Gchil7528.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7528.t1
Unique NameGchil7528.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length137
Homology
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: G9I117_9CHLO (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I117_9CHLO)

HSP 1 Score: 251 bits (640), Expect = 4.850e-84
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKST+LLIRKLPFQRLVREIAQDYK+DLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: H33A_LILLO (Histone H3.3a n=17 Tax=Eukaryota TaxID=2759 RepID=H33A_LILLO)

HSP 1 Score: 251 bits (640), Expect = 4.850e-84
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKSTDLLIRKLPFQRLVREIAQDYK+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDYKADLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: A0A2V3INU8_9FLOR (Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2V3INU8_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 6.890e-84
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKFQKST+LLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: E1ZFV1_CHLVA (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1ZFV1_CHLVA)

HSP 1 Score: 249 bits (637), Expect = 1.390e-83
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKST+LLIRKLPFQRLVREIAQD+K+DLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: E1ZR66_CHLVA (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1ZR66_CHLVA)

HSP 1 Score: 249 bits (637), Expect = 1.390e-83
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKST+LLIRKLPFQRLVREIAQD+K+DLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: I3SP99_MEDTR (Histone H3 n=17 Tax=Eukaryota TaxID=2759 RepID=I3SP99_MEDTR)

HSP 1 Score: 249 bits (636), Expect = 1.980e-83
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKSTDLLIRKLPFQRLVREIAQD+K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: R7QCI8_CHOCR (Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QCI8_CHOCR)

HSP 1 Score: 249 bits (636), Expect = 1.980e-83
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP +GGVKKPHRYRPGTVALREIRKFQKST+LLIRKLPFQRLVREIAQD+KSDLRFQSSAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 248 bits (634), Expect = 3.990e-83
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR++QKSTDLLIRKLPFQRLVREIAQD+KSDLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: A0A8J5C461_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5C461_ZINOF)

HSP 1 Score: 249 bits (636), Expect = 4.430e-83
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKSTDLLIRKLPFQRLVREIAQD+K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   25 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 160
[Close]
BLAST of Gchil7528.t1 vs. uniprot
Match: B6SJQ5_MAIZE (Histone H3 n=1 Tax=Zea mays TaxID=4577 RepID=B6SJQ5_MAIZE)

HSP 1 Score: 249 bits (636), Expect = 4.580e-83
Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALREIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRK+QKSTDLLIRKLPFQRLVREIAQD+K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of Gchil7528.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G9I117_9CHLO4.850e-8496.32Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I... [more]
H33A_LILLO4.850e-8497.06Histone H3.3a n=17 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A2V3INU8_9FLOR6.890e-8496.32Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2... [more]
E1ZFV1_CHLVA1.390e-8396.32Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
E1ZR66_CHLVA1.390e-8396.32Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
I3SP99_MEDTR1.980e-8396.32Histone H3 n=17 Tax=Eukaryota TaxID=2759 RepID=I3S... [more]
R7QCI8_CHOCR1.980e-8396.32Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QC... [more]
A0A1Z5K8H0_FISSO3.990e-8395.59Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI... [more]
A0A8J5C461_ZINOF4.430e-8396.32Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
B6SJQ5_MAIZE4.580e-8396.32Histone H3 n=1 Tax=Zea mays TaxID=4577 RepID=B6SJQ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 58..75
score: 93.6
coord: 114..135
score: 94.86
coord: 34..55
score: 87.75
coord: 80..98
score: 81.92
coord: 98..114
score: 96.93
coord: 3..17
score: 97.1
coord: 17..31
score: 92.32
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
e-value: 7.7E-74
score: 261.3
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..136
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..136
e-value: 1.6E-74
score: 250.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..133
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..132
e-value: 2.0E-52
score: 177.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1771331..1772106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7528.t1Gchil7528.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1771331..1772106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7528.t1 ID=Gchil7528.t1|Name=Gchil7528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPITGGVKKPHRYRPGTVALR
EIRKFQKSTDLLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEAAEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3