Gchil10804.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10804.t1
Unique NameGchil10804.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length359
Homology
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BLAST of Gchil10804.t1 vs. uniprot
Match: A0A2V3IKP3_9FLOR (Kinesin-like protein KIF21B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKP3_9FLOR)

HSP 1 Score: 469 bits (1208), Expect = 2.400e-163
Identity = 225/358 (62.85%), Postives = 285/358 (79.61%), Query Frame = 0 
Query:    1 MNGPNRRQSALWTVGKASRGLLQCSDRHRDLIIAGTALTSTENSIHILAVDCEKISLQPLNVLTAPSEVWSQEVVSKDTNLNIIAATRKGYRSAVEVWSLTGADDLSPRISESPSWEASGYDAHPIRNTSFMAIDGDILKVLKNPVTTSTYLALTETRATFLSVGSSLQINLSLQVNHSKFPVKYEDDIFVDAGWLDENTAFISSTKCFAACDMRTGEFELVTDTEKSINASVSSESGVQIAPHPTRISSTLSMHGTNMIVGGEDGSLRAYDWKNSNVVWQLPRAHAQWVSTLCKTRNGEFLSGGMDGVVYCWKSDGKALATFPQHDDIVTNATSFDTAFITVSYDGRLAMNELPSST 358
            M    R+Q+ALWTVG+ SRGLL+CSDR R L+IAGTA+T+ EN+IHIL+VD ++ISL PLNVLT PSEVWS EVV KD+NL+++AATRKGYRSAVEVWSL  ADDLSPR S+   W +S Y+A PIRNTSF+AIDGDILKV+KNP  +S+Y+ALT+  A FL+VG SL+I ++  +  +K  +  E D  VDAGW+DENTA+++ST+C   CD RTG    V +T+K+I++   S  G+Q+  HPTRIS++L++ G  ++VGGEDGSLR Y+ K SNVVWQ+  AH QWVSTLC+T+ G FLSGGMDGVV CW+ DG+ +ATFPQHDDIVTNA SFD AF+TVSYDGR+A+NELP +T
Sbjct:    1 MTESKRKQAALWTVGRGSRGLLRCSDRRRKLVIAGTAVTNDENAIHILSVDNDEISLTPLNVLTTPSEVWSLEVVGKDSNLHLVAATRKGYRSAVEVWSLMRADDLSPRASQPSEWGSSEYEAAPIRNTSFLAIDGDILKVVKNPSDSSSYMALTKKSAVFLTVGISLKIGVASSLESTKLLLMSETDSLVDAGWIDENTAYVASTRCLGICDTRTGTLGSVIETDKAISSYCKSGDGLQVPSHPTRISTSLAIGGDQVVVGGEDGSLRCYECKTSNVVWQVSNAHTQWVSTLCETQGGGFLSGGMDGVVRCWRKDGQPVATFPQHDDIVTNACSFDNAFVTVSYDGRIALNELPVAT 358
The following BLAST results are available for this feature:
BLAST of Gchil10804.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKP3_9FLOR2.400e-16362.85Kinesin-like protein KIF21B n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 316..353
e-value: 120.0
score: 3.9
coord: 234..272
e-value: 63.0
score: 5.6
coord: 275..314
e-value: 0.033
score: 23.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 22..354
e-value: 2.4E-14
score: 55.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 191..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000138_piloncontigtig00000138_pilon:1230976..1232052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1Gchil10804.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000138_pilon 1230976..1232052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=359bp
MNGPNRRQSALWTVGKASRGLLQCSDRHRDLIIAGTALTSTENSIHILAV
DCEKISLQPLNVLTAPSEVWSQEVVSKDTNLNIIAATRKGYRSAVEVWSL
TGADDLSPRISESPSWEASGYDAHPIRNTSFMAIDGDILKVLKNPVTTST
YLALTETRATFLSVGSSLQINLSLQVNHSKFPVKYEDDIFVDAGWLDENT
AFISSTKCFAACDMRTGEFELVTDTEKSINASVSSESGVQIAPHPTRISS
TLSMHGTNMIVGGEDGSLRAYDWKNSNVVWQLPRAHAQWVSTLCKTRNGE
FLSGGMDGVVYCWKSDGKALATFPQHDDIVTNATSFDTAFITVSYDGRLA
MNELPSST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf