Gchil7488.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7488.t1
Unique NameGchil7488.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length366
Homology
BLAST of Gchil7488.t1 vs. uniprot
Match: A0A2V3J287_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J287_9FLOR)

HSP 1 Score: 460 bits (1183), Expect = 2.530e-159
Identity = 229/365 (62.74%), Postives = 283/365 (77.53%), Query Frame = 0
Query:    1 MKPAFITAMVAHGPPSRRKRATNRAPPSHSK-RQRVPLSELTRKYRANARDVEESLLVDDSLVLDATSSHSPQ-----PKPQLSHVSTFRSAVNYSRFPASWQETVSQVTNAVTTAAADGHDRIRVDVKTPELLNSAGCVSTLSLQNLSQKSRRLARLVECACAILKQYLPNGTISDRQLAFFTPRKACLFFNTEDDAAAARQFVDPSLQEFVEVLVLNQTTSYNLTSTVSVIIAPCNRQSNPSHIEAVERVHYSNWNDDKVVVLLNPDLVALTRFPSFGDHPRQPSFLGDYLLSYYLDPVAYPTKTATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQKNPPSPEKIRCEFSWRIENELHAERT 359
            MKPAFI AMVA GPPS+R+ AT RAPP+    R+RV +SELT+KYRA ARD +E+LL+ D+L    + + + Q     P P  S  + + S V +SRFP+SWQE V+QVT AVTTAAADGHDRIRVDVKTPEL+ +    S      LS+  RR+ARLVECA + L+++L     +  + AFFTP++ CLFFN E DA   + +++PSL+  V+V VL+  +SY+L ST+SV+IAP NR  NPSHIEAVERVHYS+WND K+V++LNPDL+AL++F SFG+ PRQP FLGDYLLSYYLDPVA+PTKTATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQK PPSPE+IRCEFSWRIEN++  +R 
Sbjct:    1 MKPAFIMAMVAQGPPSKRRNATTRAPPARKPPRKRVRISELTQKYRAGARDNDEALLIGDNLPTPTSEAATQQSRESHPLPTHSQHAQYHSPVRFSRFPSSWQEAVTQVTTAVTTAAADGHDRIRVDVKTPELIYTPPNASDPHSAKLSRAHRRIARLVECANSTLREFLIISDSNRSKYAFFTPQRGCLFFNNEHDAEIGKAYLEPSLRALVDVHVLDDISSYSLKSTISVLIAPSNRHGNPSHIEAVERVHYSSWNDQKLVIMLNPDLMALSKFTSFGEEPRQPCFLGDYLLSYYLDPVAFPTKTATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQKTPPSPERIRCEFSWRIENDMETQRV 365          
BLAST of Gchil7488.t1 vs. uniprot
Match: R7QLD5_CHOCR (DUF1995 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD5_CHOCR)

HSP 1 Score: 280 bits (716), Expect = 8.870e-89
Identity = 153/320 (47.81%), Postives = 197/320 (61.56%), Query Frame = 0
Query:   41 TRKYRANARDVEESLLVDDSLVLDATSSHSPQPKPQLSHVSTFRSAVNYSRFPASWQETVSQVTNAVTTAAADGHDRIRVDVKTPELLNSA---GCVSTLSLQNLSQKSRRLARLVECACAILKQYLPNGTISDRQLAFFT-PRKACLFFNTEDDAAAARQFVDPSLQEFVEVLVLNQTTSYNLTSTVSVIIAPCNRQSNPSHIEAVERVHYSNWNDDKVVVLLNPDLVALTRFPSFGDHPRQPSFLGDYLLSYYLDPVAYPTKTATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQKNPPSPEKIRCEFSWRIENELHA 356
            TRKYR      +ESL+V D   L A  S +P              AV +SRFP SW+ET +QV+ AV  AA +GHDRIRVDVK PELL +         + L + S  + R+A L + AC  +   +       R       P +A + FN+ +DA    +F+   +++F +V VL +       + ++V+IAP NRQ N + IE VE VHY+NW+  K+ V+ NP L+ALT   +FGD PR+P FL DYL SYYLD  A+P+KTATGAVLRCFPRKWEMYLLKV + MGFRLVAEQ  PPSPEKIR EFSWRIE+E+  
Sbjct:   44 TRKYRDTRDPADESLMVGDP-ALPAYPSRAP--------------AVRFSRFPGSWEETAAQVSRAVVHAALEGHDRIRVDVKRPELLVNEFPDPLRKDVPLLDTSPHACRVALLTQVACDTIYALIQLDHSDKRNYRLCVKPMRAAVHFNSREDALVGDRFISDEVRQFTDVFVLGEKKKDRPKADIAVMIAPTNRQGNFAQIEKVELVHYANWSAPKINVMFNPQLIALTSLTAFGDEPREPGFLRDYLRSYYLDAAAFPSKTATGAVLRCFPRKWEMYLLKVQSKMGFRLVAEQPAPPSPEKIRGEFSWRIESEMET 348          
BLAST of Gchil7488.t1 vs. uniprot
Match: M2Y1T0_GALSU (DUF1995 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1T0_GALSU)

HSP 1 Score: 73.9 bits (180), Expect = 4.300e-11
Identity = 65/261 (24.90%), Postives = 111/261 (42.53%), Query Frame = 0
Query:   92 FPASWQETVSQVTNAVTTAAADGHDRIRVDVKTPELLNSAGCVSTLSLQNLSQKSRRLARLVECACAILKQYLPNGTISDRQLAFFTPRKACLFFNTEDDAAAARQFVDPSLQEFVEVLVLN--QTTSYNLTSTVSVIIAPCNRQSNPSH-IEAVERVHYSNWNDDKVVVLLNPDLVALTRFPSFGDHPRQPSFLGDYLLSYYLDPVAYPTKTATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQKNP--PSPEKIRCEFS 347
            FP S +E V Q ++AV  AA D + R+RV+++ P          TLS      +   LA      C                  F    K    F           F+D  L   + V  ++  Q+   ++   + +I+ P N   +    +E +ER+ YS  + +K +VL N  + A T     G  P +P  L D+ ++Y++ P          ++LRC+PR WE+++L++  ++  +    +  P  PS E+I  E S
Sbjct:   85 FPLSLEEAVQQASSAVVKAAEDNYKRLRVELQYP----------TLSTVGSLLEYGELAYFCNMVCE----------------TFLGQSKRVHLFGDTHHILNLVPFLDTRLFNSISVSCIDDVQSGGRHIMEDICLILLPSNVGYDMGRRMERIERLIYSV-SHNKHIVLFNACMEACTSLTCSG-RPFEPMILNDFHIAYFIHPNILRQGCIQSSLLRCYPRNWELFVLRLPRDISSKYFLAKSFPSKPSMERIETEVS 317          
The following BLAST results are available for this feature:
BLAST of Gchil7488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J287_9FLOR2.530e-15962.74DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
R7QLD5_CHOCR8.870e-8947.81DUF1995 domain-containing protein n=1 Tax=Chondrus... [more]
M2Y1T0_GALSU4.300e-1124.90DUF1995 domain-containing protein n=1 Tax=Galdieri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 93..342
e-value: 2.2E-23
score: 83.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR35509DOMAIN PROTEIN, PUTATIVE (DUF1995)-RELATEDcoord: 43..346
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1490889..1491986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7488.t1Gchil7488.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1490889..1491986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7488.t1 ID=Gchil7488.t1|Name=Gchil7488.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=366bp
MKPAFITAMVAHGPPSRRKRATNRAPPSHSKRQRVPLSELTRKYRANARD
VEESLLVDDSLVLDATSSHSPQPKPQLSHVSTFRSAVNYSRFPASWQETV
SQVTNAVTTAAADGHDRIRVDVKTPELLNSAGCVSTLSLQNLSQKSRRLA
RLVECACAILKQYLPNGTISDRQLAFFTPRKACLFFNTEDDAAAARQFVD
PSLQEFVEVLVLNQTTSYNLTSTVSVIIAPCNRQSNPSHIEAVERVHYSN
WNDDKVVVLLNPDLVALTRFPSFGDHPRQPSFLGDYLLSYYLDPVAYPTK
TATGAVLRCFPRKWEMYLLKVHNNMGFRLVAEQKNPPSPEKIRCEFSWRI
ENELHAERTHRFLIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995