Gchil7343.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7343.t1
Unique NameGchil7343.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length214
Homology
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A2V3J5P9_9FLOR (Chlorophyll a-b binding protein 6, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P9_9FLOR)

HSP 1 Score: 368 bits (944), Expect = 7.170e-128
Identity = 169/213 (79.34%), Postives = 190/213 (89.20%), Query Frame = 0
Query:    1 MTAFIAPIVTGFSGAIRGQDVCRAPRVSRSALTMKMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKALPGHLY 213
            M AF+AP VTGFS ++RG+ VC APRVSRSA++MK+SP+MPFMEQP++LDD SIVGNVGFDPLNLS VF++KFMQEAEIKHCR+AML VLGY+VPE F FPWGK LNPIEAHDFFVKTGGMSQILLF SF E+FG +AL  TLQG+R PGYFGFDPLGLGKDP KFKRY LSE+KNGRLAMCAFGG YHATLL+ QG  EQL++FKALPGHLY
Sbjct:    1 MFAFVAPAVTGFSASLRGKAVCNAPRVSRSAVSMKVSPSMPFMEQPATLDDGSIVGNVGFDPLNLSQVFDLKFMQEAEIKHCRVAMLAVLGYVVPEFFLFPWGKTLNPIEAHDFFVKTGGMSQILLFVSFFEVFGTLALIRTLQGERAPGYFGFDPLGLGKDPEKFKRYHLSELKNGRLAMCAFGGFYHATLLTNQGVFEQLSNFKALPGHLY 213          
BLAST of Gchil7343.t1 vs. uniprot
Match: R7QUA5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUA5_CHOCR)

HSP 1 Score: 325 bits (832), Expect = 8.570e-111
Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 0
Query:    1 MTAFIAPIVTGFSGAIRGQDVCRAPRVSRSALTMKMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKALP 209
            MTAF+AP+VTGFS ++ G  VCRA  VSR A++MK+SPAMPFMEQP+SLDD SI GN GFDP NLS  FN+K+MQEAEIKHCR+AMLGVLG ++PEI +FP  K + P EAHDFFVKTGGMSQILLF SF EIFG++AL+ TL G R PGYF FDPLGLGK+P  FK+YQLSEIKNGRLAMCAFGGLYHA L+SK G ++QL HF+ +P
Sbjct:    1 MTAFVAPVVTGFSSSLSGTRVCRAATVSRHAVSMKISPAMPFMEQPASLDDPSIPGNAGFDPFNLSGAFNLKWMQEAEIKHCRVAMLGVLGVVIPEIIRFPGVKAMTPTEAHDFFVKTGGMSQILLFVSFFEIFGSVALKATLDGTRAPGYFAFDPLGLGKNPDVFKKYQLSEIKNGRLAMCAFGGLYHAGLVSKTGVIDQLTHFQGVP 209          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A5J4ZAY0_PORPP (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAY0_PORPP)

HSP 1 Score: 221 bits (564), Expect = 4.110e-70
Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 0
Query:    6 APIVTGFSGAIRGQDVCRAPRVSRSALTMKM--SPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPW--GKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKAL 208
            A  V+G  G  + + V R+   S +A  MKM  S +MPFME P +LD  S+VG+VGFDPL  +  F++K+M+EAE+KHCRI ML VLG++V EIF+ P   G P    +AHD+FV  G + QILLF SF E+FG +AL ET+QG REPG FGFDPL LGK+PA +++Y LSE+KNGRLAM A GG  H   + KQG L QLAHFK +
Sbjct:    3 AAFVSGL-GLAQARVVRRSVCSSVAAAPMKMVTSKSMPFMEAPPALDG-SMVGDVGFDPLGFTRTFDVKWMREAELKHCRICMLAVLGFVVQEIFRLPMYSGAPKLATDAHDYFVSQGALKQILLFISFFEVFGTVALWETMQGTREPGVFGFDPLNLGKNPASYEKYALSELKNGRLAMIAVGGFIHQMWVYKQGVLYQLAHFKPM 207          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A7S0F4D6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F4D6_9CRYP)

HSP 1 Score: 218 bits (556), Expect = 1.760e-68
Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0
Query:    3 AFIAPIVTGFSGAIRGQDVCRAPRVSRSALTM---------KMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGL--GKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKALPG 210
            +F+A   T  + A        AP  SR+A++            S ++PF++QP++LD  S+ G+VGFDPL  S VF++K ++EAE+KH RIAML VLG++V E + FP+   ++PIEAHD  VK+GGMSQILL+ SFLEIFG IAL +T+QG R PG F FDPLGL  GK+ A  ++YQL+EIK+GRLAM AFGG  H   ++KQG  EQL +FK +PG
Sbjct:   14 SFLAAAATAAAFAPAPAGRLSAPAASRAAVSRGPRMAVFEGSFSESVPFLKQPTNLDG-SLPGDVGFDPLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLLVKSGGMSQILLWTSFLEIFGGIALFQTIQGSRYPGDFSFDPLGLSQGKNEANLEKYQLAEIKHGRLAMIAFGGFAHQYFITKQGVFEQLGNFKPIPG 231          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A5J4YN76_PORPP (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN76_PORPP)

HSP 1 Score: 209 bits (533), Expect = 2.760e-65
Identity = 111/214 (51.87%), Postives = 148/214 (69.16%), Query Frame = 0
Query:    1 MTAFIAPIVTGFSGAIRGQDVCRAPRVSRSALTMKMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPW--GKPLNPIEAHDFFVKTGGMSQILLFASFLEIF-GAIALRETLQG--DREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKALP 209
            M AF++ +    +   RG  VC  P  ++ ++  K S ++PFME P++LD  S+VG+VGFDPL  S   ++KF++EAE+KHCRI ML  LG IV E++QFP+  G P    +AHD+FVK G ++QILLFASF+E+  G   + +T++G  DR PGYF FDPLGLGKD AKF+RYQLSE+KNGRLAM A GG  H   ++K   LEQL+  K LP
Sbjct:    8 MAAFVSSLGLARASVGRGA-VCTKPGSAQLSMMAK-SKSVPFMEAPAALDG-SMVGDVGFDPLGFSNYIDLKFLREAELKHCRICMLAALGIIVQEVYQFPFYSGAPRLATDAHDYFVKFGSLNQILLFASFIELVAGTPGIIQTMRGETDRAPGYFAFDPLGLGKDKAKFERYQLSELKNGRLAMIAVGGFIHQAWMAKVPVLEQLSTGKLLP 218          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A7S3A203_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A203_9RHOD)

HSP 1 Score: 208 bits (529), Expect = 7.850e-65
Identity = 103/184 (55.98%), Postives = 130/184 (70.65%), Query Frame = 0
Query:   29 RSALTMKMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWG---KPLNPIEAHDFFVKTGGMSQILLFASFLE-IFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKAL 208
            +  +TM  S AMPFME P +LD  ++ G+ GFDPL L+  F+IK+MQEAEIKH RI ML  LG++VPE+F  PW    K +  ++AHD+FVKTGG++Q+ LF S  E I G  AL+ T++G R PG FGFDPLGLGKDPAK K+ Q  E+ NGRLAMCA GG  H   + KQG L+QL HFK +
Sbjct:   24 KGVVTMLQSKAMPFMEAPPALDG-TLPGDNGFDPLGLTNYFDIKWMQEAEIKHGRICMLATLGFLVPELFTLPWAYFPKGILAVDAHDYFVKTGGLAQVNLFISGWEAIIGVAALQATMEGKRAPGDFGFDPLGLGKDPAKMKKNQTVELINGRLAMCAIGGFIHQQWIYKQGILDQLLHFKPM 206          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A7S1TDA8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDA8_9RHOD)

HSP 1 Score: 209 bits (532), Expect = 1.010e-64
Identity = 105/212 (49.53%), Postives = 143/212 (67.45%), Query Frame = 0
Query:    1 MTAFIAPIVTGFSGAIRGQDVCRAPRVSRSA--LTMKMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFP--WGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKAL 208
            M+AF+   +             + P VS+S   +TMK+S +MPFME P +LD  S+ G++GFDPL L+ VF+I++M+E+E+KH RIAML  +G++V E F  P  +   +  ++AHD+FVKTGGMSQ+LLF S LE+ G +AL ET+QG REPGYFGFDPL   KD A  K++  +E+KNGRLAM A GG  H   + K G ++ L HFKAL
Sbjct:   37 MSAFVLQAIPVGRSGFAASSTSKKP-VSKSVRGVTMKLSESMPFMEAPPALDG-SMAGDIGFDPLGLTKVFDIRWMRESELKHGRIAMLACVGFLVQEAFTLPAPYFPSMLAVDAHDYFVKTGGMSQLLLFLSALEVIGTVALAETMQGTREPGYFGFDPLNFSKDEASTKKFAENEVKNGRLAMIAIGGFIHYEWMYKTGIIDGLTHFKAL 246          
BLAST of Gchil7343.t1 vs. uniprot
Match: A8KCP5_GUITH (Light harvesting complex protein 5 n=3 Tax=Guillardia theta TaxID=55529 RepID=A8KCP5_GUITH)

HSP 1 Score: 208 bits (529), Expect = 1.910e-64
Identity = 107/200 (53.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query:   24 APRVSRSALTM---------KMSPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGL--GKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKALPGHL 212
            AP  SR+A++            S ++PF++QP++LD  S+ G+VGFDPL  S VF++K ++EAE+KH RIAML VLG++V E + FP+   ++PIEAHD  VK+GGMSQILL+ SFLEIFG IAL +T+QG R PG F FDPLGL  GK+ A  ++YQL+EIK+GRLAM AFGG  H   ++KQG  EQL      P  L
Sbjct:   27 APAASRAAISRGPRMAVFEGSFSESVPFLKQPTNLDG-SLPGDVGFDPLGFSEVFDVKVLREAELKHGRIAMLAVLGWLVQESYTFPFFDKVSPIEAHDLLVKSGGMSQILLWTSFLEIFGGIALFQTIQGTRYPGDFSFDPLGLSAGKNEANLEKYQLAEIKHGRLAMIAFGGFAHQYFITKQGVFEQLGTSSPSPASL 225          
BLAST of Gchil7343.t1 vs. uniprot
Match: L1IUF6_GUITC (Light-harvesting Chl a protein 10 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IUF6_GUITC)

HSP 1 Score: 205 bits (522), Expect = 1.130e-63
Identity = 98/172 (56.98%), Postives = 131/172 (76.16%), Query Frame = 0
Query:   37 SPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKAL 208
            S A+PF+++PS+LD  S VG+VGFDPL  S VF+++ ++EAE+KH R AML VLG+IV E++ FP+   + P++AHD+FV+ GG SQI+ + SF+EIFG +AL ETLQG REPG F FDPLGL KD A  +RY+L+EIK+ RLAM A GG  H   ++KQ  LEQL +FK+L
Sbjct:   43 SAAVPFLKRPSNLDG-SYVGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFIVQELYTFPFFPKMAPVDAHDYFVQQGGGSQIIFWISFVEIFGVVALFETLQGKREPGDFAFDPLGLAKDEATLERYRLAEIKHSRLAMIAIGGFIHQYWVTKQTVLEQLGNFKSL 213          
BLAST of Gchil7343.t1 vs. uniprot
Match: A0A7S0MBH1_9CRYP (Hypothetical protein n=4 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MBH1_9CRYP)

HSP 1 Score: 201 bits (512), Expect = 6.730e-62
Identity = 98/187 (52.41%), Postives = 134/187 (71.66%), Query Frame = 0
Query:   26 RVSRSALTMKM----SPAMPFMEQPSSLDDDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQFPWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPGYFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLEQLAHFKAL 208
            R SRSA  +KM    S A+PF+++PS+LD  ++ G+VGFDPL  S VF+++ ++EAE+KH R AML VLG+IV E++ FP+   L P++AHD+FV  GG  QI+ + SF+E+FG +AL ETLQG R PG F FDPL L KD A   RY+L+EIK+ RLAM A GG  H  +++K   LEQLA+F+ +
Sbjct:   44 RASRSACGLKMQGDFSAAVPFLKRPSNLDG-TLTGDVGFDPLGFSDVFDLRVLREAELKHGRFAMLAVLGFIVQEVYTFPFFPKLAPVDAHDYFVTQGGGQQIIFWISFVELFGVVALFETLQGKRAPGDFSFDPLNLAKDEATLDRYRLAEIKHSRLAMIAIGGFVHQAIITKTPVLEQLANFQPI 229          
The following BLAST results are available for this feature:
BLAST of Gchil7343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5P9_9FLOR7.170e-12879.34Chlorophyll a-b binding protein 6, chloroplastic n... [more]
R7QUA5_CHOCR8.570e-11171.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4ZAY0_PORPP4.110e-7055.07Chlorophyll a-b binding protein 1B-21, chloroplast... [more]
A0A7S0F4D6_9CRYP1.760e-6851.60Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A5J4YN76_PORPP2.760e-6551.87Chlorophyll a-b binding protein 1B-21, chloroplast... [more]
A0A7S3A203_9RHOD7.850e-6555.98Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TDA8_9RHOD1.010e-6449.53Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A8KCP5_GUITH1.910e-6453.50Light harvesting complex protein 5 n=3 Tax=Guillar... [more]
L1IUF6_GUITC1.130e-6356.98Light-harvesting Chl a protein 10 n=2 Tax=Guillard... [more]
A0A7S0MBH1_9CRYP6.730e-6252.41Hypothetical protein n=4 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 34..212
e-value: 7.5E-45
score: 155.2
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 22..204
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 34..211
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 46..190
e-value: 9.6E-38
score: 130.2
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 22..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:545624..546364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7343.t1Gchil7343.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 545624..546364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7343.t1 ID=Gchil7343.t1|Name=Gchil7343.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=214bp
MTAFIAPIVTGFSGAIRGQDVCRAPRVSRSALTMKMSPAMPFMEQPSSLD
DDSIVGNVGFDPLNLSTVFNIKFMQEAEIKHCRIAMLGVLGYIVPEIFQF
PWGKPLNPIEAHDFFVKTGGMSQILLFASFLEIFGAIALRETLQGDREPG
YFGFDPLGLGKDPAKFKRYQLSEIKNGRLAMCAFGGLYHATLLSKQGTLE
QLAHFKALPGHLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln