Gchil3043.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3043.t1
Unique NameGchil3043.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length512
Homology
BLAST of Gchil3043.t1 vs. uniprot
Match: A0A2V3IGP1_9FLOR (Mitochondrial phosphate carrier protein 2, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP1_9FLOR)

HSP 1 Score: 610 bits (1574), Expect = 2.030e-209
Identity = 327/505 (64.75%), Postives = 383/505 (75.84%), Query Frame = 0
Query:   12 PPRAARPRPAS--KPTPMSKSESLRDSVHSLVDGIVDDAVTAAMLKAEKARVQSLINNLVTRVQSDASATKPQPPTMQGVAIGDHRLRRIAHTPLTWTQTMDSLTLNIHVPDHVRKEHICIDFDSNSIGINIRSPGLAQPYFVLDRQFVSKIDVAGCMWGLEAASSSRKLIVEVEKANVQWWARLFTTDNVTDYSIVAQNDILLNGRALDTVAETTT---ITPSSAKSVVASEAQMDGLVEKSPEXXXXXXXXXXXXXXXXXXXXXEEASNATVPSQPQPSREQQSPRPTTRHKMLTRADLPKIVDQYRTAFEKGGPNSIESALQLATFYHHGIGVEQNDAEAARLYRHALENGALDPSAAFQLGLIYNQGAPGIEPNLEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLDPESAQQWFERANALNPQLKPPQLSKAQFAERLATASKLRRERMRRELPPEEKKRRKEQALQKVKYVAYGTTAVAGIGATMIAFRYWWRNRL 511
            PP A  P+P++  K  P   S SL  SV ++VD       T A L++EK RVQSLINNLVTRV SDA+AT    P +QGV +GDHRLRRI + PLTWTQTMDSLTLNIHVP  VRKEHI I FDSNSI I IRS    Q Y  L+R FV+ IDVAGCMWGLEAAS+SRKLIVE+EKA VQWWARLF+TD+V +YSIV  N +L+NG A     +T T     P+ ++S ++  A  +G+    P+                     +   NAT  ++ Q S E  SP  TTR +MLTRAD+PKIVDQYR AF+ GGP+SIESALQLATFYHHGIG++Q+DAEAARLYR+ALENGALD SAAFQLGLIYNQGAPG+EP+ EEAVRWWKLSAGLGNPV+MFNLGVM+LNGSGCDLDP  AQQWFERA+A+NPQLKPPQLSKAQFAER+ATA+KLRRER+RRELPPEEK+RRKEQALQKV+Y AYGT  VAG+  + +A R+WW+NRL
Sbjct:  329 PPTATHPKPSTPVKSKPPPPSNSLEHSVQNVVDXXXXXXXTQASLQSEKDRVQSLINNLVTRVHSDAAATDASTPKLQGVPMGDHRLRRIGNIPLTWTQTMDSLTLNIHVPHQVRKEHIRIHFDSNSIHIAIRSTASEQLYLDLNRTFVADIDVAGCMWGLEAASASRKLIVELEKAKVQWWARLFSTDDVAEYSIVTPNQMLVNGHAPQPNRDTATSETAQPAPSESDISPNA--NGVASNPPKLHQAHRQESSSLEQAVASVVDDIVQNATSAAEKQKS-EPSSPPRTTRQRMLTRADIPKIVDQYRAAFKSGGPSSIESALQLATFYHHGIGIKQDDAEAARLYRYALENGALDASAAFQLGLIYNQGAPGLEPDPEEAVRWWKLSAGLGNPVSMFNLGVMYLNGSGCDLDPLLAQQWFERAHAMNPQLKPPQLSKAQFAERMATAAKLRRERLRRELPPEEKQRRKEQALQKVRYAAYGTLFVAGLSISALAMRHWWQNRL 830          
BLAST of Gchil3043.t1 vs. uniprot
Match: M2XK53_GALSU (Sel1 domain protein repeat-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XK53_GALSU)

HSP 1 Score: 83.6 bits (205), Expect = 6.880e-14
Identity = 65/210 (30.95%), Postives = 101/210 (48.10%), Query Frame = 0
Query:  302 LTRADLPKIVDQYRTAFEKGGPNSIESALQLATFYHHGIGVEQNDAEAARLYRHALENGALDPSAAFQLGLIYNQGAPGIEPNLEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLDPESAQQWFERANALNPQLKPPQLSKAQFAERLATASKLRRERMRRELPPEEKKRRKEQALQKVKYVAYGTTAVAGIGATMIAFRYWWRNRL 511
            +T  ++ ++V+ YR   E+    S  +A  L   YH GI ++ N       YR AL+                 +G  GIE N E+A++ W++ A  GNP AM+NLGV++L+G+GC  D   A    + AN+L+P L  P +   Q +  L   +  R+      L  EE++R  E+     KY A+    +  IG T    R++  NRL
Sbjct:  157 VTPENVQQVVETYRRGVEE--KESGIAAFHLGRLYHFGICLDTN-------YREALQC----------------EGGYGIEQNWEQAIQLWQMGADNGNPYAMYNLGVLYLHGNGCQQDVTRALLLLKAANSLDPSLVIPDIPVFQQSTPLNKTT--RKXXXXXXLSEEERQRVYEEFRTLAKYCAWTGVGLCAIGITWKLIRHYLDNRL 339          
BLAST of Gchil3043.t1 vs. uniprot
Match: A0A1G5W0B1_9FIRM (TPR repeat n=1 Tax=Allisonella histaminiformans TaxID=209880 RepID=A0A1G5W0B1_9FIRM)

HSP 1 Score: 68.2 bits (165), Expect = 2.480e-8
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  329 ALQLATFYHHGIGVEQNDAEAARLYRHALE-NGALDPSAAFQLGLIYNQGAPGIEPNLEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLDPESAQQWFERA 431
            A  LA  Y  G GV+ N  +A + Y  A E +      AA +LG++Y  G PG+  +  +A+ W++ S  LG    +++L  M+  G GC +D E A Q +ERA
Sbjct:  334 AYNLADNYALGRGVKYNPKKAIKYYTMAYEQDDEASGEAANRLGMLYENGLPGLSVDFSKALAWYRKSVDLGCAPGLYDLAGMYDQGKGCTMDKEKALQLYERA 437          
BLAST of Gchil3043.t1 vs. uniprot
Match: UPI0011799E5E (caspase family protein n=1 Tax=Rhizobium arenae TaxID=1856850 RepID=UPI0011799E5E)

HSP 1 Score: 61.6 bits (148), Expect = 2.070e-6
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 0
Query:  327 ESALQLATFYHHGIGVEQNDAEAARLYRHALENGALDPSAAFQLGLIYNQGAPGIEPNLEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLDPESAQQW 427
            E+  +LA  Y  GIGV+Q+ AEA RLYR + + G  D  A   LG  + QG  G+  + ++A++ ++ +A L +P AMFN+  +  +G      PE + ++
Sbjct:  379 EATFELAKLYERGIGVQQDLAEALRLYRTSADMGFAD--AINDLGFFHYQGIQGLPRDPQKAIQLFQRAADLRHPQAMFNVAALIDDGVIPGKSPEDSARY 477          
BLAST of Gchil3043.t1 vs. uniprot
Match: A0A1W9I0V8_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium SG_bin8 TaxID=1827387 RepID=A0A1W9I0V8_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 2.510e-6
Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
Query:  327 ESALQLATFYHHGIGVEQNDAEAARLYRHALENGALD----PSAAFQ------LGLIYNQGAPGIEPNLEEAVRW---WKLSAGLGNPVAMFNLGVMFLNGSGCDLDPESAQQWFERA 431
            ES  +LA  Y  G GV+++D +A   +   +EN A D    P A +       LG  Y  G PG E   + A+ W   +  ++  G+P   + +G M+L+GSG D +P  A  W   A
Sbjct:   10 ESQWRLARRYARGEGVKRDDLQAFNWFSQIIENHADDDVSSPQAPYAKRAFVALGSYYLAGIPGTEIKQDFALAWRMFYHAASVFGDPEGQYQIGRMYLDGSGVDSNPRMAANWLRTA 127          
The following BLAST results are available for this feature:
BLAST of Gchil3043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IGP1_9FLOR2.030e-20964.75Mitochondrial phosphate carrier protein 2, mitocho... [more]
M2XK53_GALSU6.880e-1430.95Sel1 domain protein repeat-containing protein n=1 ... [more]
A0A1G5W0B1_9FIRM2.480e-835.58TPR repeat n=1 Tax=Allisonella histaminiformans Ta... [more]
UPI0011799E5E2.070e-634.65caspase family protein n=1 Tax=Rhizobium arenae Ta... [more]
A0A1W9I0V8_9PROT2.510e-632.20Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 364..400
e-value: 1.8E-7
score: 40.8
coord: 326..361
e-value: 4.0E-5
score: 33.0
coord: 401..436
e-value: 2.1E-5
score: 33.9
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 327..360
e-value: 0.0013
score: 19.4
coord: 364..400
e-value: 1.4E-5
score: 25.6
coord: 401..434
e-value: 6.3E-7
score: 29.9
IPR007052CS domainPFAMPF04969CScoord: 105..172
e-value: 3.7E-8
score: 34.2
IPR007052CS domainPROSITEPS51203CScoord: 99..195
score: 14.198931
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 99..206
e-value: 1.1E-17
score: 66.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 98..204
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 219..484
e-value: 1.8E-35
score: 125.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..299
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 311..433
coord: 305..388
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 485..507
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..484
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 508..511
NoneNo IPR availableCDDcd06467p23_NUDC_likecoord: 105..195
e-value: 1.57822E-14
score: 66.8022
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 309..437
NoneNo IPR availableTMHMMTMhelixcoord: 485..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1323011..1324546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3043.t1Gchil3043.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000106_pilon 1323011..1324546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3043.t1 ID=Gchil3043.t1|Name=Gchil3043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=512bp
MASSTSLSLTPPPRAARPRPASKPTPMSKSESLRDSVHSLVDGIVDDAVT
AAMLKAEKARVQSLINNLVTRVQSDASATKPQPPTMQGVAIGDHRLRRIA
HTPLTWTQTMDSLTLNIHVPDHVRKEHICIDFDSNSIGINIRSPGLAQPY
FVLDRQFVSKIDVAGCMWGLEAASSSRKLIVEVEKANVQWWARLFTTDNV
TDYSIVAQNDILLNGRALDTVAETTTITPSSAKSVVASEAQMDGLVEKSP
EKSETVEQRLKQTVESVVDDIVEEASNATVPSQPQPSREQQSPRPTTRHK
MLTRADLPKIVDQYRTAFEKGGPNSIESALQLATFYHHGIGVEQNDAEAA
RLYRHALENGALDPSAAFQLGLIYNQGAPGIEPNLEEAVRWWKLSAGLGN
PVAMFNLGVMFLNGSGCDLDPESAQQWFERANALNPQLKPPQLSKAQFAE
RLATASKLRRERMRRELPPEEKKRRKEQALQKVKYVAYGTTAVAGIGATM
IAFRYWWRNRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR007052CS_dom
IPR008978HSP20-like_chaperone
IPR011990TPR-like_helical_dom_sf