Gchil8917.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8917.t1
Unique NameGchil8917.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length391
Homology
BLAST of Gchil8917.t1 vs. uniprot
Match: A0A2V3IJW8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW8_9FLOR)

HSP 1 Score: 512 bits (1318), Expect = 5.200e-179
Identity = 272/366 (74.32%), Postives = 317/366 (86.61%), Query Frame = 0
Query:   25 TKSSETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWKIADMLGQDRCGEVVEKFRAEKQKAQNKITELQEELNSHLKDTEALKLTVVKLQEANTGLQTEIKTERSRRDGLEIETRELRDKLHWANAVANETHKYELVAERLQSLHVVVNERTQLLKRIESMVSESHHGSAEWLGEIESLTNIIRDAERDFAGGYQNAAVQGLKRQSEELERRLREALKSKESLAVEKSTLQKSIDSLQTKMKRGASTFSFGKKDADVVYRPVPSSSNEGQTWVGTLTLCILSVCTGAVLVFLLSNWQQNKEIETPVGVDKYGFSPSSSATTPGFNRTSVSPLQYVNSANSKTPASIGSTPRRY 390
            TKSSETI IKNKL TA+GKVSDLISRLDSVSDDATRAKNEIHSTL+EVWKI DMLGQDRCG+VV+K RA +QKAQ+KI ELQEE+  HLK+TE+LKL +V+ +EA   L TEIK ERSRR+ LEIETRELRDKLHWANAV+NET KYELVAERLQ+L VVV+ERTQLL+RIE+MV ++H G + W  EIESLTNI+RDAERDFAGGY++AA+ GLKRQSE+LERRLR+A K K+SLA E+++L+KS++ LQTK+  G ST    KK+ + VY+P P S+ EGQ+WVGTLTLCILSVCTGAVLVFLLSNWQQNKE+E+P   +KYGF+PSSSATTPGF RTS SPLQ+VNS NSKTP S GSTPRRY
Sbjct:   32 TKSSETIQIKNKLATAEGKVSDLISRLDSVSDDATRAKNEIHSTLIEVWKIVDMLGQDRCGDVVDKVRAAQQKAQSKIVELQEEIRGHLKETESLKLKLVQQEEATANLNTEIKAERSRREALEIETRELRDKLHWANAVSNETQKYELVAERLQNLLVVVSERTQLLRRIETMVGDAHSGFSNWKEEIESLTNIVRDAERDFAGGYKSAAISGLKRQSEDLERRLRDAQKGKDSLADERNSLRKSLELLQTKLNSGMST---SKKNIEYVYKP-PQSTEEGQSWVGTLTLCILSVCTGAVLVFLLSNWQQNKEMESPAQ-EKYGFTPSSSATTPGFQRTSASPLQFVNSGNSKTPTSRGSTPRRY 392          
BLAST of Gchil8917.t1 vs. uniprot
Match: R7QB57_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB57_CHOCR)

HSP 1 Score: 367 bits (941), Expect = 4.430e-121
Identity = 205/367 (55.86%), Postives = 272/367 (74.11%), Query Frame = 0
Query:   27 SSETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWKIADMLGQDRCGEVVEKFRAEKQKAQNKITELQEELNSHLKDTEALKLTVVKLQEANTGLQTEIKTERSRRDGLEIETRELRDKLHWANAVANETHKYELVAERLQSLHVVVNERTQLLKRIESMVSESHHGSAEWLGEIESLTNIIRDAERDFAGGYQNAAVQGLKRQSEELERRLREALKSKESLAVEKSTLQKSIDSLQTKMKR-GASTFSFGKKDADVVYRPVPSSSNEGQTWVGTLTLCILSVCTGAVLVFLLSNWQQNKEIETPVGVDKYGFSPSS-SATTPGFNRTSVSPLQYVNSAN-SKTPASIGSTPRRY 390
            S ET+ IKNKL TA+G+V+DLISRLDSVSDDA+RAKNEIH+TL+EVW++ D+LG+DRCGEVV+K R  ++KA+NK TE +EE+  HLK  E LKL + K  ++   LQTEIK ERSRR+ LE E R+LRDKLHWA+AV+NET KYELVAERLQ L VVV ERT LL RI +MV ++H+G +EW  EI SL+ ++RDAERDF+GGYQ+AAV+GL+R + +LE RL +ALK +++L+ E++ L++SI++LQ K+   G      GK + + +       ++ G + +G +TLC++SVCTGAV VFLLS+  Q          +KYGF+P+S S T+PGF     SPLQY N  + S+TP S GSTPRRY
Sbjct:   84 SKETLTIKNKLATAEGRVTDLISRLDSVSDDASRAKNEIHTTLMEVWQVVDLLGKDRCGEVVDKVRVAQKKAENKATEQEEEIREHLKSIENLKLQLAKDGDSVNSLQTEIKAERSRREVLETEARDLRDKLHWASAVSNETEKYELVAERLQRLLVVVTERTNLLNRILTMVGDAHNGFSEWRKEISSLSTVVRDAERDFSGGYQSAAVEGLRRHTIDLENRLSQALKGRDTLSDERTVLRRSIEALQKKISSAGGIMGGTGKSERERIV----VQTDSGTSMLGVVTLCLISVCTGAVAVFLLSS--QRGSSNATQTAEKYGFTPTSASRTSPGFPSGGPSPLQYANPGSASRTPGSRGSTPRRY 444          
BLAST of Gchil8917.t1 vs. uniprot
Match: A0A5J4YKW1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKW1_PORPP)

HSP 1 Score: 103 bits (258), Expect = 7.970e-21
Identity = 86/330 (26.06%), Postives = 166/330 (50.30%), Query Frame = 0
Query:   17 TASGEQVITKSSETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWKIADMLGQDRCGEVVEKFRAEKQKAQNKITELQEELNSHLKDTEALKLTVVKLQEANTGLQTEIKTERS----RRDGLEIETRELRDKLHWANAVANETHKYELVAERLQSLHVVVNERTQLLKRIESMVSESHHGSAEWLGEIESLTNIIRDAERDFAGGYQNAAVQGL-----KRQSEELERRLREALKSKESLAVEKSTLQKSIDSLQTKMKRGASTFSFGKKDADVVYRPVPSSSNEG--------QTWVGTLTLCILSVCTGAVLVFL 329
            +++G +V++   E + ++ KL+ A+G+V +L+S L+ VS DA+RAK EIH  L E W + DML +D+CG+ VE  R ++++ ++ + E +E     ++D E +   + K + A   ++ E++ +       RD L  E +  R+K+  A+A+ N +  Y+ +  +   +  +V+ R +LL ++ +M+ +      E +G   SL   ++D + +F        +  L     ++ +  LE RL EAL  +++   E   +  S ++ Q     GA        ++ ++    PSSS  G         +W    T+    +C GAV++ L
Sbjct:   46 SSTGSKVVSNEKEAMQLRTKLEHAEGRVRELVSNLEVVSVDASRAKTEIHEMLHEAWSMVDMLSRDKCGDAVETVRIKQREIESALIESRE----MVEDRERVIAKLEKEKGAAAKVRKELEEKEDAWADERDKLMREIQLEREKVVVAHALFNASSIYQKLHPQFDEVATLVHSRFELLTKLRTMIGQLSGEHDELVGAFSSLETFVKDVDAEFKSKISGLKLSSLDQSAVQKHAAALEARLHEALVERDAAMREVRQVYDSFNAAQ-----GA--------ESHIIAPAFPSSSGSGGASGSGVSSSWSTGWTIFFTFIC-GAVMMAL 357          
The following BLAST results are available for this feature:
BLAST of Gchil8917.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJW8_9FLOR5.200e-17974.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QB57_CHOCR4.430e-12155.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YKW1_PORPP7.970e-2126.06Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..277
NoneNo IPR availableCOILSCoilCoilcoord: 88..122
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..308
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..330
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 331..390
NoneNo IPR availableTMHMMTMhelixcoord: 308..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:111707..112879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8917.t1Gchil8917.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 111707..112879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8917.t1 ID=Gchil8917.t1|Name=Gchil8917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=391bp
MTRLFAPLLLCSIVLLTASGEQVITKSSETIAIKNKLDTAQGKVSDLISR
LDSVSDDATRAKNEIHSTLVEVWKIADMLGQDRCGEVVEKFRAEKQKAQN
KITELQEELNSHLKDTEALKLTVVKLQEANTGLQTEIKTERSRRDGLEIE
TRELRDKLHWANAVANETHKYELVAERLQSLHVVVNERTQLLKRIESMVS
ESHHGSAEWLGEIESLTNIIRDAERDFAGGYQNAAVQGLKRQSEELERRL
REALKSKESLAVEKSTLQKSIDSLQTKMKRGASTFSFGKKDADVVYRPVP
SSSNEGQTWVGTLTLCILSVCTGAVLVFLLSNWQQNKEIETPVGVDKYGF
SPSSSATTPGFNRTSVSPLQYVNSANSKTPASIGSTPRRY*
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