Gchil3408.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3408.t1
Unique NameGchil3408.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length216
Homology
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A2V3J467_9FLOR (SAM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J467_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 1.650e-90
Identity = 143/201 (71.14%), Postives = 165/201 (82.09%), Query Frame = 0
Query:   15 LVASNGGGAAPNVRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTLTILALRD 215
            +VAS    AA  VRTVADV+KWL DLG+SQYA  F +NEV+G ILKTLTSEELRDDL + NLRHRR IL A  RL++E+A P AQ LPEHGRILDHLSNVRTYHSWI VGIQFL FAVVTLRL+PNFR T L+TA+S YF+L+GISAL+Y V+RYK VI MIESSGPST +++PDRVGVVS+L +A AA  L L I+ALR 
Sbjct:   26 VVASENAPAA-KVRTVADVRKWLCDLGYSQYADSFSSNEVNGSILKTLTSEELRDDLAVTNLRHRRHILDATRRLLQEDAPPTAQYLPEHGRILDHLSNVRTYHSWIRVGIQFLAFAVVTLRLAPNFRSTALVTAASFYFALVGISALLYAVFRYKRVIDMIESSGPSTHNYTPDRVGVVSMLFIALAAFTLALIIIALRH 225          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A1X6P5I1_PORUM (SAM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5I1_PORUM)

HSP 1 Score: 213 bits (541), Expect = 3.380e-65
Identity = 110/217 (50.69%), Postives = 148/217 (68.20%), Query Frame = 0
Query:    2 ETSPPRPCPLPSVLVASNGGGAAPNVRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEAS-------PDA-QKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTLTI 210
            E +PP P   P+ +           V + ADVQ WL+ LG+++Y   F  NE+ G +L+TLTS+ELRDDL + +LRHRR++L AI+ L+  +A        PD    LPEHGRILDHLSNVR+YHSW+ VG+Q LGF++VTLRL+P FR+  L+TA+S+YF+ IG+ AL+YGV+RY+ VIGMIE SG  T  + PDRVGV+++L     A V  L I
Sbjct:   99 EDTPPEPAAPPAPM--------PDKVHSSADVQSWLSALGYARYGPTFAANEITGDVLRTLTSDELRDDLGVRHLRHRRDLLDAISALLARDAELRSSPTVPDVVDALPEHGRILDHLSNVRSYHSWMRVGVQMLGFSIVTLRLTPKFRERPLVTAASLYFAAIGVGALLYGVFRYRQVIGMIERSGAKTPAYDPDRVGVLAMLFAVLTAAVFVLVI 307          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A7S2ZTG3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZTG3_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 4.670e-55
Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 0
Query:   27 VRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDT-NLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTLTILAL 213
            ++T  DV  WL +LG  +Y   F++NE++G IL +LTSEELRDDL + NL+HRRE+L AI  +   +   D   LPEHGRILDHLSNVRT+HSW+ VG+Q L FA+V+LRL P +R+  NLIT  S+Y+S +G  A++YG+ RY  V+  IE SG  T  + PD++GV  +L+L   A  LTL ++ L
Sbjct:   30 LQTSEDVANWLRELGKDEYISTFMSNEINGEILASLTSEELRDDLGVINLKHRRELLTAIKSIGGMKKGEDT--LPEHGRILDHLSNVRTFHSWVRVGVQLLAFALVSLRLFPTWRENRNLITGCSLYYSCVGAFAILYGLARYALVVKWIEESGVKTPKYHPDKIGVAVMLVLVLVATALTLYVITL 215          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A5J4YSG0_PORPP (SAM domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSG0_PORPP)

HSP 1 Score: 171 bits (434), Expect = 1.110e-49
Identity = 97/209 (46.41%), Postives = 130/209 (62.20%), Query Frame = 0
Query:    2 ETSPPRPCPLPSVLVASNGGGAAPNVRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLP-EHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTLT 209
            E+S P P      L    G   AP  ++V DV  WL   G+ +Y   F  NEVDG IL TL++EELRD+L + NL+HRR++L AI  LV++      ++ P E G IL+HLSNVRTYHSW+ +GIQ    AV TLRL+P FR   + TAS+ Y  L G+   +YG+YRY+ VI MI++S    + + PD VGV  +L+L+ AA  L LT
Sbjct:   58 ESSEPEP------LGIDAGQKGAP--QSVEDVADWLKRQGYPEYVDAFRFNEVDGAILTTLSTEELRDELHVCNLKHRRDLLAAIDLLVDQSGMVAPRETPPEDGWILNHLSNVRTYHSWLRLGIQLFSLAVATLRLTPVFRPKGITTASAFYNCLCGVGLFLYGIYRYRQVILMIDNSSQHDRFYKPDYVGVYGMLVLSLAAGALVLT 258          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A7S1XIP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIP6_9RHOD)

HSP 1 Score: 156 bits (395), Expect = 4.790e-45
Identity = 75/134 (55.97%), Postives = 96/134 (71.64%), Query Frame = 0
Query:   27 VRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGIS 160
            +    DV +WL  LG+ +Y   F TNEV+G ILKTL+SEELRDDL ++ LRHRR+IL AI  LV E        LPEHGR+LDHLSNVRTYHSW+ +GIQ L  ++ TLRL+P +RD  L+TAS++ F  +G+S
Sbjct:   35 ITNADDVAEWLRALGYPEYVEAFRTNEVNGEILKTLSSEELRDDLGVSVLRHRRDILDAINELVRESVPVQRDALPEHGRVLDHLSNVRTYHSWVRIGIQILALSIGTLRLAPVYRDKTLVTASAMTFGFMGVS 168          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A1X6PDD2_PORUM (SAM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDD2_PORUM)

HSP 1 Score: 115 bits (287), Expect = 5.040e-28
Identity = 75/195 (38.46%), Postives = 110/195 (56.41%), Query Frame = 0
Query:   25 PNVRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEAS--PDA-------QKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLS----PNFRDT--NLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVV-SILLLAFAA 203
            P + T ++V  W++DLGF +YA  FL + V GVIL++LT+E+LRD+L +  LRHRR ++ AI  L  EE +  P A         LPE GR+L H+SNVRT HSW  + +Q L  A   +RL+       +D     + A+   F    +   VYG +R+  V  +++S   ++  F PD  GV+ S L+L F A
Sbjct:   23 PALDTPSEVVAWVSDLGFPEYAPAFLDHAVSGVILRSLTTEDLRDELGVKPLRHRRALIAAIDHLNSEETAGTPHAGLVTGTFSALPEFGRMLTHMSNVRTVHSWQRLAVQQLILAAGVVRLALVELKEEKDVLYRFVLAACSAFCGACVLFAVYGGWRFLKVTSILDSDKRASSKFYPDLAGVIFSQLILHFVA 217          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A7S3EMN2_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMN2_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 9.420e-23
Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 0
Query:   20 GGGAAPNVRTVADVQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIY 153
            G  A  +V  V DV  W+  +G+ +YA+ F+ NEVDG  LKT+T +ELR+++ +   +HR +IL  +  L+   +      +PE GR+L  LSNVRTY SW  VGIQ   F+V  +RL P  R   L+   S++
Sbjct:   66 GRDALVDVIGVDDVVDWINAIGYPEYANKFVENEVDGRTLKTITQQELREEIGVTIPKHRSDILRRLDGLIMSTSRAQLDPIPEIGRVLSLLSNVRTYQSWTLVGIQLFIFSVGYMRLGPLIRPVWLVATGSLF 199          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A7S3ECN3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECN3_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 1.110e-15
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 0
Query:   33 VQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFR----DTNLITASSIYFSLIGISALVYGVYRY 169
            V +WL  +G   Y+  F+   VD  +LK+L+ ++LRD+L + N+  RR I   I  L+  +   D   LPE GRIL HL NVR +++WI   +Q L FAV       NF     D   I   +I   ++ I  L+ G +RY
Sbjct:   38 VVEWLERIGMGSYSAPFIEQTVDVSLLKSLSLKDLRDELGVTNMSDRRRIFNGILMLLSRDV--DKYALPEDGRILTHLFNVRVFNAWIRCAVQLLIFAVAV-----NFLVFCDDVTFIRNCAIGACIVAIVFLLVGFWRY 171          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A2V3IUE9_9FLOR (DUF202 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE9_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 8.600e-13
Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 0
Query:    7 RPCPL-PSVLVASNGGGAAPNVRTVAD---VQKWLADLGFSQYAHVFLTNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQKLPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTLTIL 211
            +P P+ P++    +   ++P    V D   VQK L   G + Y  +F  + +   +L++L++ ELRD++ +N L HRR++L     L +   S     +P  G IL HLSNVRT HSWI    Q +  ++   RL    RD  +    +I    +G    VYG +RY  V+  +E+       FS D VG V  L ++     L L +L
Sbjct:    3 KPMPVRPALTRHRSSRHSSPQQDAVLDAPFVQK-LHQNGLAAYVPLFEAHNLSEHVLQSLSNAELRDEVRMNVLAHRRKML----SLTQPARSCG---VPVFGAILVHLSNVRTCHSWIRTTFQAVILSLAVSRLGA-LRDERIALGVAIGICCMGAVHSVYGGWRYLAVMKRVENG----MRFSADTVGAVLALCVSLCVAALVLLVL 198          
BLAST of Gchil3408.t1 vs. uniprot
Match: A0A7S3A7Q0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7Q0_9RHOD)

HSP 1 Score: 65.9 bits (159), Expect = 2.670e-10
Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 0
Query:  101 LPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITASSIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLAFAAVVLTL 208
            +PE GR L  LSNVRTY SW  VGIQ   F+V  +RL P  R   L+   S++ ++  I    Y    Y+  + ++ +S P+ +  +P    VV + ++     +LT+
Sbjct:   11 IPEIGRGLSLLSNVRTYQSWTLVGIQLFIFSVGYMRLGPLIRPVWLVATGSLFAAVSAIGVFTYAGVSYRRFLAVLRNSSPNRRVLTPAYRAVVVLAVIELVIFLLTI 118          
The following BLAST results are available for this feature:
BLAST of Gchil3408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3J467_9FLOR1.650e-9071.14SAM domain-containing protein n=1 Tax=Gracilariops... [more]
A0A1X6P5I1_PORUM3.380e-6550.69SAM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S2ZTG3_9RHOD4.670e-5550.53Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSG0_PORPP1.110e-4946.41SAM domain-containing protein n=1 Tax=Porphyridium... [more]
A0A7S1XIP6_9RHOD4.790e-4555.97Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A1X6PDD2_PORUM5.040e-2838.46SAM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S3EMN2_9RHOD9.420e-2340.30Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ECN3_9RHOD1.110e-1536.17Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IUE9_9FLOR8.600e-1331.58DUF202 domain-containing protein n=1 Tax=Gracilari... [more]
A0A7S3A7Q0_9RHOD2.670e-1033.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 25..92
e-value: 2.0E-10
score: 50.6
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 29..89
e-value: 2.9E-13
score: 50.0
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 28..92
score: 15.245288
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 109..171
e-value: 2.3E-8
score: 34.4
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 24..95
e-value: 2.8E-16
score: 61.8
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 26..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 116..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:1007817..1008464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3408.t1Gchil3408.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 1007817..1008464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3408.t1 ID=Gchil3408.t1|Name=Gchil3408.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=216bp
METSPPRPCPLPSVLVASNGGGAAPNVRTVADVQKWLADLGFSQYAHVFL
TNEVDGVILKTLTSEELRDDLLINNLRHRREILVAIARLVEEEASPDAQK
LPEHGRILDHLSNVRTYHSWISVGIQFLGFAVVTLRLSPNFRDTNLITAS
SIYFSLIGISALVYGVYRYKNVIGMIESSGPSTKHFSPDRVGVVSILLLA
FAAVVLTLTILALRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR003807DUF202
IPR013761SAM/pointed_sf