Gchil8565.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8565.t1
Unique Name	Gchil8565.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	271

Homology

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BLAST of Gchil8565.t1 vs. uniprot
Match: A0A2V3IXW2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXW2_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 1.110e-29
Identity = 84/262 (32.06%), Postives = 124/262 (47.33%), Query Frame = 0

Query:    5 FVRPTGPKSALDVQNARSLHLLMLLQCFEFMIAENTRFKSFLLIQRDLLGFVSPTAATPNRLRDAALRPFKNLSQFSANYFDHLSHENHAMHQALLRRKLALEAYRNEMNTMQNNSKNDAAKTRVGPPSAPPNPQNDTRTFQQKVSKRTERFTAIAKDSEAMLKELANTVIMSFRVACAPAEAASDAVTKLPPTSMKNFVKNVERNVGELPGLPTFPAPLVRRYGLEPIPDASSLAAAETRFSPFLTDVNCAAILQRSNPKR 266
            F RPT P++A     AR  H+ MLLQC  F +++    ++ LL QR+ LG VSPT ATP+RL  A +  FKN+SQF+AN+ DH  HE   +H   L R  AL+     +  +                          RT  Q  S     F ++  ++E  ++     + +++  A APAE  +DA TK  P    + ++N+  N    P L   P PL  R  ++P+P AS L       +PFL D +    LQ ++  R
Sbjct:   99 FNRPTSPQAAQKQLAARITHVQMLLQCITFSLSQTLNIRNLLLSQREKLGLVSPTGATPDRLPTAQMLAFKNVSQFAANFIDHFLHELKPIHDMQLNRIRALQILHQNLTNLP-------------------------RTTAQGTS-----FQSLILETEDEIRSQTKHITVAYCAASAPAELLTDAQTKRTPRDAPSVLRNLALNSQARPMLHNVPPPLQLRSDVQPVPQASVLNQMVLDHAPFLEDYHVQQALQSAHAAR 330

The following BLAST results are available for this feature:

BLAST of Gchil8565.t1 vs. uniprot

BLAST of Gchil8565.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXW2_9FLOR	1.110e-29	32.06	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..126

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:295416..296228 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8565.t1	Gchil8565.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 295416..296228 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8565.t1 ID=Gchil8565.t1|Name=Gchil8565.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=271bp
MTSPFVRPTGPKSALDVQNARSLHLLMLLQCFEFMIAENTRFKSFLLIQR
DLLGFVSPTAATPNRLRDAALRPFKNLSQFSANYFDHLSHENHAMHQALL
RRKLALEAYRNEMNTMQNNSKNDAAKTRVGPPSAPPNPQNDTRTFQQKVS
KRTERFTAIAKDSEAMLKELANTVIMSFRVACAPAEAASDAVTKLPPTSM
KNFVKNVERNVGELPGLPTFPAPLVRRYGLEPIPDASSLAAAETRFSPFL
TDVNCAAILQRSNPKRLDGS*