Gchil9213.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9213.t1
Unique NameGchil9213.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length930
Homology
BLAST of Gchil9213.t1 vs. uniprot
Match: A0A2V3J2Z9_9FLOR (G-patch domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z9_9FLOR)

HSP 1 Score: 643 bits (1659), Expect = 2.260e-214
Identity = 404/948 (42.62%), Postives = 555/948 (58.54%), Query Frame = 0
Query:    7 TVPTSPYEASDSDPPPVLQRLAQSRKARKRHRASSAVIIARNLRWSKRQEKSLLQAPMQPTLSEDEEDQDPVLPTLRRTKKNLAAFKSLPRPSEVVQEIEAGSAPEAGLPLKLKEVHYRRVKATTLKMQNLTTHGKAQPVPSWSRINRGLRAYSSYLQPPMEDRHLKLLRVPKQLLPSYYRGTLLKVYKIGDHRPEKRPRTSNASQSSDPAQSMVDFMYWATTSGES--TDAKKQAPLASLEFIAEPHEQQDADRQPSKTGIIGDETDHSAPLLATAVEIEARRSEAGVMLSKVKENFQKRAYVQQIKNLAQTDDDSLSSEADSSSVALSPLPVDITSNSEGNAQEKRQEDSE--KNQDEELLRLLQGHLDEELN--ASPKPGDDD----EKEKDLCILQDVGKNNQDNKTNG-VSMSVELQKPSSSFEKEREVAMEFCQASHKRPRAQAFVDATLLLASDARRKTGATRTSEAKEPTKKPIKERYAMKVLKKMGFNGRLGAREDGRSAPLEATNNVARSGLGAQPTEVVSHARNLLSEYELSESQSRDR----PKMDLNPVDIDPEPEEVER-HPLFPCAPPSHVFPNTTYGEIEKEAPGI---------RSPEKANPSTQRDDDEKDLE--DEWETEVEDKVLDNPRRALIVDMDVIIKDSHVRRKKAVKSMLTISKEFSDDKVDLDDVYTKVGHDLTDKDIVMNLLGHYQIAFSKEKLKTVLEQLDVCYERLGPCELVANFWSCRIEETFSCALLHRGSQNRMEREVKDLGLHESAFLFFTLQSCEGWPYTQIWKDVFCQLGVPPRQGGIVSLQTAKILSGRVAAAVLGARVETCSRTPNEDGCCLNSS-SASAHETLKRMVEHLQSTNLAALPRRLRVLFLSEGDNMWYAGCVQFEHESKALVCSYNSGRLVWVDKDAFVALSRANYRKLRGIDFGGLLEPEDV 926
            ++P   YEAS+S+ P  L  L  SRK RKRHR+SS  + AR  RW  RQ   L +   +PTLSEDE D  P LP+L RTK+NLA  K LPRPSEVV  I+ GSAPEAGL  + +E H+RR+KAT L+MQ L   G  +PVP+WSR NRGL+ YS+YL PP+EDR + L+R P++LL SYYRGTLLKVYK+GD RP  R    + S  SDP  SMVDFMYWA+TS ++  T  ++Q    + E   +   +  A  QP K G    +     P L TA EIEARR EA  ML+KV+  F+K+ +V  I   AQ DDDSL+SE+D+SSV   P P++      G    + +E S+  + Q  +L+ LL G L+E L    S +  +D     E++  +   +DV +   +  T G V    ++ +P   F++ RE AM FCQA +KRPRAQAF++AT       RR+T     +       K      A+K++KKMGF  RLGAREDGR+ PLEAT    RSGLGA P +VVS   +LLSE E++      R    P+     + IDP P   ++ H        S     +  G  ++    +          +  K NPS++    +K+L+  DE ETE+ED  +DN RRA+I+DMD I+K S  RR KA   M   S+ F   + +L+DV   V HD TD + +  ++    I+ + EK+  +L+ LD CYERLGP E   NF    + E   C +LHRGSQ R++RE+++L +H   F+    +S + WPY + WKD+FCQLGV PRQGGI+  Q +K +SG VAA VLGA    C+  P +     + + S +  +   R++++L+++      RR RVLF S   +MW+AG V+FE+E   L+    S R  W +KDA + L RA+YRKL+ I+F GLLEPED+
Sbjct:    2 SLPLKNYEASESERPQALATLTDSRKLRKRHRSSSTTVTARTERWKHRQALRLKECQTEPTLSEDESDYLPQLPSLHRTKQNLARLKRLPRPSEVVYAIDEGSAPEAGLSPEKREAHHRRIKATALRMQYLDGSGNPRPVPAWSRANRGLKPYSAYLLPPVEDRDITLVRAPRELLSSYYRGTLLKVYKMGDPRPTDRKTPKDGSCVSDPLDSMVDFMYWASTSEDNILTANEEQDSTVNAETPKQSKHESPAIEQP-KRGQNDHKQTSEMPTLGTAAEIEARRLEAKQMLAKVRCQFRKKDFVADIMKSAQQDDDSLTSESDTSSVGPFP-PLECIEAPPGVNVLEDEEPSKPPETQKNDLMTLLHGDLNEVLGFKTSEQAKEDAVGRIEQKGGILNSRDVNERTGNGSTTGFVRDERKMDEPLCPFKRAREAAMMFCQAHNKRPRAQAFIEATTNNGGRKRRRTANEMNAS------KGRLSATAVKIMKKMGFKERLGAREDGRAVPLEATRTQGRSGLGAMPMQVVSRDNHLLSESEMAYDLKTVRYAWDPRRGSRAIAIDPGPVSKDKLHASLQVRADSKSQSMSGNGRSDRANAEVIDVDMEQVEATTAKGNPSSKTKLTQKELDPQDEMETEIEDNFVDNKRRAMIIDMDSIVKHSTKRRMKAFGDMWNRSECFQGRRANLNDVLAHVEHDFTDVEGIKMIMRKTDISITNEKVCELLKTLDECYERLGPVEPSNNFQIAEVREILPCGILHRGSQTRLKRELRELSIHGDEFICSLYKSNDTWPYLETWKDMFCQLGVSPRQGGIIVSQDSKTVSGEVAANVLGAYAVKCTALPLQGSKPSDKTVSENMSKAADRVIQYLRTSKPGYATRRRRVLFFSRQTSMWHAGAVEFENEKMVLIRYCGSERTEWAEKDALLGLCRADYRKLKNINFEGLLEPEDI 941          
BLAST of Gchil9213.t1 vs. uniprot
Match: R7QAR8_CHOCR (G-patch domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAR8_CHOCR)

HSP 1 Score: 230 bits (586), Expect = 1.510e-59
Identity = 234/884 (26.47%), Postives = 387/884 (43.78%), Query Frame = 0
Query:   91 AFKSLPRPSEVVQEIEAGSAPEAGLPLKLKEVHYRRVKATTLKMQNLTTHGKAQPVPSWSRINRGLRAYSSYLQPPMEDRHLKLLRVPKQLLPSYYRGTLLKVYKIGDHRPEKRPRTSNASQ-------------SSDPAQSMVDFMYWATTSGESTDAKKQAPLASLEFIAEPHEQQDADRQPSKTGIIGDETDHSAPLLATAVEIEARRSEAGVMLSKVKENFQKRAYVQQIKNLAQTDDDSLSSEADSSSVALSPLPVDITSNSEGNAQEKRQEDSEKNQDEELLRLLQGHLDEELNASPKPGDDDEKEKDLCILQDVGKNNQDNKTNGVSMSVELQKPSSSFEKEREVAMEFCQASHKRPRAQAFVDATLLLASDARRKTGATRTSEAKEPTKKPIKERYAMKVLKKMGFNGRLGAREDGRSAPLEATNNVARSGLGAQPTEVVSHARNLLSEYELSESQSRDRPKMD--LNPVDIDPEPEEVERHPLFPCAPPSHVFPNTTYGEIEKEAPGIRSPEKANPSTQRDDDEKDLEDEWETEVEDKVLDNPRRALIVDMDVIIKDSHVRRKKAVKSMLTISKEFSDDKVDLDDVYTKVGHDLTDKDIVMNLLGHYQIAFSKEKLKTVLEQLDVCYERLGPCELVANFWSCRIEETF-------SCALLHRGSQNRMEREVKDLGLHESAFLFF-----TLQSCEGWPYTQIWKDVFCQLGVPPRQGGI-VSLQ---TAKILSGRVAAAVLGARVETCSRTPNEDGCCLNSS-------SASAHETLKRMVEHLQSTNLAALPRRLRVLFLSEGDNMWYAGCVQFEHE-------SKALVCSYNSGRLVWVDKDAFVALSRANYRKLRGIDFGGLLEPEDVEYL 929
            AF++LPRPS+VV +++AGSA +AG    LKE H RRVK+T + +Q L   G   PVP W+    GL+ Y+ Y+ PP ED++++  RV    L   YRG+LL+ YK+G  R  +     N S+             SSDP  S+ D+ YWATT    TD++ +A                                 S PL+     +++  S+ G      K N   +  +Q++  LA+   DS  +E   SS +  P P    +  E   +  RQE+   +  E L ++++ + +    A   P     +E+ + I ++    ++    +   + ++     S F+KER+ A EFC AS    R+       +L    +         ++A   T        ++++++KMGF GRLGA+EDG   P++      R GLG +    V   +         + ++   P +D   +PV  D   + + +    P      +  N  +  ++ +        K     +    EK   D+         +DN RRA+++DMD ++++S  RR +A + ++   +  ++D  DL     +   DL+D D +  L+    +  S   +  + + LD  Y      E     W+  +  T        S  LLHRGS+ RM RE+  LG   +A  F      T+++ + WPY   W+D+ C++GV  +Q  + V +Q   +   L G VA++VLGAR    S   +     L          SA      +R+   +         +R  VL L   D +WYAG  +F            +L+  +  G+  WV  D  + LS+ +Y K+R   F G+L+P DVE L
Sbjct:  105 AFRNLPRPSQVVPDLDAGSASDAGFGKDLKESHRRRVKSTEIIIQYLNRDGTQDPVPPWAHDINGLKRYTRYMFPPPEDQNIEAPRVLPAFLSKSYRGSLLRTYKVGA-RSRRTKNKGNPSKGITNFHDDLPCATSSDPG-SVADYEYWATT----TDSELEAL--------------------------------SPPLIQQTKVLQSANSDLG------KSN---KELLQEV--LAEHASDSSKTENSDSSTSSVP-PASSQTPPEPVEELPRQEEGADHLSE-LFKMVEENPNTLFGAQTVP-----EEESIDIRREEKSTSEKENRSKKQVRIDHDSNLSPFDKERKKAEEFCNASVVGTRSINIQQVEILKMQTSVTGAKPVELADANMKTNGYDASSKSLRMMQKMGFKGRLGAKEDGILEPIKPRTTDGRLGLGLRSERDVQMGKPAAVFPSKFKGKNAHAPVVDPDKSPVIADDFAKPLAKRKSGPAG----LTENAPHSIVDLDGSNHNKRLKRGAVLEV---EKYASDQ-------SYVDNGRRAVLIDMDALMRNSLERRLQAFRKLVESVEVLAND-FDLSGFLEQQEQDLSDNDYIARLIKAAGLGPSDSLMTRLHDDLDAAYRSGSDPE-----WNGEVLRTLKQYCKTVSYGLLHRGSRGRMNREMTSLG---TAHQFLNRSRVTVKNEDEWPYIMTWQDLLCRIGVRAQQAVLLVRVQQWTSQTCLGGVVASSVLGARSLLLSEADSSVSMELFECNPRCEIISAEVGRNHERLFAQICEKEGGMFTKR-NVLALYSSDGLWYAGREEFGGTHGVGKACESSLIAFFGYGKREWVQNDCVLELSKEHYHKMRDARFAGILDPADVEDL 908          
The following BLAST results are available for this feature:
BLAST of Gchil9213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2Z9_9FLOR2.260e-21442.62G-patch domain-containing protein n=1 Tax=Gracilar... [more]
R7QAR8_CHOCR1.510e-5926.47G-patch domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 476..520
e-value: 0.0045
score: 26.2
IPR000467G-patch domainPFAMPF01585G-patchcoord: 480..519
e-value: 6.0E-5
score: 22.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2585866..2588655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9213.t1Gchil9213.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2585866..2588655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=930bp
MNHLTTTVPTSPYEASDSDPPPVLQRLAQSRKARKRHRASSAVIIARNLR
WSKRQEKSLLQAPMQPTLSEDEEDQDPVLPTLRRTKKNLAAFKSLPRPSE
VVQEIEAGSAPEAGLPLKLKEVHYRRVKATTLKMQNLTTHGKAQPVPSWS
RINRGLRAYSSYLQPPMEDRHLKLLRVPKQLLPSYYRGTLLKVYKIGDHR
PEKRPRTSNASQSSDPAQSMVDFMYWATTSGESTDAKKQAPLASLEFIAE
PHEQQDADRQPSKTGIIGDETDHSAPLLATAVEIEARRSEAGVMLSKVKE
NFQKRAYVQQIKNLAQTDDDSLSSEADSSSVALSPLPVDITSNSEGNAQE
KRQEDSEKNQDEELLRLLQGHLDEELNASPKPGDDDEKEKDLCILQDVGK
NNQDNKTNGVSMSVELQKPSSSFEKEREVAMEFCQASHKRPRAQAFVDAT
LLLASDARRKTGATRTSEAKEPTKKPIKERYAMKVLKKMGFNGRLGARED
GRSAPLEATNNVARSGLGAQPTEVVSHARNLLSEYELSESQSRDRPKMDL
NPVDIDPEPEEVERHPLFPCAPPSHVFPNTTYGEIEKEAPGIRSPEKANP
STQRDDDEKDLEDEWETEVEDKVLDNPRRALIVDMDVIIKDSHVRRKKAV
KSMLTISKEFSDDKVDLDDVYTKVGHDLTDKDIVMNLLGHYQIAFSKEKL
KTVLEQLDVCYERLGPCELVANFWSCRIEETFSCALLHRGSQNRMEREVK
DLGLHESAFLFFTLQSCEGWPYTQIWKDVFCQLGVPPRQGGIVSLQTAKI
LSGRVAAAVLGARVETCSRTPNEDGCCLNSSSASAHETLKRMVEHLQSTN
LAALPRRLRVLFLSEGDNMWYAGCVQFEHESKALVCSYNSGRLVWVDKDA
FVALSRANYRKLRGIDFGGLLEPEDVEYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom