Gchil8654.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8654.t1
Unique Name	Gchil8654.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	80

Homology

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: R7QJN7_CHOCR (Ubiquitin-like domain-containing protein n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QJN7_CHOCR)

HSP 1 Score: 147 bits (371), Expect = 8.210e-45
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGGT 77
            MLVKVKLLTG QTEIDIDPTDTIWRIK+RVEEKAGIDPKQQRLIFGG+QLADDR AN+YNIEGGSVLHLVIALRGG+
Sbjct:    1 MLVKVKLLTGTQTEIDIDPTDTIWRIKQRVEEKAGIDPKQQRLIFGGRQLADDRPANDYNIEGGSVLHLVIALRGGS 77

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A5J4YSB8_PORPP (Nedd8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSB8_PORPP)

HSP 1 Score: 142 bits (357), Expect = 1.380e-42
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGGTA 78
            MLVKVKLLTGNQTEIDIDPTDTI RIKERVEEKAGIDP+QQRLIFGG+QLAD++ AN+YNIEGGSVLHLVIALRGG A
Sbjct:    1 MLVKVKLLTGNQTEIDIDPTDTIARIKERVEEKAGIDPQQQRLIFGGRQLADEKTANDYNIEGGSVLHLVIALRGGGA 78

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A7S1XHP2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHP2_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 1.370e-41
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGGTA 78
            MLVKVKLLTGNQTEIDID TDTI RIKERVEEKAGIDPKQQRLIFGG+QLAD++ A EYNIEGGSVLHLVIALRGG A
Sbjct:    1 MLVKVKLLTGNQTEIDIDATDTIARIKERVEEKAGIDPKQQRLIFGGRQLADEKTAKEYNIEGGSVLHLVIALRGGAA 78

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A1X6NL36_PORUM (Ubiquitin-like domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL36_PORUM)

HSP 1 Score: 135 bits (340), Expect = 4.810e-40
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGG 76
            MLVKVKLLTG QTEIDID TDTI RIKERVEEK GIDP+QQRLIFGGKQLADD+ A+EYNIEGGSVLHLVIALRGG
Sbjct:    1 MLVKVKLLTGTQTEIDIDSTDTIARIKERVEEKDGIDPRQQRLIFGGKQLADDKRADEYNIEGGSVLHLVIALRGG 76

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: M1V5H3_CYAM1 (Ubiquitin-like protein Rub1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V5H3_CYAM1)

HSP 1 Score: 124 bits (311), Expect = 2.750e-35
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGG 76
            MLVKVK LTG + E+DI+P D I RIKER+EEK GI P+QQRLIFGGKQLADDR+A EYNIEGGSVLHLV+ALRGG
Sbjct:   30 MLVKVKTLTGKEVELDIEPHDPIQRIKERIEEKEGIPPQQQRLIFGGKQLADDRSAREYNIEGGSVLHLVLALRGG 105

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: NEDD8_DICDI (NEDD8 n=6 Tax=Dictyostelia TaxID=33083 RepID=NEDD8_DICDI)

HSP 1 Score: 122 bits (307), Expect = 4.510e-35
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGG 76
            ML+KVK LTG + EIDIDPTD I RIKERVEEK GI P QQRLIFGGKQ+ DD+ A+EY+IEGGSVLHLV+ALRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGG 76

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: W1NUM7_AMBTC (Ubiquitin-like domain-containing protein n=2 Tax=Viridiplantae TaxID=33090 RepID=W1NUM7_AMBTC)

HSP 1 Score: 120 bits (302), Expect = 3.910e-34
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 0

Query:    1 MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGG 76
            M++KVK LTG + EIDI+PTDTI RIK+RVEEK GI P QQRLI+GGKQ+ DD+ A EYNIEGGSVLHLV+ALRGG
Sbjct:    7 MMIKVKTLTGKEVEIDIEPTDTIERIKQRVEEKEGIPPVQQRLIYGGKQMNDDKTAKEYNIEGGSVLHLVLALRGG 82

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A5P1F206_ASPOF (Ubiquitin-like domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A5P1F206_ASPOF)

HSP 1 Score: 120 bits (300), Expect = 5.130e-34
Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 0

Query:    2 LVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGG 76
            ++KVK LTG + EIDI+PTDTI RIKERVEEK GI P QQRLI+ GKQLADD+ A EYNIEGGSVLHLV+ALRGG
Sbjct:    1 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGG 75

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A151R9A0_CAJCA (NEDD8-like protein RUB2 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9A0_CAJCA)

HSP 1 Score: 122 bits (305), Expect = 1.230e-33
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 0

Query:    2 LVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGGT 77
            ++KVK LTG + EIDI+PTDTI RIKERVEEK GI P QQRLI+ GKQLADD+ A EYNIEGGSVLHLV+ALRGGT
Sbjct:   90 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGT 165

[Close]

BLAST of Gchil8654.t1 vs. uniprot
Match: A0A0K9RBV6_SPIOL (Uncharacterized protein n=27 Tax=Spermatophyta TaxID=58024 RepID=A0A0K9RBV6_SPIOL)

HSP 1 Score: 121 bits (304), Expect = 1.310e-33
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0

Query:    2 LVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQLADDRAANEYNIEGGSVLHLVIALRGGTA 78
            ++KVK LTG + EIDI+PTDTI RIKERVEEK GI P QQRLI+ GKQLADD+ A EYNIEGGSVLHLV+ALRGG A
Sbjct:   78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGAA 154

The following BLAST results are available for this feature:

BLAST of Gchil8654.t1 vs. uniprot

BLAST of Gchil8654.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7QJN7_CHOCR	8.210e-45	92.21	Ubiquitin-like domain-containing protein n=2 Tax=R...	[more]
A0A5J4YSB8_PORPP	1.380e-42	89.74	Nedd8 n=1 Tax=Porphyridium purpureum TaxID=35688 R...	[more]
A0A7S1XHP2_9RHOD	1.370e-41	89.74	Hypothetical protein n=1 Tax=Erythrolobus australi...	[more]
A0A1X6NL36_PORUM	4.810e-40	89.47	Ubiquitin-like domain-containing protein n=1 Tax=P...	[more]
M1V5H3_CYAM1	2.750e-35	78.95	Ubiquitin-like protein Rub1 n=1 Tax=Cyanidioschyzo...	[more]
NEDD8_DICDI	4.510e-35	77.63	NEDD8 n=6 Tax=Dictyostelia TaxID=33083 RepID=NEDD8...	[more]
W1NUM7_AMBTC	3.910e-34	75.00	Ubiquitin-like domain-containing protein n=2 Tax=V...	[more]
A0A5P1F206_ASPOF	5.130e-34	77.33	Ubiquitin-like domain-containing protein n=3 Tax=E...	[more]
A0A151R9A0_CAJCA	1.230e-33	77.63	NEDD8-like protein RUB2 n=1 Tax=Cajanus cajan TaxI...	[more]
A0A0K9RBV6_SPIOL	1.310e-33	76.62	Uncharacterized protein n=27 Tax=Spermatophyta Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 53..74 score: 49.37 coord: 11..31 score: 22.68 coord: 32..52 score: 68.79
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 2.0E-20 score: 83.9
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 6.8E-24 score: 83.4
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 23.723507
None	No IPR available	GENE3D	3.10.20.90		coord: 1..78 e-value: 1.7E-29 score: 103.4
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..77
None	No IPR available	PANTHER	PTHR10666:SF319	NEDD8	coord: 1..77
IPR038738	Nedd8-like ubiquitin	CDD	cd01806	Ubl_NEDD8	coord: 3..76 e-value: 1.34047E-40 score: 125.964
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:922076..922315 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8654.t1	Gchil8654.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 922076..922315 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8654.t1 ID=Gchil8654.t1|Name=Gchil8654.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=80bp
MLVKVKLLTGNQTEIDIDPTDTIWRIKERVEEKAGIDPKQQRLIFGGKQL
ADDRAANEYNIEGGSVLHLVIALRGGTAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR038738	Nedd8-like
IPR029071	Ubiquitin-like_domsf