Gchil10804.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10804.t1
Unique NameGchil10804.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length359
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000138_piloncontigtig00000138_pilon:1230976..1232052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10804Gchil10804Gracilaria chilensis NLEC103_M9 malegenetig00000138_pilon 1230976..1232052 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1.start1Gchil10804.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000138_pilon 1230976..1230978 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1.CDS1Gchil10804.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000138_pilon 1230976..1232052 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1.exon1Gchil10804.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000138_pilon 1230976..1232052 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1.stop1Gchil10804.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000138_pilon 1232050..1232052 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10804.t1Gchil10804.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000138_pilon 1230976..1232052 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=359bp
MNGPNRRQSALWTVGKASRGLLQCSDRHRDLIIAGTALTSTENSIHILAV
DCEKISLQPLNVLTAPSEVWSQEVVSKDTNLNIIAATRKGYRSAVEVWSL
TGADDLSPRISESPSWEASGYDAHPIRNTSFMAIDGDILKVLKNPVTTST
YLALTETRATFLSVGSSLQINLSLQVNHSKFPVKYEDDIFVDAGWLDENT
AFISSTKCFAACDMRTGEFELVTDTEKSINASVSSESGVQIAPHPTRISS
TLSMHGTNMIVGGEDGSLRAYDWKNSNVVWQLPRAHAQWVSTLCKTRNGE
FLSGGMDGVVYCWKSDGKALATFPQHDDIVTNATSFDTAFITVSYDGRLA
MNELPSST*
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spliced messenger RNA

>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1077bp|location=Sequence derived from alignment at tig00000138_pilon:1230976..1232052+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGGACCAAATCGCAGACAATCCGCTCTTTGGACGGTTGGCAAAGC
ATCACGCGGCTTGCTGCAGTGTTCTGACAGGCACAGAGATCTTATAATTG
CGGGCACCGCTCTCACCAGCACCGAAAATTCCATCCATATTCTCGCTGTG
GATTGTGAAAAGATATCCTTGCAGCCTTTGAACGTTCTCACCGCACCGTC
CGAGGTTTGGTCGCAAGAGGTAGTAAGCAAAGACACCAACTTAAATATCA
TAGCAGCAACGCGAAAGGGATACAGATCTGCTGTGGAAGTGTGGTCTCTG
ACAGGTGCTGATGACTTGTCGCCACGCATTTCTGAATCCCCGTCATGGGA
AGCCAGTGGATACGACGCACACCCCATCCGGAACACATCTTTTATGGCAA
TTGATGGGGACATCTTAAAGGTTTTGAAGAACCCCGTCACCACATCAACG
TATTTGGCATTAACTGAAACTAGAGCAACGTTCTTGTCAGTTGGATCCTC
CCTGCAGATTAACCTTTCTTTGCAGGTCAACCATTCAAAGTTTCCAGTCA
AGTACGAAGACGACATATTCGTTGACGCGGGATGGTTAGATGAGAACACT
GCCTTTATTTCATCGACAAAGTGCTTCGCAGCATGTGACATGCGAACTGG
TGAGTTTGAGCTCGTCACTGACACAGAGAAATCGATCAATGCTTCCGTCT
CCTCCGAAAGCGGTGTGCAAATTGCTCCTCACCCTACCCGAATATCATCA
ACCTTATCTATGCACGGTACAAATATGATTGTGGGAGGGGAGGATGGCTC
TCTTAGAGCTTATGACTGGAAGAATTCTAATGTGGTCTGGCAATTACCTC
GCGCACATGCTCAATGGGTTTCGACTCTGTGCAAGACTCGGAACGGAGAG
TTTCTCAGTGGTGGAATGGACGGGGTTGTGTATTGTTGGAAAAGCGACGG
CAAAGCTTTAGCCACATTCCCGCAACACGATGATATCGTGACTAATGCCA
CCAGTTTCGACACGGCGTTTATCACTGTTTCATACGACGGAAGACTTGCG
ATGAATGAACTGCCAAGTTCTACTTGA
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protein sequence of Gchil10804.t1

>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=359bp
MNGPNRRQSALWTVGKASRGLLQCSDRHRDLIIAGTALTSTENSIHILAV
DCEKISLQPLNVLTAPSEVWSQEVVSKDTNLNIIAATRKGYRSAVEVWSL
TGADDLSPRISESPSWEASGYDAHPIRNTSFMAIDGDILKVLKNPVTTST
YLALTETRATFLSVGSSLQINLSLQVNHSKFPVKYEDDIFVDAGWLDENT
AFISSTKCFAACDMRTGEFELVTDTEKSINASVSSESGVQIAPHPTRISS
TLSMHGTNMIVGGEDGSLRAYDWKNSNVVWQLPRAHAQWVSTLCKTRNGE
FLSGGMDGVVYCWKSDGKALATFPQHDDIVTNATSFDTAFITVSYDGRLA
MNELPSST*
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mRNA from alignment at tig00000138_pilon:1230976..1232052+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1077bp|location=Sequence derived from alignment at tig00000138_pilon:1230976..1232052+ (Gracilaria chilensis NLEC103_M9 male)
ATGAACGGACCAAATCGCAGACAATCCGCTCTTTGGACGGTTGGCAAAGC
ATCACGCGGCTTGCTGCAGTGTTCTGACAGGCACAGAGATCTTATAATTG
CGGGCACCGCTCTCACCAGCACCGAAAATTCCATCCATATTCTCGCTGTG
GATTGTGAAAAGATATCCTTGCAGCCTTTGAACGTTCTCACCGCACCGTC
CGAGGTTTGGTCGCAAGAGGTAGTAAGCAAAGACACCAACTTAAATATCA
TAGCAGCAACGCGAAAGGGATACAGATCTGCTGTGGAAGTGTGGTCTCTG
ACAGGTGCTGATGACTTGTCGCCACGCATTTCTGAATCCCCGTCATGGGA
AGCCAGTGGATACGACGCACACCCCATCCGGAACACATCTTTTATGGCAA
TTGATGGGGACATCTTAAAGGTTTTGAAGAACCCCGTCACCACATCAACG
TATTTGGCATTAACTGAAACTAGAGCAACGTTCTTGTCAGTTGGATCCTC
CCTGCAGATTAACCTTTCTTTGCAGGTCAACCATTCAAAGTTTCCAGTCA
AGTACGAAGACGACATATTCGTTGACGCGGGATGGTTAGATGAGAACACT
GCCTTTATTTCATCGACAAAGTGCTTCGCAGCATGTGACATGCGAACTGG
TGAGTTTGAGCTCGTCACTGACACAGAGAAATCGATCAATGCTTCCGTCT
CCTCCGAAAGCGGTGTGCAAATTGCTCCTCACCCTACCCGAATATCATCA
ACCTTATCTATGCACGGTACAAATATGATTGTGGGAGGGGAGGATGGCTC
TCTTAGAGCTTATGACTGGAAGAATTCTAATGTGGTCTGGCAATTACCTC
GCGCACATGCTCAATGGGTTTCGACTCTGTGCAAGACTCGGAACGGAGAG
TTTCTCAGTGGTGGAATGGACGGGGTTGTGTATTGTTGGAAAAGCGACGG
CAAAGCTTTAGCCACATTCCCGCAACACGATGATATCGTGACTAATGCCA
CCAGTTTCGACACGGCGTTTATCACTGTTTCATACGACGGAAGACTTGCG
ATGAATGAACTGCCAAGTTCTACTTGA
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Coding sequence (CDS) from alignment at tig00000138_pilon:1230976..1232052+

>Gchil10804.t1 ID=Gchil10804.t1|Name=Gchil10804.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1077bp|location=Sequence derived from alignment at tig00000138_pilon:1230976..1232052+ (Gracilaria chilensis NLEC103_M9 male)
ATGAACGGACCAAATCGCAGACAATCCGCTCTTTGGACGGTTGGCAAAGC
ATCACGCGGCTTGCTGCAGTGTTCTGACAGGCACAGAGATCTTATAATTG
CGGGCACCGCTCTCACCAGCACCGAAAATTCCATCCATATTCTCGCTGTG
GATTGTGAAAAGATATCCTTGCAGCCTTTGAACGTTCTCACCGCACCGTC
CGAGGTTTGGTCGCAAGAGGTAGTAAGCAAAGACACCAACTTAAATATCA
TAGCAGCAACGCGAAAGGGATACAGATCTGCTGTGGAAGTGTGGTCTCTG
ACAGGTGCTGATGACTTGTCGCCACGCATTTCTGAATCCCCGTCATGGGA
AGCCAGTGGATACGACGCACACCCCATCCGGAACACATCTTTTATGGCAA
TTGATGGGGACATCTTAAAGGTTTTGAAGAACCCCGTCACCACATCAACG
TATTTGGCATTAACTGAAACTAGAGCAACGTTCTTGTCAGTTGGATCCTC
CCTGCAGATTAACCTTTCTTTGCAGGTCAACCATTCAAAGTTTCCAGTCA
AGTACGAAGACGACATATTCGTTGACGCGGGATGGTTAGATGAGAACACT
GCCTTTATTTCATCGACAAAGTGCTTCGCAGCATGTGACATGCGAACTGG
TGAGTTTGAGCTCGTCACTGACACAGAGAAATCGATCAATGCTTCCGTCT
CCTCCGAAAGCGGTGTGCAAATTGCTCCTCACCCTACCCGAATATCATCA
ACCTTATCTATGCACGGTACAAATATGATTGTGGGAGGGGAGGATGGCTC
TCTTAGAGCTTATGACTGGAAGAATTCTAATGTGGTCTGGCAATTACCTC
GCGCACATGCTCAATGGGTTTCGACTCTGTGCAAGACTCGGAACGGAGAG
TTTCTCAGTGGTGGAATGGACGGGGTTGTGTATTGTTGGAAAAGCGACGG
CAAAGCTTTAGCCACATTCCCGCAACACGATGATATCGTGACTAATGCCA
CCAGTTTCGACACGGCGTTTATCACTGTTTCATACGACGGAAGACTTGCG
ATGAATGAACTGCCAAGTTCTACTTGA
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