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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=930bp MNHLTTTVPTSPYEASDSDPPPVLQRLAQSRKARKRHRASSAVIIARNLR WSKRQEKSLLQAPMQPTLSEDEEDQDPVLPTLRRTKKNLAAFKSLPRPSE VVQEIEAGSAPEAGLPLKLKEVHYRRVKATTLKMQNLTTHGKAQPVPSWS RINRGLRAYSSYLQPPMEDRHLKLLRVPKQLLPSYYRGTLLKVYKIGDHR PEKRPRTSNASQSSDPAQSMVDFMYWATTSGESTDAKKQAPLASLEFIAE PHEQQDADRQPSKTGIIGDETDHSAPLLATAVEIEARRSEAGVMLSKVKE NFQKRAYVQQIKNLAQTDDDSLSSEADSSSVALSPLPVDITSNSEGNAQE KRQEDSEKNQDEELLRLLQGHLDEELNASPKPGDDDEKEKDLCILQDVGK NNQDNKTNGVSMSVELQKPSSSFEKEREVAMEFCQASHKRPRAQAFVDAT LLLASDARRKTGATRTSEAKEPTKKPIKERYAMKVLKKMGFNGRLGARED GRSAPLEATNNVARSGLGAQPTEVVSHARNLLSEYELSESQSRDRPKMDL NPVDIDPEPEEVERHPLFPCAPPSHVFPNTTYGEIEKEAPGIRSPEKANP STQRDDDEKDLEDEWETEVEDKVLDNPRRALIVDMDVIIKDSHVRRKKAV KSMLTISKEFSDDKVDLDDVYTKVGHDLTDKDIVMNLLGHYQIAFSKEKL KTVLEQLDVCYERLGPCELVANFWSCRIEETFSCALLHRGSQNRMEREVK DLGLHESAFLFFTLQSCEGWPYTQIWKDVFCQLGVPPRQGGIVSLQTAKI LSGRVAAAVLGARVETCSRTPNEDGCCLNSSSASAHETLKRMVEHLQSTN LAALPRRLRVLFLSEGDNMWYAGCVQFEHESKALVCSYNSGRLVWVDKDA FVALSRANYRKLRGIDFGGLLEPEDVEYL* back to topspliced messenger RNA >Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2790bp|location=Sequence derived from alignment at tig00004370_pilon:2585866..2588655+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACCACCTGACCACAACTGTTCCGACCTCTCCCTACGAGGCCTCGGA CAGTGATCCTCCGCCTGTTCTTCAGCGTCTTGCGCAATCTCGAAAAGCCC GAAAGCGCCATCGAGCTTCCAGTGCTGTCATCATTGCGCGCAACCTCCGC TGGAGCAAGCGACAGGAGAAAAGCCTTCTTCAGGCCCCTATGCAACCAAC GCTCTCAGAGGATGAAGAGGACCAAGATCCAGTTCTACCAACGCTTCGTC GCACAAAGAAGAATCTCGCTGCGTTCAAATCGCTGCCTCGTCCCTCGGAA GTCGTGCAAGAAATCGAAGCGGGCAGTGCGCCAGAGGCTGGTCTACCTTT AAAACTCAAGGAGGTCCACTACCGACGCGTCAAGGCTACCACCTTGAAGA TGCAGAACCTCACTACGCATGGTAAAGCCCAGCCCGTTCCGTCATGGTCA CGTATTAATCGCGGCCTCAGAGCTTACTCGTCATACCTGCAACCACCTAT GGAGGATCGTCATCTTAAACTTTTGCGAGTCCCAAAACAGCTCCTACCCA GTTACTACCGGGGAACTCTCTTAAAAGTATACAAGATTGGTGACCATCGC CCAGAAAAAAGACCCCGCACTAGTAATGCATCCCAATCTTCCGATCCAGC GCAATCCATGGTCGATTTTATGTATTGGGCCACCACGTCGGGCGAGAGCA CTGATGCCAAGAAGCAAGCCCCATTAGCATCTCTCGAGTTCATTGCAGAA CCGCACGAACAGCAAGACGCTGATCGTCAGCCGTCGAAGACGGGCATCAT TGGCGACGAGACTGATCATTCCGCACCACTACTCGCGACAGCGGTTGAAA TTGAAGCAAGGCGATCGGAGGCGGGAGTAATGCTTTCCAAAGTCAAAGAG AATTTCCAAAAGCGTGCTTATGTGCAGCAGATTAAGAACCTAGCTCAAAC AGATGATGACTCACTGTCGTCTGAAGCGGATTCTAGTTCAGTAGCGCTAT CGCCCCTTCCTGTGGATATCACCAGCAATTCTGAAGGGAATGCGCAAGAA AAGAGACAAGAGGACTCTGAGAAGAACCAGGATGAGGAGCTCTTGCGATT ACTTCAAGGACACCTTGATGAAGAGTTAAATGCTTCGCCAAAGCCTGGAG ATGATGATGAAAAAGAGAAAGACCTATGTATCCTTCAAGATGTTGGAAAG AACAACCAAGACAACAAGACCAACGGCGTGTCAATGTCAGTCGAACTTCA AAAACCGTCTTCCTCGTTTGAGAAGGAAAGAGAGGTCGCTATGGAGTTCT GCCAAGCATCGCACAAGCGACCCCGTGCCCAGGCTTTTGTGGATGCCACT TTGCTTCTTGCGTCTGATGCGCGCCGAAAGACTGGTGCCACGAGAACTTC TGAAGCCAAGGAACCTACCAAAAAACCTATTAAAGAGCGCTACGCAATGA AAGTACTGAAGAAAATGGGATTCAATGGACGTCTTGGCGCGCGAGAAGAC GGTCGCTCTGCTCCGTTGGAGGCTACCAATAACGTCGCTCGTTCGGGGCT TGGAGCGCAACCTACAGAAGTAGTATCTCACGCAAGAAACCTACTTTCAG AGTATGAGCTGAGCGAAAGTCAAAGCCGTGATCGTCCAAAGATGGATCTG AATCCGGTAGACATCGATCCTGAGCCTGAAGAAGTTGAAAGACACCCGCT TTTTCCATGCGCCCCTCCTAGCCATGTCTTCCCTAATACAACGTACGGTG AAATAGAAAAAGAAGCCCCAGGGATACGTTCTCCCGAAAAAGCAAACCCC AGTACCCAGCGTGACGATGATGAAAAAGACCTAGAAGATGAGTGGGAGAC TGAAGTTGAGGACAAGGTGCTCGACAACCCGAGGCGAGCCCTTATCGTTG ATATGGATGTAATCATAAAGGACAGTCATGTGAGACGAAAGAAGGCGGTT AAGTCCATGCTCACAATCTCAAAAGAGTTCTCTGATGACAAAGTCGATTT GGATGATGTGTATACAAAAGTTGGTCATGATCTCACCGACAAGGACATTG TGATGAACCTCTTAGGCCACTACCAGATCGCATTCTCAAAGGAAAAATTG AAAACAGTTTTGGAACAACTCGACGTGTGTTATGAAAGGTTGGGTCCATG CGAATTGGTAGCAAACTTTTGGAGTTGCAGAATTGAAGAAACCTTTTCTT GTGCCCTGCTGCACCGTGGTAGTCAGAATCGTATGGAACGCGAAGTGAAA GACCTCGGTCTTCATGAATCGGCTTTCTTGTTCTTCACCCTCCAGTCTTG TGAGGGGTGGCCGTATACGCAAATATGGAAGGACGTTTTTTGCCAGCTTG GGGTTCCTCCGAGACAAGGAGGCATTGTCTCGTTGCAAACTGCTAAAATA CTTTCAGGTAGAGTTGCTGCTGCTGTGCTGGGCGCTCGAGTCGAGACATG TTCACGTACACCAAACGAAGACGGATGTTGCCTGAACAGTTCATCTGCAT CAGCACATGAGACGCTAAAGCGTATGGTCGAACATTTGCAAAGTACGAAT CTCGCGGCTCTGCCGCGACGGCTTAGAGTGCTTTTCCTTTCTGAGGGAGA CAACATGTGGTACGCTGGCTGCGTTCAATTCGAGCATGAAAGTAAAGCCC TCGTCTGCAGCTATAATTCTGGTAGATTGGTTTGGGTGGACAAAGATGCC TTTGTTGCACTGAGCCGTGCAAATTATAGGAAGCTCAGGGGGATTGACTT TGGGGGACTGCTAGAGCCGGAAGATGTTGAATATTTGTAG back to topprotein sequence of Gchil9213.t1 >Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=930bp
MNHLTTTVPTSPYEASDSDPPPVLQRLAQSRKARKRHRASSAVIIARNLR WSKRQEKSLLQAPMQPTLSEDEEDQDPVLPTLRRTKKNLAAFKSLPRPSE VVQEIEAGSAPEAGLPLKLKEVHYRRVKATTLKMQNLTTHGKAQPVPSWS RINRGLRAYSSYLQPPMEDRHLKLLRVPKQLLPSYYRGTLLKVYKIGDHR PEKRPRTSNASQSSDPAQSMVDFMYWATTSGESTDAKKQAPLASLEFIAE PHEQQDADRQPSKTGIIGDETDHSAPLLATAVEIEARRSEAGVMLSKVKE NFQKRAYVQQIKNLAQTDDDSLSSEADSSSVALSPLPVDITSNSEGNAQE KRQEDSEKNQDEELLRLLQGHLDEELNASPKPGDDDEKEKDLCILQDVGK NNQDNKTNGVSMSVELQKPSSSFEKEREVAMEFCQASHKRPRAQAFVDAT LLLASDARRKTGATRTSEAKEPTKKPIKERYAMKVLKKMGFNGRLGARED GRSAPLEATNNVARSGLGAQPTEVVSHARNLLSEYELSESQSRDRPKMDL NPVDIDPEPEEVERHPLFPCAPPSHVFPNTTYGEIEKEAPGIRSPEKANP STQRDDDEKDLEDEWETEVEDKVLDNPRRALIVDMDVIIKDSHVRRKKAV KSMLTISKEFSDDKVDLDDVYTKVGHDLTDKDIVMNLLGHYQIAFSKEKL KTVLEQLDVCYERLGPCELVANFWSCRIEETFSCALLHRGSQNRMEREVK DLGLHESAFLFFTLQSCEGWPYTQIWKDVFCQLGVPPRQGGIVSLQTAKI LSGRVAAAVLGARVETCSRTPNEDGCCLNSSSASAHETLKRMVEHLQSTN LAALPRRLRVLFLSEGDNMWYAGCVQFEHESKALVCSYNSGRLVWVDKDA FVALSRANYRKLRGIDFGGLLEPEDVEYL* back to topmRNA from alignment at tig00004370_pilon:2585866..2588655+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2790bp|location=Sequence derived from alignment at tig00004370_pilon:2585866..2588655+ (Gracilaria chilensis NLEC103_M9 male) ATGAACCACCTGACCACAACTGTTCCGACCTCTCCCTACGAGGCCTCGGA
CAGTGATCCTCCGCCTGTTCTTCAGCGTCTTGCGCAATCTCGAAAAGCCC
GAAAGCGCCATCGAGCTTCCAGTGCTGTCATCATTGCGCGCAACCTCCGC
TGGAGCAAGCGACAGGAGAAAAGCCTTCTTCAGGCCCCTATGCAACCAAC
GCTCTCAGAGGATGAAGAGGACCAAGATCCAGTTCTACCAACGCTTCGTC
GCACAAAGAAGAATCTCGCTGCGTTCAAATCGCTGCCTCGTCCCTCGGAA
GTCGTGCAAGAAATCGAAGCGGGCAGTGCGCCAGAGGCTGGTCTACCTTT
AAAACTCAAGGAGGTCCACTACCGACGCGTCAAGGCTACCACCTTGAAGA
TGCAGAACCTCACTACGCATGGTAAAGCCCAGCCCGTTCCGTCATGGTCA
CGTATTAATCGCGGCCTCAGAGCTTACTCGTCATACCTGCAACCACCTAT
GGAGGATCGTCATCTTAAACTTTTGCGAGTCCCAAAACAGCTCCTACCCA
GTTACTACCGGGGAACTCTCTTAAAAGTATACAAGATTGGTGACCATCGC
CCAGAAAAAAGACCCCGCACTAGTAATGCATCCCAATCTTCCGATCCAGC
GCAATCCATGGTCGATTTTATGTATTGGGCCACCACGTCGGGCGAGAGCA
CTGATGCCAAGAAGCAAGCCCCATTAGCATCTCTCGAGTTCATTGCAGAA
CCGCACGAACAGCAAGACGCTGATCGTCAGCCGTCGAAGACGGGCATCAT
TGGCGACGAGACTGATCATTCCGCACCACTACTCGCGACAGCGGTTGAAA
TTGAAGCAAGGCGATCGGAGGCGGGAGTAATGCTTTCCAAAGTCAAAGAG
AATTTCCAAAAGCGTGCTTATGTGCAGCAGATTAAGAACCTAGCTCAAAC
AGATGATGACTCACTGTCGTCTGAAGCGGATTCTAGTTCAGTAGCGCTAT
CGCCCCTTCCTGTGGATATCACCAGCAATTCTGAAGGGAATGCGCAAGAA
AAGAGACAAGAGGACTCTGAGAAGAACCAGGATGAGGAGCTCTTGCGATT
ACTTCAAGGACACCTTGATGAAGAGTTAAATGCTTCGCCAAAGCCTGGAG
ATGATGATGAAAAAGAGAAAGACCTATGTATCCTTCAAGATGTTGGAAAG
AACAACCAAGACAACAAGACCAACGGCGTGTCAATGTCAGTCGAACTTCA
AAAACCGTCTTCCTCGTTTGAGAAGGAAAGAGAGGTCGCTATGGAGTTCT
GCCAAGCATCGCACAAGCGACCCCGTGCCCAGGCTTTTGTGGATGCCACT
TTGCTTCTTGCGTCTGATGCGCGCCGAAAGACTGGTGCCACGAGAACTTC
TGAAGCCAAGGAACCTACCAAAAAACCTATTAAAGAGCGCTACGCAATGA
AAGTACTGAAGAAAATGGGATTCAATGGACGTCTTGGCGCGCGAGAAGAC
GGTCGCTCTGCTCCGTTGGAGGCTACCAATAACGTCGCTCGTTCGGGGCT
TGGAGCGCAACCTACAGAAGTAGTATCTCACGCAAGAAACCTACTTTCAG
AGTATGAGCTGAGCGAAAGTCAAAGCCGTGATCGTCCAAAGATGGATCTG
AATCCGGTAGACATCGATCCTGAGCCTGAAGAAGTTGAAAGACACCCGCT
TTTTCCATGCGCCCCTCCTAGCCATGTCTTCCCTAATACAACGTACGGTG
AAATAGAAAAAGAAGCCCCAGGGATACGTTCTCCCGAAAAAGCAAACCCC
AGTACCCAGCGTGACGATGATGAAAAAGACCTAGAAGATGAGTGGGAGAC
TGAAGTTGAGGACAAGGTGCTCGACAACCCGAGGCGAGCCCTTATCGTTG
ATATGGATGTAATCATAAAGGACAGTCATGTGAGACGAAAGAAGGCGGTT
AAGTCCATGCTCACAATCTCAAAAGAGTTCTCTGATGACAAAGTCGATTT
GGATGATGTGTATACAAAAGTTGGTCATGATCTCACCGACAAGGACATTG
TGATGAACCTCTTAGGCCACTACCAGATCGCATTCTCAAAGGAAAAATTG
AAAACAGTTTTGGAACAACTCGACGTGTGTTATGAAAGGTTGGGTCCATG
CGAATTGGTAGCAAACTTTTGGAGTTGCAGAATTGAAGAAACCTTTTCTT
GTGCCCTGCTGCACCGTGGTAGTCAGAATCGTATGGAACGCGAAGTGAAA
GACCTCGGTCTTCATGAATCGGCTTTCTTGTTCTTCACCCTCCAGTCTTG
TGAGGGGTGGCCGTATACGCAAATATGGAAGGACGTTTTTTGCCAGCTTG
GGGTTCCTCCGAGACAAGGAGGCATTGTCTCGTTGCAAACTGCTAAAATA
CTTTCAGGTAGAGTTGCTGCTGCTGTGCTGGGCGCTCGAGTCGAGACATG
TTCACGTACACCAAACGAAGACGGATGTTGCCTGAACAGTTCATCTGCAT
CAGCACATGAGACGCTAAAGCGTATGGTCGAACATTTGCAAAGTACGAAT
CTCGCGGCTCTGCCGCGACGGCTTAGAGTGCTTTTCCTTTCTGAGGGAGA
CAACATGTGGTACGCTGGCTGCGTTCAATTCGAGCATGAAAGTAAAGCCC
TCGTCTGCAGCTATAATTCTGGTAGATTGGTTTGGGTGGACAAAGATGCC
TTTGTTGCACTGAGCCGTGCAAATTATAGGAAGCTCAGGGGGATTGACTT
TGGGGGACTGCTAGAGCCGGAAGATGTTGAATATTTGTAG back to topCoding sequence (CDS) from alignment at tig00004370_pilon:2585866..2588655+ >Gchil9213.t1 ID=Gchil9213.t1|Name=Gchil9213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2790bp|location=Sequence derived from alignment at tig00004370_pilon:2585866..2588655+ (Gracilaria chilensis NLEC103_M9 male) ATGAACCACCTGACCACAACTGTTCCGACCTCTCCCTACGAGGCCTCGGA CAGTGATCCTCCGCCTGTTCTTCAGCGTCTTGCGCAATCTCGAAAAGCCC GAAAGCGCCATCGAGCTTCCAGTGCTGTCATCATTGCGCGCAACCTCCGC TGGAGCAAGCGACAGGAGAAAAGCCTTCTTCAGGCCCCTATGCAACCAAC GCTCTCAGAGGATGAAGAGGACCAAGATCCAGTTCTACCAACGCTTCGTC GCACAAAGAAGAATCTCGCTGCGTTCAAATCGCTGCCTCGTCCCTCGGAA GTCGTGCAAGAAATCGAAGCGGGCAGTGCGCCAGAGGCTGGTCTACCTTT AAAACTCAAGGAGGTCCACTACCGACGCGTCAAGGCTACCACCTTGAAGA TGCAGAACCTCACTACGCATGGTAAAGCCCAGCCCGTTCCGTCATGGTCA CGTATTAATCGCGGCCTCAGAGCTTACTCGTCATACCTGCAACCACCTAT GGAGGATCGTCATCTTAAACTTTTGCGAGTCCCAAAACAGCTCCTACCCA GTTACTACCGGGGAACTCTCTTAAAAGTATACAAGATTGGTGACCATCGC CCAGAAAAAAGACCCCGCACTAGTAATGCATCCCAATCTTCCGATCCAGC GCAATCCATGGTCGATTTTATGTATTGGGCCACCACGTCGGGCGAGAGCA CTGATGCCAAGAAGCAAGCCCCATTAGCATCTCTCGAGTTCATTGCAGAA CCGCACGAACAGCAAGACGCTGATCGTCAGCCGTCGAAGACGGGCATCAT TGGCGACGAGACTGATCATTCCGCACCACTACTCGCGACAGCGGTTGAAA TTGAAGCAAGGCGATCGGAGGCGGGAGTAATGCTTTCCAAAGTCAAAGAG AATTTCCAAAAGCGTGCTTATGTGCAGCAGATTAAGAACCTAGCTCAAAC AGATGATGACTCACTGTCGTCTGAAGCGGATTCTAGTTCAGTAGCGCTAT CGCCCCTTCCTGTGGATATCACCAGCAATTCTGAAGGGAATGCGCAAGAA AAGAGACAAGAGGACTCTGAGAAGAACCAGGATGAGGAGCTCTTGCGATT ACTTCAAGGACACCTTGATGAAGAGTTAAATGCTTCGCCAAAGCCTGGAG ATGATGATGAAAAAGAGAAAGACCTATGTATCCTTCAAGATGTTGGAAAG AACAACCAAGACAACAAGACCAACGGCGTGTCAATGTCAGTCGAACTTCA AAAACCGTCTTCCTCGTTTGAGAAGGAAAGAGAGGTCGCTATGGAGTTCT GCCAAGCATCGCACAAGCGACCCCGTGCCCAGGCTTTTGTGGATGCCACT TTGCTTCTTGCGTCTGATGCGCGCCGAAAGACTGGTGCCACGAGAACTTC TGAAGCCAAGGAACCTACCAAAAAACCTATTAAAGAGCGCTACGCAATGA AAGTACTGAAGAAAATGGGATTCAATGGACGTCTTGGCGCGCGAGAAGAC GGTCGCTCTGCTCCGTTGGAGGCTACCAATAACGTCGCTCGTTCGGGGCT TGGAGCGCAACCTACAGAAGTAGTATCTCACGCAAGAAACCTACTTTCAG AGTATGAGCTGAGCGAAAGTCAAAGCCGTGATCGTCCAAAGATGGATCTG AATCCGGTAGACATCGATCCTGAGCCTGAAGAAGTTGAAAGACACCCGCT TTTTCCATGCGCCCCTCCTAGCCATGTCTTCCCTAATACAACGTACGGTG AAATAGAAAAAGAAGCCCCAGGGATACGTTCTCCCGAAAAAGCAAACCCC AGTACCCAGCGTGACGATGATGAAAAAGACCTAGAAGATGAGTGGGAGAC TGAAGTTGAGGACAAGGTGCTCGACAACCCGAGGCGAGCCCTTATCGTTG ATATGGATGTAATCATAAAGGACAGTCATGTGAGACGAAAGAAGGCGGTT AAGTCCATGCTCACAATCTCAAAAGAGTTCTCTGATGACAAAGTCGATTT GGATGATGTGTATACAAAAGTTGGTCATGATCTCACCGACAAGGACATTG TGATGAACCTCTTAGGCCACTACCAGATCGCATTCTCAAAGGAAAAATTG AAAACAGTTTTGGAACAACTCGACGTGTGTTATGAAAGGTTGGGTCCATG CGAATTGGTAGCAAACTTTTGGAGTTGCAGAATTGAAGAAACCTTTTCTT GTGCCCTGCTGCACCGTGGTAGTCAGAATCGTATGGAACGCGAAGTGAAA GACCTCGGTCTTCATGAATCGGCTTTCTTGTTCTTCACCCTCCAGTCTTG TGAGGGGTGGCCGTATACGCAAATATGGAAGGACGTTTTTTGCCAGCTTG GGGTTCCTCCGAGACAAGGAGGCATTGTCTCGTTGCAAACTGCTAAAATA CTTTCAGGTAGAGTTGCTGCTGCTGTGCTGGGCGCTCGAGTCGAGACATG TTCACGTACACCAAACGAAGACGGATGTTGCCTGAACAGTTCATCTGCAT CAGCACATGAGACGCTAAAGCGTATGGTCGAACATTTGCAAAGTACGAAT CTCGCGGCTCTGCCGCGACGGCTTAGAGTGCTTTTCCTTTCTGAGGGAGA CAACATGTGGTACGCTGGCTGCGTTCAATTCGAGCATGAAAGTAAAGCCC TCGTCTGCAGCTATAATTCTGGTAGATTGGTTTGGGTGGACAAAGATGCC TTTGTTGCACTGAGCCGTGCAAATTATAGGAAGCTCAGGGGGATTGACTT TGGGGGACTGCTAGAGCCGGAAGATGTTGAATATTTGTAG back to top
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