Gchil6392.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6392.t1
Unique NameGchil6392.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length159
Homology
BLAST of Gchil6392.t1 vs. uniprot
Match: A0A2R4G0U1_GRALE (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 124 bits (310), Expect = 4.380e-33
Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFRSSDGTQHHVPNYEYHREQDKVHLEVELPGVQKEHXXXXMRGVNLCITGRRFKSIGLVVEEQKDDAAQNNT--TDVEMGEGKNASMVYELQVKVGENVDEGAIKAEHRDGILKMMIPLKTETGARKIAIT 156
            +P FP S  +R++    +LAD++     + D T + VPNYEY+R++D  HL+VELPGV KEH    M   NL IT RRF+S       Q+ D +  NT   D         S VY++QVK+G NVDE  IKAE+  G+L+++IP +  T  RKI+IT
Sbjct:    9 DPFFPLSSFDRDMHSFLRLADRLGTVHSNRDRTNYQVPNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSPAQPVSQEPDQSTENTGENDANKTRSLKPSHVYKMQVKIGNNVDEEGIKAEYNHGVLELIIPQRKMT-TRKISIT 164          
BLAST of Gchil6392.t1 vs. uniprot
Match: A0A2V3IM19_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM19_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 5.530e-31
Identity = 69/158 (43.67%), Postives = 98/158 (62.03%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFRSSDGTQHHVPNYEYHREQDKVHLEVELPGVQKEHXXXXMRGVNLCITGRRFKSIGLVVEEQKDDAAQNNTT--DVEMGEGKNASMVYELQVKVGENVDEGAIKAEHRDGILKMMIPLKTETGARKIAITQ 157
            +PLFP S  +R++  L +LA+++ N   ++DGT + VPNYEY R+ D  HL+VELPGV KEH    +   NL I  RRF+        QK + +   T   D ++ +    S VY++QV+VG  VDE AIKA++  G+L M+IPLK +  AR IAIT+
Sbjct:    9 DPLFPLSSFDRDMDSLLRLANRI-NVRPNADGTTYQVPNYEYQRDNDNFHLQVELPGVAKEHIDVKINTGNLTIIARRFRPSQAESGSQKPEQSTQVTAENDADVTQSPKPSHVYKMQVEVGSTVDEDAIKADYNHGVLSMVIPLK-KISARTIAITE 164          
BLAST of Gchil6392.t1 vs. uniprot
Match: A0A2V3J651_9FLOR (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 1.160e-27
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   11 NRELRRLRQLADQMENSFRSSDGTQHHVPNYEYHREQDKVHLEVELPGVQKEHXXXXMRGVNLCITGRRFKSIGLVVEEQKDDAA--QNNTTDVEMGEGKNASMVYELQVKVGENVDEGAIKAEHRDGILKMMIPLKTETGARKIAIT 156
            +RE+R  R+ AD+ EN    ++ T +  PNYE+ R+ D ++L+VELPGV KEH    M    L IT RRFK+       ++ + A  +    D    E    S VY+L VK G NVD+  IKAE+  GIL +++P+K    ARKIA+T
Sbjct:    4 DREMRSQRRFADRSENVCLKTNRTIYKAPNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKASHSQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHVKTGTNVDDEGIKAEYNHGILNIVLPMKKVNTARKIALT 151          
BLAST of Gchil6392.t1 vs. uniprot
Match: A0A2V3J372_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J372_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 6.120e-25
Identity = 61/157 (38.85%), Postives = 84/157 (53.50%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFRSSDGTQHHVPNYEYHREQDKVHLEVELPGVQKEHXXXXMRGVNLCITGRRFKSIGLVV--EEQKDDAAQNNTTDVEMGEGKNASMVYELQVKVGENVDEGAIKAEHRDGILKMMIPLKTETGARKIAIT 156
            +P FP    + ++R L +LAD++ N++  +D T   VPNYEY R  DK+ L+VELPGV KEH    M    L IT RR +        +E                       +Y+LQV++  NVD+  IKAE+  GIL M++PLK    AR+IAIT
Sbjct:    9 DPFFPLPSFDSDMRPLLRLADRVVNAYPITDRTTIQVPNYEYQRNNDKITLQVELPGVAKEHIDVEMNSGKLTITARRLRLSHAQPSSKESXXXXXXXXXXXXXXXXXXXXXXLYKLQVRISTNVDDEGIKAEYNHGILNMILPLKKIDSARRIAIT 165          
BLAST of Gchil6392.t1 vs. uniprot
Match: A0A2V3IUF0_9FLOR (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 63.2 bits (152), Expect = 1.660e-9
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0
Query:   29 RSSDGTQHHVPNYEYHREQDKVHLEVELPGVQKEHXXXXMRGVNLCITGRRFKSIGLVV---EEQKDDAAQNNTTD-------VEMGEGK-NASMVYELQVKVGENVDEGAIKAE-HRDGILKMMIPLKTETGARKIAI 155
            R+   +Q   P+Y Y   QD   L+VELPGV KEH    ++G +L ++ RRF++  L       +  DAA+    D        E G      +  Y L++++  + D  A+K E + +GIL + IP+ + T +RKI I
Sbjct:   27 RTPSSSQTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITI 165          
The following BLAST results are available for this feature:
BLAST of Gchil6392.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2R4G0U1_GRALE4.380e-3343.31Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
A0A2V3IM19_9FLOR5.530e-3143.67Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A2V3J651_9FLOR1.160e-2741.22Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J372_9FLOR6.120e-2538.85Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A2V3IUF0_9FLOR1.660e-932.37SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 6..156
e-value: 3.8E-18
score: 67.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 25..155
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 44..155
e-value: 4.6E-10
score: 39.5
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 32..158
score: 13.580261
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 48..143
e-value: 2.35437E-11
score: 54.8677

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:616250..616726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6392.t1Gchil6392.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 616250..616726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6392.t1 ID=Gchil6392.t1|Name=Gchil6392.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=159bp
MEPLFPFSFPNRELRRLRQLADQMENSFRSSDGTQHHVPNYEYHREQDKV
HLEVELPGVQKEHIEVEMRGVNLCITGRRFKSIGLVVEEQKDDAAQNNTT
DVEMGEGKNASMVYELQVKVGENVDEGAIKAEHRDGILKMMIPLKTETGA
RKIAITQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom