Gchil6377.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6377.t1
Unique NameGchil6377.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length191
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:424548..425120 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6377Gchil6377Gracilaria chilensis NLEC103_M9 malegenetig00000196_pilon 424548..425120 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1.stop1Gchil6377.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000196_pilon 424548..424550 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1.CDS1Gchil6377.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000196_pilon 424548..425120 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1.exon1Gchil6377.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000196_pilon 424548..425120 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1.start1Gchil6377.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000196_pilon 425118..425120 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6377.t1Gchil6377.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000196_pilon 424548..425120 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=191bp
MQQGFEQFLSIVIVSCSPGAWNTVFAASWKTIKDPYERILGDNRLAVKKN
TVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVR
PIRENAMGTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSD
EDQNNLISQHIEARREAECKSLKLKEERFDFEQRKKDREV*
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spliced messenger RNA

>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=573bp|location=Sequence derived from alignment at tig00000196_pilon:424548..425120- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCAAGGTTTTGAACAATTCCTTTCAATAGTAATCGTGTCATGTTC
GCCAGGAGCGTGGAATACCGTTTTCGCAGCGTCTTGGAAGACAATCAAAG
ACCCTTATGAGAGAATCTTGGGCGACAACCGCTTGGCTGTTAAGAAGAAT
ACCGTTTTTTCCCATATAATCGAGGTACTTGGCGAACGCGAAACATTGCT
TGACGACGTTATGCTGGCGGGCGATGAGTACAAGGAACAGCGGAGGAATG
AGAGAGATGAACGAACGGAACTAGACAACCGTCTTTTGGAAGCCGTCAGG
CCGATACGGGAGAACGCGATGGGAACCAGCAAGCTTGTGGACCTTGACTG
GCATTCGAATCATGGGAATACGGAGCGAAGGGCGAACGATGCGAACACTC
CTCGCACAAAGAAAAAAAGGCACCGTGCGCCCGTGGTGGTAGACTCGGAC
GAAGACCAGAATAATCTTATCAGCCAGCACATTGAGGCCCGGAGAGAGGC
AGAATGCAAGAGTTTGAAGCTGAAGGAGGAGCGATTCGATTTTGAGCAAC
GAAAAAAAGATCGCGAGGTATAG
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protein sequence of Gchil6377.t1

>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=191bp
MQQGFEQFLSIVIVSCSPGAWNTVFAASWKTIKDPYERILGDNRLAVKKN
TVFSHIIEVLGERETLLDDVMLAGDEYKEQRRNERDERTELDNRLLEAVR
PIRENAMGTSKLVDLDWHSNHGNTERRANDANTPRTKKKRHRAPVVVDSD
EDQNNLISQHIEARREAECKSLKLKEERFDFEQRKKDREV*
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mRNA from alignment at tig00000196_pilon:424548..425120-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=573bp|location=Sequence derived from alignment at tig00000196_pilon:424548..425120- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGCAAGGTTTTGAACAATTCCTTTCAATAGTAATCGTGTCATGTTC
GCCAGGAGCGTGGAATACCGTTTTCGCAGCGTCTTGGAAGACAATCAAAG
ACCCTTATGAGAGAATCTTGGGCGACAACCGCTTGGCTGTTAAGAAGAAT
ACCGTTTTTTCCCATATAATCGAGGTACTTGGCGAACGCGAAACATTGCT
TGACGACGTTATGCTGGCGGGCGATGAGTACAAGGAACAGCGGAGGAATG
AGAGAGATGAACGAACGGAACTAGACAACCGTCTTTTGGAAGCCGTCAGG
CCGATACGGGAGAACGCGATGGGAACCAGCAAGCTTGTGGACCTTGACTG
GCATTCGAATCATGGGAATACGGAGCGAAGGGCGAACGATGCGAACACTC
CTCGCACAAAGAAAAAAAGGCACCGTGCGCCCGTGGTGGTAGACTCGGAC
GAAGACCAGAATAATCTTATCAGCCAGCACATTGAGGCCCGGAGAGAGGC
AGAATGCAAGAGTTTGAAGCTGAAGGAGGAGCGATTCGATTTTGAGCAAC
GAAAAAAAGATCGCGAGGTATAG
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Coding sequence (CDS) from alignment at tig00000196_pilon:424548..425120-

>Gchil6377.t1 ID=Gchil6377.t1|Name=Gchil6377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=573bp|location=Sequence derived from alignment at tig00000196_pilon:424548..425120- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGCAAGGTTTTGAACAATTCCTTTCAATAGTAATCGTGTCATGTTC
GCCAGGAGCGTGGAATACCGTTTTCGCAGCGTCTTGGAAGACAATCAAAG
ACCCTTATGAGAGAATCTTGGGCGACAACCGCTTGGCTGTTAAGAAGAAT
ACCGTTTTTTCCCATATAATCGAGGTACTTGGCGAACGCGAAACATTGCT
TGACGACGTTATGCTGGCGGGCGATGAGTACAAGGAACAGCGGAGGAATG
AGAGAGATGAACGAACGGAACTAGACAACCGTCTTTTGGAAGCCGTCAGG
CCGATACGGGAGAACGCGATGGGAACCAGCAAGCTTGTGGACCTTGACTG
GCATTCGAATCATGGGAATACGGAGCGAAGGGCGAACGATGCGAACACTC
CTCGCACAAAGAAAAAAAGGCACCGTGCGCCCGTGGTGGTAGACTCGGAC
GAAGACCAGAATAATCTTATCAGCCAGCACATTGAGGCCCGGAGAGAGGC
AGAATGCAAGAGTTTGAAGCTGAAGGAGGAGCGATTCGATTTTGAGCAAC
GAAAAAAAGATCGCGAGGTATAG
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