Gchil7452.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7452.t1
Unique Name	Gchil7452.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	279

Homology

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BLAST of Gchil7452.t1 vs. uniprot
Match: A0A2V3J396_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J396_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 4.380e-58
Identity = 142/306 (46.41%), Postives = 177/306 (57.84%), Query Frame = 0

Query:    1 MPRPNKRPAADFAADCDDPLHFVQVYCKRRNIAFDTGASPVEKMCHAAASHARDEFKRIRNACRSDRSPAPDRTGLTPAQKYTIRLQNNRRSASASKVYTEILKREHAHRLVQLSMRVA------------------HLQRTLDDEKAR-------SNRLLKRL---------LQDARVSASAASQQPAP-STPLHQRFVNSRAPDSNNIPPCSLSPVALHHSETLHHSDAAHFHTGLTCSQSQDLHDKHPVSSPPPNHSLPMSPALQIPDVNSQP-TQELPPFKPLNSDELVPSLPPSDFFTTSQ 270
            MP   KRPA+    + DDPL FV +YCKRRNIAF+ G+SPVEK+C  AA+ AR+E+K  RNA  + R  APDR  L+PAQKYTIRL NNR+SASASKV++E+LKREHA  L  ++   A                   L+  L  EK R       ++ LL +L         +Q+     +  S +  P ST LHQR+VNSRA  S  I    LSPV +     L  SD   FHTGLTC+QSQD  +K    +  P  SLPMS +L +  +NSQP +Q   PFK LN+DEL   LP SDFF  SQ
Sbjct:    1 MPLRKKRPASQL--ESDDPLEFVALYCKRRNIAFEIGSSPVEKLCAKAAASAREEYKTFRNALHT-REDAPDRRALSPAQKYTIRLHNNRKSASASKVFSEVLKREHAAHLASITPSQAATLQSRDRETSNLRTTIYQLEGALKAEKRRVHTLQKHNDHLLTKLAHANFTHAPVQEVVQPPTTTSLEHVPASTALHQRYVNSRA--SPPIASWPLSPVNI----ALPDSDVKDFHTGLTCTQSQDADEK----AHAPKSSLPMSSSLPLALLNSQPASQNDIPFKSLNTDELGGPLPGSDFFNGSQ 293

The following BLAST results are available for this feature:

BLAST of Gchil7452.t1 vs. uniprot

BLAST of Gchil7452.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J396_9FLOR	4.380e-58	46.41	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..278

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000007_pilon	contig	tig00000007_pilon:1287404..1288240 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7452.t1	Gchil7452.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000007_pilon 1287404..1288240 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7452.t1 ID=Gchil7452.t1|Name=Gchil7452.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=279bp
MPRPNKRPAADFAADCDDPLHFVQVYCKRRNIAFDTGASPVEKMCHAAAS
HARDEFKRIRNACRSDRSPAPDRTGLTPAQKYTIRLQNNRRSASASKVYT
EILKREHAHRLVQLSMRVAHLQRTLDDEKARSNRLLKRLLQDARVSASAA
SQQPAPSTPLHQRFVNSRAPDSNNIPPCSLSPVALHHSETLHHSDAAHFH
TGLTCSQSQDLHDKHPVSSPPPNHSLPMSPALQIPDVNSQPTQELPPFKP
LNSDELVPSLPPSDFFTTSQPLATRTSP*