Gchil2972.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2972.t1
Unique Name	Gchil2972.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	104

Homology

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A5J4YUW1_PORPP (Histone H4 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUW1_PORPP)

HSP 1 Score: 191 bits (484), Expect = 7.630e-61
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLES+IRDAVTYTEHARRKTV +MDV+YALKRQGRTLYGFG
Sbjct:   33 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESIIRDAVTYTEHARRKTVTAMDVIYALKRQGRTLYGFG 134

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A812V1L2_SYMMI (Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A812V1L2_SYMMI)

HSP 1 Score: 188 bits (477), Expect = 3.100e-60
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A7S4DKQ9_9EUKA (Histone H4 n=6 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S4DKQ9_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 4.530e-60
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLESVIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:   13 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLESVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 114

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BLAST of Gchil2972.t1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=19 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 187 bits (474), Expect = 8.880e-60
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A4QN89_DANRE (Histone H4 n=10 Tax=Bilateria TaxID=33213 RepID=A4QN89_DANRE)

HSP 1 Score: 187 bits (474), Expect = 8.880e-60
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHA+RKTV++MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVIAMDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 187 bits (474), Expect = 9.170e-60
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: H4_ARATH (Histone H4 n=270 Tax=Eukaryota TaxID=2759 RepID=H4_ARATH)

HSP 1 Score: 186 bits (473), Expect = 1.260e-59
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLE+VIRDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A168QLX8_ABSGL (Histone H4 n=8 Tax=cellular organisms TaxID=131567 RepID=A0A168QLX8_ABSGL)

HSP 1 Score: 186 bits (473), Expect = 1.260e-59
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            MAGRGKGGKGLGKGGAKRHRK+LRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+VIRDAVTYTEHA+RKTV S+DVVYALKRQGRTLYGFG
Sbjct:    1 MAGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A2U1J020_SMIAN (Histone H4 n=36 Tax=cellular organisms TaxID=131567 RepID=A0A2U1J020_SMIAN)

HSP 1 Score: 186 bits (473), Expect = 1.260e-59
Identity = 94/102 (92.16%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRK+LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNV+K+FLE+VIRDAVTYTEHA+RKTV S+DVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVIKIFLENVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFG 102

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BLAST of Gchil2972.t1 vs. uniprot
Match: A0A0D2MLB1_9CHLO (Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0D2MLB1_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 1.260e-59
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYGFG 102
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLE+V+RDAVTYTEHARRKTV +MDVVYALKRQGRTLYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

The following BLAST results are available for this feature:

BLAST of Gchil2972.t1 vs. uniprot

BLAST of Gchil2972.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5J4YUW1_PORPP	7.630e-61	96.08	Histone H4 n=2 Tax=Porphyridium purpureum TaxID=35...	[more]
A0A812V1L2_SYMMI	3.100e-60	96.08	Histone H4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8...	[more]
A0A7S4DKQ9_9EUKA	4.530e-60	96.08	Histone H4 n=6 Tax=Chlorarachniophyceae TaxID=2919...	[more]
C1MUM2_MICPC	8.880e-60	95.10	Histone H4 n=19 Tax=Eukaryota TaxID=2759 RepID=C1M...	[more]
A4QN89_DANRE	8.880e-60	94.12	Histone H4 n=10 Tax=Bilateria TaxID=33213 RepID=A4...	[more]
A0A7S3RVL2_9SPIT	9.170e-60	95.10	Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re...	[more]
H4_ARATH	1.260e-59	94.12	Histone H4 n=270 Tax=Eukaryota TaxID=2759 RepID=H4...	[more]
A0A168QLX8_ABSGL	1.260e-59	94.12	Histone H4 n=8 Tax=cellular organisms TaxID=131567...	[more]
A0A2U1J020_SMIAN	1.260e-59	92.16	Histone H4 n=36 Tax=cellular organisms TaxID=13156...	[more]
A0A0D2MLB1_9CHLO	1.260e-59	94.12	Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 62..76 score: 90.2 coord: 89..100 score: 97.79 coord: 5..16 score: 95.59 coord: 77..89 score: 77.38 coord: 40..60 score: 90.62 coord: 20..39 score: 93.38
IPR001951	Histone H4	SMART	SM00417	h44	coord: 16..90 e-value: 2.9E-27 score: 106.6
IPR001951	Histone H4	CDD	cd00076	H4	coord: 19..101 e-value: 7.18326E-42 score: 130.699
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 34..96 e-value: 4.6E-8 score: 33.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..103 e-value: 8.9E-56 score: 188.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 1..102
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..102
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000106_pilon	contig	tig00000106_pilon:648163..648474 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2972.t1	Gchil2972.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000106_pilon 648163..648474 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2972.t1 ID=Gchil2972.t1|Name=Gchil2972.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=104bp
MAGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRNVLKVFLESVIRDAVTYTEHARRKTVVSMDVVYALKRQGRTLYG
FGN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR035425	CENP-T/H4_C
IPR009072	Histone-fold
IPR019809	Histone_H4_CS