Gchil6377.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6377.t1
Unique NameGchil6377.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length191
Homology
BLAST of Gchil6377.t1 vs. uniprot
Match: A0A2V3J3D3_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3D3_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 7.240e-26
Identity = 73/189 (38.62%), Postives = 107/189 (56.61%), Query Frame = 0
Query:    1 MQQGFEQFLSIVIVSCSPGAW-NTVFAASWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVRPIRENAMGTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSDEDQNNLISQHIEARREAECKSLKLKEERFDFEQRKKDR 188
            MQ  FE+ L I + +  P +W  TV A SWKT+ D +++I+ ++R AV  N V S IIEV GERETLLDD++L  DE++E+RR E DE                            +               +   +++KR + P++VDSD+++ ++IS HI ARRE E K LKL+E+RF FEQR+++R
Sbjct:  104 MQPRFEEALQIFLAAV-PDSWLATVTAPSWKTLNDRFKKIISEHRKAVNCNAVASGIIEVRGERETLLDDLILDIDEFEERRRTEHDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------------SGEESEQKRKKRPLIVDSDDEEQDMISDHIAARREIEGKRLKLEEDRFCFEQRREER 276          
BLAST of Gchil6377.t1 vs. uniprot
Match: R7Q5L6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L6_CHOCR)

HSP 1 Score: 88.6 bits (218), Expect = 2.070e-18
Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:   28 SWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVRPIRENAMGTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSDED 152
            SWKT+ D +++I+ D+R+AVK+N V   IIE+ GERE LLDD++L  DE+K++RR+ERDE+T LD RL      IR NA+   ++   +        E+ A+     + ++++ +A  V   DED
Sbjct:   89 SWKTLNDGFKKIVSDHRIAVKENVVALGIIEIQGERELLLDDIVLTVDEFKDERRSERDEKTNLDRRLRLVGETIRSNALKYVRIGSAE-------DEKEASGEEGLQKQQRKRKAAAVESDDED 206          
BLAST of Gchil6377.t1 vs. uniprot
Match: R7QCD7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCD7_CHOCR)

HSP 1 Score: 88.2 bits (217), Expect = 5.140e-18
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   28 SWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVRPIRENAM------GTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSDEDQNNLISQHIEARREAECKSLKL 174
            +WK+++D +++++ D R   K N   S IIEV GE+E LLDD++L  DE++E +R E+++R   + RL+EA R IR  A+      G+S+ +D    +  G  +     AN  R K    R  V+ DSD ++  L+ Q +EARREAE K L L
Sbjct:   17 TWKSVRDRFKKLIADRRRKNKNNLNASGIIEVRGEKEVLLDDLLLEIDEHEESKRIEKEDRNAKERRLMEAGRLIRAQALQRHTNSGSSRGLD---SAGEGAVDDEEISANAERRKNTSKRRRVLCDSDGEEKVLMIQDMEARREAEKKRLDL 166          
BLAST of Gchil6377.t1 vs. uniprot
Match: A0A2V3ICS1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICS1_9FLOR)

HSP 1 Score: 78.2 bits (191), Expect = 1.700e-15
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 MQQGFEQFLSIVIVSCSPGAWNTVFAASWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKE 79
            +Q  FE+ + I I S    A+NTVF  +WKT+ D +++IL ++R A  KN V S IIEV GERETLLDDV+L  DE+ E
Sbjct:   28 IQFRFEEAMDIFISSAPARAFNTVFTMTWKTLIDQFKKILCEHRAATNKNAVSSGIIEVQGERETLLDDVILEVDEWDE 106          
BLAST of Gchil6377.t1 vs. uniprot
Match: A0A2V3II51_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II51_9FLOR)

HSP 1 Score: 78.6 bits (192), Expect = 1.230e-14
Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    2 QQGFEQFLSIVIVSCSPGAW-NTVFAASWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTE 90
            Q  FE+ L I   +  P +W   V A SWKT+ D +++I+ ++R AV  N V S IIEV GERE LLDD++L  DE++E+RR ERDERT+
Sbjct:  105 QPRFEEALQIFCAAV-PDSWLANVTAPSWKTLNDRFKKIISEHRKAVNCNAVASGIIEVRGEREPLLDDLILEIDEFEERRRTERDERTD 193          
BLAST of Gchil6377.t1 vs. uniprot
Match: A0A2V3IK68_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK68_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 1.610e-7
Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 0
Query:    5 FEQFLSIVIVSCSPGAWNTVFAASWKTIKDPYERILGDNRLAVKKNTVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVRPIRENAMGT-SKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSDEDQNNLISQHIEAR 164
            FEQ L + + +        +     KT++D +  I+   R+ V+     S I+E  G+RE LLDDV+LA DE +E++    +ERTE + +L +A   IR  A+    K    D   + G ++   +D ++P   KK  +     DSD+D+ + I + I+ R
Sbjct:  108 FEQALKLFLDAAPSSQLVDITRPVPKTLRDRFTTIVEKRRVEVRGTAAASGIVEKRGQREELLDDVILAMDEEQERKNALINERTEKEKQLNDAGEAIRAKAVTRMQKQQREDREEDCGASD---SDKSSPVAFKKVRKRVFSTDSDDDEKDAIQEEIKLR 265          
The following BLAST results are available for this feature:
BLAST of Gchil6377.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J3D3_9FLOR7.240e-2638.62Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
R7Q5L6_CHOCR2.070e-1840.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QCD7_CHOCR5.140e-1838.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ICS1_9FLOR1.700e-1551.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II51_9FLOR1.230e-1450.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK68_9FLOR1.610e-730.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:424548..425120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1Gchil6377.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 424548..425120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=191bp
MQQGFEQFLSIVIVSCSPGAWNTVFAASWKTIKDPYERILGDNRLAVKKN
TVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVR
PIRENAMGTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSD
EDQNNLISQHIEARREAECKSLKLKEERFDFEQRKKDREV*
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