Gchil7599.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7599.t1
Unique NameGchil7599.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length250
Homology
BLAST of Gchil7599.t1 vs. uniprot
Match: R7QPR9_CHOCR (Nfu_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPR9_CHOCR)

HSP 1 Score: 303 bits (777), Expect = 1.070e-101
Identity = 150/214 (70.09%), Postives = 179/214 (83.64%), Query Frame = 0
Query:   22 MFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVLAPHAHDLQKANMDALNNMQQKL 235
            MFIQTQ TPNAHAVMF+PGR VMP G GTADYP++++AA SPLARKLF++ GVRSVFFG+DFVTVTK D ++W  LRPE+F VIM+FFTA  E VI+ D  A +H DT+IT+ D E+VAMIKELLETRVKPAVA+DGGSI++R FD  TGVV LELQGACSTCSSSSITLKSGVENMLRHY+PEVK V +VL  HA D+++A+  A   +++KL
Sbjct:    1 MFIQTQATPNAHAVMFMPGREVMPGGRGTADYPSVRAAAPSPLARKLFSIDGVRSVFFGADFVTVTKDDPVDWTVLRPEIFEVIMEFFTADAESVILQDGEAPVHPDTLITEDDDEVVAMIKELLETRVKPAVAEDGGSILYRGFDTETGVVNLELQGACSTCSSSSITLKSGVENMLRHYIPEVKGVAEVLPEHADDIKRASEKAFTQVEKKL 214          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A2V3ITQ6_9FLOR (NifU-like protein 4, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ6_9FLOR)

HSP 1 Score: 289 bits (740), Expect = 9.570e-96
Identity = 159/242 (65.70%), Postives = 186/242 (76.86%), Query Frame = 0
Query:    3 RNVSRALFRARR----FAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIV--PDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVLAPHAHDLQKANMDALNNMQQKLSSS 238
            R V  A  RAR+    FA Q R MFIQTQ TPNAHAV FLPGR V+P    TA +P+L SA NSPLAR+LFAV GVRSVFFGSDFVTVTK D ++W  LRPE+FAVIMDFFT A E V++   D    L+ DT I + DSE+VAMIKELLETRVKPAVA+DGG+IVFR F++++G V+LE+QGACSTCSSSSITLK+GVENMLRHYVPEVK V QV       +++AN+ A NNMQ KL+ S
Sbjct:    4 RQVGAAFRRARQLSAPFAAQWRHMFIQTQPTPNAHAVKFLPGREVLPSTTPTAHFPSLTSARNSPLARRLFAVQGVRSVFFGSDFVTVTKTDDVDWGVLRPEIFAVIMDFFTDATEKVVLLTDDDQRQLN-DTAILEDDSEVVAMIKELLETRVKPAVAEDGGTIVFRGFEDSSGTVKLEMQGACSTCSSSSITLKNGVENMLRHYVPEVKRVEQVSNELDDPVEQANLQAFNNMQHKLNPS 244          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A6T6KZE3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6KZE3_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 1.530e-74
Identity = 121/216 (56.02%), Postives = 158/216 (73.15%), Query Frame = 0
Query:   20 RAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVLAPHAHDLQKANMDALNNMQQKL 235
            R+MFIQTQ TPNA++V  LPG  V+ + V TA++ +++ A  SPLARKL  + GV SVF   DF+TVTK  H+EWA LRPELF  IMD +++ +   ++ + A   H D  I  +DS++VAMIKELLETRVKPAVA DGG+I+FR FDE +GVV LELQGACS+CSSSS+TLK GVENML+HYVPEV+ V +V      +L   +  AL++++ KL
Sbjct:    2 RSMFIQTQSTPNANSVKLLPGEPVLGK-VATAEFNSIRDAQTSPLARKLLVIDGVNSVFLAKDFITVTKDSHVEWAVLRPELFEAIMDHYSSGEP--VLSEGALPDH-DCTIYPEDSDVVAMIKELLETRVKPAVADDGGNIIFRGFDEVSGVVDLELQGACSSCSSSSVTLKMGVENMLKHYVPEVREVREVKGEEKAELDSVSNKALSDLESKL 213          
BLAST of Gchil7599.t1 vs. uniprot
Match: UPI0010A4B5A7 (nifU-like protein 4, mitochondrial n=2 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4B5A7)

HSP 1 Score: 236 bits (603), Expect = 1.960e-74
Identity = 119/199 (59.80%), Postives = 145/199 (72.86%), Query Frame = 0
Query:   15 FAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVL 213
            F  Q R MFIQTQ TPN  ++MF PG+ VM   VG+AD+P  +SA NSPLA+ LF + G+  VFFGSDFVTVTK D   W  L+PE+FA IMDF+++     +   AAA    DT I + DSE+VAMIKELLETR++PAV  DGG I +R FDE TG+V+L++QGACS C SSS+TLKSG+ENML HYVPEVK V Q L
Sbjct:   74 FGGQRRTMFIQTQSTPNPSSLMFYPGKPVME--VGSADFPNARSAMNSPLAKALFGIDGITRVFFGSDFVTVTKSDDFSWDLLKPEIFATIMDFYSSGQPLFLDSQAAAA--KDTAIQEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDEETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEL 268          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A1S2XYU6_CICAR (nifU-like protein 4, mitochondrial n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XYU6_CICAR)

HSP 1 Score: 234 bits (598), Expect = 6.760e-74
Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 0
Query:   18 QARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVL 213
            Q R+MFIQTQ TPN  ++MF PG+ VM   VG+AD+P  +SA NSPLA+ LFA+ G+  VFFGSDFVTVTK +   W  L+PE+FA IMDF+++ +   +   A A++  DT I D DSE+VAMIKELLETR++PAV  DGG IV+  FD  TG+V+L++QGACS C SSS+TLKSG+ENML HYVPEVK V Q L
Sbjct:   61 QKRSMFIQTQATPNPGSLMFHPGKPVM--DVGSADFPNPRSAMNSPLAKSLFAIDGITRVFFGSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGEPRFLDSQAVASM--DTAIRDDDSEIVAMIKELLETRIRPAVQDDGGDIVYCGFDPDTGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEL 252          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A5P1F0L1_ASPOF (Nfu_N domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F0L1_ASPOF)

HSP 1 Score: 234 bits (598), Expect = 7.920e-74
Identity = 117/201 (58.21%), Postives = 149/201 (74.13%), Query Frame = 0
Query:   15 FAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVLAP 215
            F  Q R+MFIQTQ TPN  ++MF PG+ VM   VG+AD+P  ++A NSPLA+ LF + G+  VFFGSDFVTV+K +   W  L+PE+FA IMDF+T+     +  + AA+  +DT I + DSE+VAMIKELLETR++PAV  DGG IV+R FDE TG+V+L++QGACS C SSS+TLKSG+ENML HYVPEVK V Q   P
Sbjct:   67 FGVQRRSMFIQTQSTPNPLSLMFYPGKPVME--VGSADFPNARAAMNSPLAKALFGIDGITRVFFGSDFVTVSKSEEASWDYLKPEIFAAIMDFYTSGKPLFLDSNTAAS--SDTAIQEDDSEIVAMIKELLETRIRPAVQDDGGDIVYRGFDEDTGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQESDP 263          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A1X6NLU8_PORUM (Nfu_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLU8_PORUM)

HSP 1 Score: 232 bits (592), Expect = 1.090e-73
Identity = 124/209 (59.33%), Postives = 152/209 (72.73%), Query Frame = 0
Query:   36 MFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLH---------ADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVLAPHAHDLQKANMDALNNMQQKL 235
            MFLPGR VMP G G+A++ ++++A  SPLAR+L A+ GVRS FFG+DFVTVTK   + W  LRPE+F V+ DFF A+ E V+ P A              ADT I D DSE+VAMIKEL+ETRVKPAVA+DGG+IVF  FDE TGVV LELQGACSTCSSSS+TLK GVENMLRHYVPEVK V +V       +++ +  AL+ M++KL
Sbjct:    1 MFLPGRPVMPGGAGSAEFASMRAAGASPLARRLLALDGVRSAFFGADFVTVTKDPGVAWPVLRPEVFEVVADFF-ASGEPVLTPTADGEXXXXXXXXXXPADTAILDTDSEVVAMIKELIETRVKPAVAEDGGNIVFCGFDEATGVVALELQGACSTCSSSSVTLKHGVENMLRHYVPEVKGVEEVKGEATEAVERESDKALSAMEKKL 208          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A4P1RKY6_LUPAN (Nfu_N domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A4P1RKY6_LUPAN)

HSP 1 Score: 233 bits (595), Expect = 1.540e-73
Identity = 117/194 (60.31%), Postives = 141/194 (72.68%), Query Frame = 0
Query:   18 QARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQ 211
            Q R MFIQTQ TPN  ++MF PG       VG+AD+P  +SA NSPLA+ LFA+ GV  VFFGSDFVTVTK D   W  L+PE+FA IMDF+++   H +  D+      DT I D DSE VAMIKELLETR++PAV  DGG I +R+FD  TG+V+L++QGACS C SSS+TLKSG+ENML HYVPEVKSV Q
Sbjct:   53 QKRNMFIQTQPTPNPSSLMFYPGNGKAVMEVGSADFPNPRSAMNSPLAKSLFAIDGVTRVFFGSDFVTVTKSDDSSWEFLKPEIFAAIMDFYSSG--HPLFLDSQVAAAMDTAINDDDSETVAMIKELLETRIRPAVQDDGGDIEYRSFDSDTGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQ 244          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A834TJA5_9FABA (NifU-like protein 4, mitochondrial n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TJA5_9FABA)

HSP 1 Score: 234 bits (597), Expect = 1.590e-73
Identity = 118/197 (59.90%), Postives = 144/197 (73.10%), Query Frame = 0
Query:   15 FAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQ 211
            F  Q R MFIQTQ TPN  ++MF PG+ VM   VG+AD+P  +SA NSPLA+ LF + G+  VFFG+DFVTVTK +   W  L+PE+FA IMDFF++     +  D+ AT   DT I D DSE VAMIKELLETR++PAV  DGG I +R FD+ TGVV+L++QGACS C SSS+TLKSG+ENML HYVPEVK V Q
Sbjct:   74 FGGQRRTMFIQTQSTPNPSSLMFYPGKPVME--VGSADFPNARSAMNSPLAKALFGIDGITRVFFGADFVTVTKSEDSSWDLLKPEIFAAIMDFFSSGQPLFL--DSQATAAMDTAIHDDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDQDTGVVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQ 266          
BLAST of Gchil7599.t1 vs. uniprot
Match: A0A0K9QKR9_SPIOL (Nfu_N domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QKR9_SPIOL)

HSP 1 Score: 234 bits (596), Expect = 1.980e-73
Identity = 116/199 (58.29%), Postives = 146/199 (73.37%), Query Frame = 0
Query:   15 FAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGTADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPELFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRVKPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLRHYVPEVKSVHQVL 213
            F  Q R MFIQTQ TPN  ++MF PG++VM   +G++D+P  ++A NSPLA+ LF + GV  VFFGSDFVTVTK D + W  L+PE+FA +MDF+T+     +    AA+   DT I + DSE VAMIKELLETR++PAV  DGG IV+R FD  TG+V+L++QGACS C SSS+TLKSG+ENML HYVPEVK V Q L
Sbjct:   73 FLGQRRTMFIQTQPTPNPASLMFYPGKSVME--IGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS--KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEL 267          
The following BLAST results are available for this feature:
BLAST of Gchil7599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QPR9_CHOCR1.070e-10170.09Nfu_N domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3ITQ6_9FLOR9.570e-9665.70NifU-like protein 4, mitochondrial n=1 Tax=Gracila... [more]
A0A6T6KZE3_9RHOD1.530e-7456.02Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI0010A4B5A71.960e-7459.80nifU-like protein 4, mitochondrial n=2 Tax=Prosopi... [more]
A0A1S2XYU6_CICAR6.760e-7459.69nifU-like protein 4, mitochondrial n=1 Tax=Cicer a... [more]
A0A5P1F0L1_ASPOF7.920e-7458.21Nfu_N domain-containing protein n=1 Tax=Asparagus ... [more]
A0A1X6NLU8_PORUM1.090e-7359.33Nfu_N domain-containing protein n=1 Tax=Porphyra u... [more]
A0A4P1RKY6_LUPAN1.540e-7360.31Nfu_N domain-containing protein n=2 Tax=Lupinus Ta... [more]
A0A834TJA5_9FABA1.590e-7359.90NifU-like protein 4, mitochondrial n=1 Tax=Senna t... [more]
A0A0K9QKR9_SPIOL1.980e-7358.29Nfu_N domain-containing protein n=1 Tax=Spinacia o... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014824Scaffold protein Nfu/NifU, N-terminalSMARTSM00932Nfu_N_3acoord: 24..112
e-value: 3.7E-39
score: 146.1
IPR014824Scaffold protein Nfu/NifU, N-terminalPFAMPF08712Nfu_Ncoord: 24..110
e-value: 1.1E-28
score: 99.1
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 142..209
e-value: 1.8E-25
score: 88.8
IPR035433NFU1-likePIRSFPIRSF036773HIRIP5coord: 1..242
e-value: 1.1E-79
score: 264.8
IPR036498Scaffold protein Nfu/NifU, N-terminal domain superfamilyGENE3D3.30.1370.70coord: 10..117
e-value: 2.1E-32
score: 113.2
IPR036498Scaffold protein Nfu/NifU, N-terminal domain superfamilySUPERFAMILY110836Hypothetical protein SAV1430coord: 22..111
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 136..212
e-value: 8.1E-30
score: 104.7
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 127..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..249
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 14..237
NoneNo IPR availablePANTHERPTHR11178:SF1NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIALcoord: 14..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2177195..2177944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7599.t1Gchil7599.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2177195..2177944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7599.t1 ID=Gchil7599.t1|Name=Gchil7599.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=250bp
MMRNVSRALFRARRFAPQARAMFIQTQLTPNAHAVMFLPGRTVMPQGVGT
ADYPTLKSAANSPLARKLFAVSGVRSVFFGSDFVTVTKHDHLEWATLRPE
LFAVIMDFFTAADEHVIVPDAAATLHADTVITDQDSELVAMIKELLETRV
KPAVAQDGGSIVFRAFDETTGVVQLELQGACSTCSSSSITLKSGVENMLR
HYVPEVKSVHQVLAPHAHDLQKANMDALNNMQQKLSSSSPNSPTQRSEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014824Nfu/NifU_N
IPR001075NIF_FeS_clus_asmbl_NifU_C
IPR035433NFU1-like
IPR036498Nfu/NifU_N_sf
IPR034904FSCA_dom_sf