMINEADIDKDV--YERIAEGHFTLRDMRDQFENIGKLGPLSSVMTMLPHMQNLLPAGKGKEGEERVKQFMVIMDSMTDAELDNPKIQFTTEREMRIARGAGVFPTDVRMLLKQHKEFAGVVEKMGSMKGLKNGNVNMLGK 443          
BLAST of Gchil8933.t1 vs. uniprot
Match: L1K0T6_GUITC (Signal recognition particle 54 kDa protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0T6_GUITC)

HSP 1 Score: 566 bits (1459), Expect = 3.890e-197
Identity = 287/465 (61.72%), Postives = 362/465 (77.85%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVN--FNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMS-KKNMNIDQLSRNTSXXXXXXX---DPRMM 459
            MVL  LG RI  A+R MT+ TVIDEEA+  MLKEI+ ALL +DVN+K V+ LRKNV NR+ LE+LA G+N+R++IQ+AVF+ELC ML+PG KP   K+GKPNV+MFVGLQG+GKTTSC KYA ++QRK WK  LVC+DTFRAGAFDQLKQNATKA++PF GSYTE DPVKIA DGVE FK E  ++IIVDTSGRHKQE +LF EM+Q+A A+ P DI+FV+DSSIGQAA+DQA AFK+ VSVGSVI+TKLDGHAKGGGALSAV+AT SPI FIGTGEH D+FE F+ ++FV RLLG+GDV GL+N IK+AGL +  E+Y+++++GVFTLRDMY+Q +++ K+GP+ KVM MIPGMS +M      +   R K+F  IMDSMT +E++   VN  F  +R  RIA+GSG HPQ+V EL+ E+KRF K++ K+  +   KN  + Q++RN            DPRM+
Sbjct:    1 MVLAELGGRIAQAMRSMTSKTVIDEEAVDNMLKEISSALLSSDVNVKLVSSLRKNVKNRINLEDLATGLNRRRMIQQAVFEELCEMLNPGKKPYQPKKGKPNVIMFVGLQGSGKTTSCTKYALHYQRKSWKTCLVCSDTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIARDGVEMFKKEGQEIIIVDTSGRHKQEASLFEEMQQIAAAVEPDDIVFVLDSSIGQAAHDQATAFKEAVSVGSVIMTKLDGHAKGGGALSAVAATSSPIVFIGTGEHFDDFETFEVRSFVSRLLGLGDVGGLMNAIKDAGLDKQPELYQKLSQGVFTLRDMYEQFQNVMKMGPIGKVMSMIPGMSALMTKGREHESQERFKKFMTIMDSMTDDELDTENVNKIFTDTRVFRIAQGSGSHPQQVWELIEEFKRFQKMIAKMKHLKIGKNGEMPQMTRNPQQAMQQMGKCLDPRML 465          
BLAST of Gchil8933.t1 vs. uniprot
Match: A0A6U4SDV9_HEMAN (Signal recognition particle 54 kDa protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4SDV9_HEMAN)

HSP 1 Score: 562 bits (1449), Expect = 3.180e-195
Identity = 290/465 (62.37%), Postives = 358/465 (76.99%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKLDGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEM--ENPKVNFNASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMS-KKNMNIDQLSRNTSXXXXXXX---DPRMM 459
            MVL  LG RI+ ALR MT +T++DEEA+  MLKEI  ALL ADVNIK VA+LRKNV NR+ L+ELA G+N+RK+IQ+AVFDELC ML P  KP V K+G+PNV+MFVGLQG+GKTTSC K+A ++ RK WK  LVCADTFRAGAFDQLKQNATKA++PF GSYTE DPVKIA DGV+ FK E  ++IIVDTSGRHKQE +LF EM+Q++ A++P D++FV+DSSIGQAA DQA AFK+ VSVGSVI+TKLDGHAKGGGALSAV+AT+SPI FIGTGEH D+FE F+ ++FV RLLGMGDV GL+N IK+AGL +  E+Y+++ +GVFTLRDMY+Q +++ K+GPL KVM MIPGMS +M      +   R K+F  IMDSM  +E+  EN       SR  RIA+GSG HPQ V ELL E+KRF K+VGK+  +   KN  + Q++RN            DPRM+
Sbjct:   28 MVLADLGGRISAALRTMTTNTILDEEAVDAMLKEIGTALLAADVNIKLVAKLRKNVKNRINLDELATGMNRRKMIQQAVFDELCDMLSPPVKPYVPKKGRPNVIMFVGLQGSGKTTSCTKFALHYHRKSWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIAQDGVDMFKAEGQEIIIVDTSGRHKQEASLFEEMQQISAAVSPDDVVFVLDSSIGQAAQDQAQAFKETVSVGSVIMTKLDGHAKGGGALSAVAATESPIVFIGTGEHFDDFEVFEVRSFVSRLLGMGDVGGLMNAIKDAGLDKQPELYQKLQQGVFTLRDMYEQFQNVMKMGPLGKVMSMIPGMSAMMTKGKEHESQARFKKFMTIMDSMNDDELDTENTTKMMTESRVFRIAQGSGSHPQHVWELLEEFKRFQKMVGKMKHLKIGKNGEMPQMNRNQKQAMQQMGKCLDPRML 492          
The following BLAST results are available for this feature:
BLAST of Gchil8933.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJZ6_9FLOR3.570e-29790.87Signal recognition particle 54 kDa protein n=1 Tax... [more]
R7QA53_CHOCR1.020e-28687.17Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A5J4YTS9_PORPP3.640e-22971.77Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S0ZHG9_9RHOD4.380e-22770.69Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S1XFD6_9RHOD4.230e-22168.85Signal recognition particle 54 kDa protein n=1 Tax... [more]
M2Y539_GALSU3.890e-21164.57Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A1X6NR23_PORUM1.590e-20469.27Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S2ZCB6_9RHOD1.040e-20367.42Signal recognition particle 54 kDa protein n=2 Tax... [more]
L1K0T6_GUITC3.890e-19761.72Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A6U4SDV9_HEMAN3.180e-19562.37Signal recognition particle 54 kDa protein n=3 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 2.2E-20
score: 83.7
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 2.6E-20
score: 72.4
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 101..296
e-value: 2.8E-93
score: 325.9
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 101..296
e-value: 9.1E-76
score: 253.9
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 269..282
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..285
e-value: 1.1E-125
score: 420.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 97..298
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 6..305
e-value: 1.1E-125
score: 420.5
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 311..441
e-value: 1.1E-39
score: 137.6
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 298..429
IPR006325Signal recognition particle, SRP54 subunit, eukaryoticTIGRFAMTIGR01425TIGR01425coord: 2..424
e-value: 5.6E-194
score: 642.8
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 327..425
e-value: 1.3E-31
score: 109.3
NoneNo IPR availablePANTHERPTHR11564:SF5SIGNAL RECOGNITION PARTICLE 54 KDA PROTEINcoord: 1..483
NoneNo IPR availableCDDcd17875SRP54_Gcoord: 102..294
e-value: 2.36803E-134
score: 384.237
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 1..483
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..472
score: 35.296204
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:218484..219971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8933.t1Gchil8933.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 218484..219971 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8933.t1 ID=Gchil8933.t1|Name=Gchil8933.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=496bp
MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVA
QLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPAVLKRGK
PNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQ
NATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQA
LFAEMEQMAQALNPTDIIFVMDSSIGQAAYDQALAFKKMVSVGSVIITKL
DGHAKGGGALSAVSATQSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDV
SGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMG
MIPGMSEIMKNTNGVDGSVRIKRFQHIMDSMTMEEMENPKVNFNASRKER
IARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTF
QQFMDPRMMAQLGGQGGMQSMMKQLAKSMDGKGGLGALAGLKGLK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase
IPR042101SRP54_N_sf
IPR036891Signal_recog_part_SRP54_M_sf
IPR006325SRP54_euk
IPR004125Signal_recog_particle_SRP54_M
IPR022941SRP54
IPR036225SRP/SRP_N