Gchil7531.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7531.t1
Unique NameGchil7531.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length191
Homology
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BLAST of Gchil7531.t1 vs. uniprot
Match: A0A2V3J2H7_9FLOR (ATP synthase subunit d, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2H7_9FLOR)

HSP 1 Score: 225 bits (574), Expect = 2.810e-72
Identity = 104/190 (54.74%), Postives = 143/190 (75.26%), Query Frame = 0 
Query:    1 MFCALLARGALRARPCITHNVRRSLAAAVTSENEMEQFDPTKLFQEFSDSSVRSELSKIRDVEAELLQAISVKDAPIEWEQWKKEINYPGLVDELKSAYEAVPAPDVEDARKKADEQVTATFKPIIEELSALAQEAXXXXXXXXXXCEEIAFLKDNFSEMPIDDFLEKFPTVKKSLEDDISNNKWFLRES 190
            M  + + RG LR+R  I H  RRS AAA T ENE++ FDP++ F +FSD++VRSELSKIRD+E+EL+QA+ VK+ PI+WEQW  +I YPGLVDELKS YEA P PD+ + +K  D+++ A F+PIIEE S +A+EA          CEEI +L+DN + + +D+FL+K+P VKKS+EDDI+NN+WF+R+S
Sbjct:    1 MIVSSVLRGVLRSRAPILHTARRSYAAATTKENEIQSFDPSQWFPQFSDTAVRSELSKIRDIESELMQALDVKEVPIDWEQWNIQIKYPGLVDELKSLYEATPVPDIAETKKAIDDEIEAVFQPIIEEFSKMAKEAEAETAELEKRCEEITYLRDNIANLTVDEFLDKYPAVKKSIEDDIANNRWFVRDS 190
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BLAST of Gchil7531.t1 vs. uniprot
Match: R7QR29_CHOCR (ATP synthase subunit d, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR29_CHOCR)

HSP 1 Score: 138 bits (348), Expect = 2.540e-37
Identity = 62/156 (39.74%), Postives = 97/156 (62.18%), Query Frame = 0 
Query:   34 EMEQFDPTKLFQEFSDSSVRSELSKIRDVEAELLQAISVKDAPIEWEQWKKEINYPGLVDELKSAYEAVPAPDVEDARKKADEQVTATFKPIIEELSALAQEAXXXXXXXXXXCEEIAFLKDNFSEMPIDDFLEKFPTVKKSLEDDISNNKWFLRE 189
            + E+F PT  FQEF D  +RS+L+ +R++E + ++ +S     I W++W+  + YPGLV ELK  +E  P PDV   ++   +++   F PI+ E + L +EA            E+ FL+DN   + +D+FLEK+PTVK S+EDDI+NN+WF+ E
Sbjct:   95 QTERFKPTDWFQEFQDPQIRSQLNSLRELEDDAIRMVSADATTINWDEWESSVKYPGLVKELKEIHENAPVPDVTAEKEIFAKKLDELFDPILAEFAKLGKEAEETVVELEQRASEVTFLRDNIDTLTVDEFLEKYPTVKASIEDDIANNRWFVSE 250
The following BLAST results are available for this feature:
BLAST of Gchil7531.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2H7_9FLOR2.810e-7254.74ATP synthase subunit d, mitochondrial n=1 Tax=Grac... [more]
R7QR29_CHOCR2.540e-3739.74ATP synthase subunit d, mitochondrial n=1 Tax=Chon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 8..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 13..190
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialGENE3D6.10.280.70coord: 32..151
e-value: 6.5E-13
score: 50.7
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialSUPERFAMILY161065ATP synthase D chain-likecoord: 56..150
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPFAMPF05873Mt_ATP-synt_Dcoord: 65..174
e-value: 2.7E-14
score: 53.3
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPANTHERPTHR12700ATP SYNTHASE SUBUNIT D, MITOCHONDRIALcoord: 30..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1783547..1784119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7531.t1Gchil7531.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1783547..1784119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7531.t1 ID=Gchil7531.t1|Name=Gchil7531.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=191bp
MFCALLARGALRARPCITHNVRRSLAAAVTSENEMEQFDPTKLFQEFSDS
SVRSELSKIRDVEAELLQAISVKDAPIEWEQWKKEINYPGLVDELKSAYE
AVPAPDVEDARKKADEQVTATFKPIIEELSALAQEAEAEAEELEKQCEEI
AFLKDNFSEMPIDDFLEKFPTVKKSLEDDISNNKWFLRES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036228ATP_synth_F0_dsu_sf_mt
IPR008689ATP_synth_F0_dsu_mt