Gchil8681.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8681.t1
Unique Name	Gchil8681.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	529

Homology

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BLAST of Gchil8681.t1 vs. uniprot
Match: A0A2V3IN04_9FLOR (AMPK1_CBM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN04_9FLOR)

HSP 1 Score: 837 bits (2161), Expect = 8.660e-303
Identity = 419/520 (80.58%), Postives = 460/520 (88.46%), Query Frame = 0

Query:    1 MLGRRAAGRRNKLFRDRGEAQIPLSPPAAPDRFHKAIPFAQPTLIDSNVPTTFLWPDPRHQHASVVLVASFDAFLHHRMRPTHSQPRKFTITLRVPPGSHTYKFLVDGVWCTCSALHNQHPIETKDDGVRHHRLVVTAAERSCRNGNPQMVPSRGHESVNSAAHSTAVFRSASASAVPPIQERADPTLPANAFQPQTSSVSHQDTGRHKVEVAPRGTSFTSPPPIGGITHMKSITRKSLLHRVGSGWLRRFSGRM-DADGEFGCSFSMSQTQFFARDRSGSGLFRGSRDRVSLFPSASEPSVGRCPTDDKENSFSANRLNGFGNSNDRGHSRRQTFRGSNRGTAVKISRPTKVDEPKDMDEVNRQADNWRQMARHLQDDLCDPTGARELFTKAIQHREKHGLWCTSQNAQVHVDLARNLSKGDRMKDAELHLRLALRIYNEIDAGKEHIADLMLYVGVVVDRQKRRAEAEELYRKALNMYKEHDINGNNVEIAVKNLSLNLRKQNREHEIEAVRVEYGAI 519
            MLGRRAA RRN+L RDRGEAQI LSPPA PDRF  A+ +A     D NVPTTF+WPDP HQ ++VVLVASFDA LHHRMRPT S PR FTITLRV PGSHTYKFLVDGVW TC ALH+QHPIE  DDGV+HHRLVV+   R  R G P++VP+  H++  +  HSTAVFRSASASAVPPIQ+RA+ TLPAN FQPQ S+VSHQ+TGRHKVEVAPRG+SF SPPP+GGI+HMK+I RKSLL RVGSGWLRRFSGR+ + D E+GCSFSM+QTQF +RDRSGSGLFRGSRDRVSLFPSASEPSVGRCPTDDKENSF+ NR NGFG S+D+ HS+RQTFRGSNRG AVKISRP KV+EPKD+DEVNRQADNWRQMARHLQDDLCDPTGARELF KAIQHREKHGLWCTSQNAQVHVDLARNLSK DRMKDAELHLRL L+IYN+IDAGKEH+ADLMLYVGVVVDRQKRRAEAEELYRKALN+YKE+DI  NNVEIAVKNLSLNLRKQNREHEIEAVR++Y  I
Sbjct:    1 MLGRRAAARRNRLLRDRGEAQISLSPPAQPDRFQTALQYAAAAQTDGNVPTTFIWPDPHHQRSNVVLVASFDAHLHHRMRPTPSHPRNFTITLRVAPGSHTYKFLVDGVWSTCLALHDQHPIEVTDDGVKHHRLVVSPPGRLQRAGQPKVVPAHLHDNAVN-PHSTAVFRSASASAVPPIQQRAEATLPANVFQPQASTVSHQETGRHKVEVAPRGSSFNSPPPVGGISHMKAINRKSLLQRVGSGWLRRFSGRVVEGDSEYGCSFSMTQTQFMSRDRSGSGLFRGSRDRVSLFPSASEPSVGRCPTDDKENSFAGNRFNGFGFSHDKTHSKRQTFRGSNRGAAVKISRPMKVNEPKDIDEVNRQADNWRQMARHLQDDLCDPTGARELFNKAIQHREKHGLWCTSQNAQVHVDLARNLSKADRMKDAELHLRLTLKIYNKIDAGKEHVADLMLYVGVVVDRQKRRAEAEELYRKALNIYKENDIRSNNVEIAVKNLSLNLRKQNREHEIEAVRMDYADI 519

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BLAST of Gchil8681.t1 vs. uniprot
Match: A0A2V3J7R1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7R1_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 8.370e-28
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 0

Query:  343 AVKISRPTKVDEPKDMDEVNRQADNWRQMARHLQDDLC-DPTGARELFTKAIQHREKHGLWCTSQNAQVHVDLARNLSKGDRMKDAELHLRLALRIYNEIDA-GKEHIADLMLYVGVVVDRQKRRAEAEELYRKALNMYKEHDINGNNVEIAVKNLSLNLRKQNREHEIEAV 512
            A K+  PT  +  + +D     AD  R+ A  LQ  L  D  GA E F KA+  R KHGL+CT  NA  HV+ A+NLSK     +AE HLR A  IY  +DA       D++LY+ VV+DRQ R AEAE  YR AL +Y+++ ++ +NV + + +LS NLR Q R  E++ V
Sbjct:   98 AAKVVEPTISNSEEAID----YADLCRKHAASLQRCLPPDYEGAGEFFEKAVDARAKHGLFCTPDNADAHVEYAQNLSKRGLTPEAEYHLRSAADIYRMLDARSARKYGDVLLYMAVVIDRQGRLAEAENFYRSALAVYRKNKLSDDNVRVGIDSLSNNLRAQGRADEVDTV 265

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BLAST of Gchil8681.t1 vs. uniprot
Match: A0A7S1T700_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T700_9RHOD)

HSP 1 Score: 98.6 bits (244), Expect = 1.530e-18
Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 0

Query:  331 RRQTFRGSNRGTAV---KISRPTKVDEPKD-MDEVNRQADNWRQMARHLQDDLCDPTGARELFTKAIQHREKHGLWCTSQNAQVHVDLARNLSKGDRMKDAELHLRLALRIYNEID-AGKEHIADLMLYVGVVVDRQKR---RAEAEELYRKALNMYKEHDINGNNVEIAVKNLSLNLRKQNR 505
            +R T R SNR ++V    IS P   +   D M++ + +A  + + A+ L     D  GA   F KA++ REK  +  + ++ +V +D A  LSK  ++K+AE+ L+ AL+I+ +     KE   D++LY GVV+DRQK    R+ AEE YR AL +Y+E  I  +NVEIA KNL LNLRK+ +
Sbjct:  227 KRNTARNSNRESSVGRENISLPVAEEFGMDTMEDADHKAREYVKAAKMLH-KWGDFAGAALCFEKAVECREKFTIH-SFEHTEVLLDYAHVLSKQSKLKEAEVQLQKALKIWEKAPFPRKERKGDILLYYGVVLDRQKDETLRSLAEEQYRAALKIYEEAGIKSDNVEIARKNLQLNLRKRGK 407

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BLAST of Gchil8681.t1 vs. uniprot
Match: A0A7S1XDG6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDG6_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 6.270e-10
Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0

Query:  385 ARELFTKAIQHREKHGLWCTSQNAQVHVDLARNLSKGDRMKDAELHLRLALRIYNEIDA------GKEHIADLMLYVGVVVDRQKRRAEAEELYRKALNMYKEHDINGNNVEIAVKNLSLNLRKQNREHEIEAV 512
            A  L+  AI+ RE++ L  +  N   H+++   L   D    AE H R+AL ++   D        K+ + DL+ ++GV +D Q++R E+E  Y+KA+  Y+E+ + G NV+   +NL L  +K  +  +   V
Sbjct:  324 ALALYRIAIRLREENNLKMSPSNVFAHLEMGTTLFHLDEFSAAEQHFRIALAVWQHSDQINFVLEDKQRLGDLLQFLGVALDVQRKREESEYFYQKAIEKYEEYGVEGPNVDTCRENLELVRQKLRKAGQATGV 457

The following BLAST results are available for this feature:

BLAST of Gchil8681.t1 vs. uniprot

BLAST of Gchil8681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A2V3IN04_9FLOR	8.660e-303	80.58	AMPK1_CBM domain-containing protein n=1 Tax=Gracil...	[more]
A0A2V3J7R1_9FLOR	8.370e-28	43.02	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A7S1T700_9RHOD	1.530e-18	39.89	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]
A0A7S1XDG6_9RHOD	6.270e-10	30.60	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 358..378
None	No IPR available	PFAM	PF13424	TPR_12	coord: 408..481 e-value: 3.3E-7 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..328
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 50..128 e-value: 6.77895E-11 score: 56.4533
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 47..136 e-value: 4.7E-11 score: 44.5
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 49..129 e-value: 2.2E-9 score: 37.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 353..518 e-value: 4.6E-12 score: 47.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 378..505
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 47..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:1230852..1232438 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8681.t1	Gchil8681.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 1230852..1232438 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8681.t1 ID=Gchil8681.t1|Name=Gchil8681.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=529bp
MLGRRAAGRRNKLFRDRGEAQIPLSPPAAPDRFHKAIPFAQPTLIDSNVP
TTFLWPDPRHQHASVVLVASFDAFLHHRMRPTHSQPRKFTITLRVPPGSH
TYKFLVDGVWCTCSALHNQHPIETKDDGVRHHRLVVTAAERSCRNGNPQM
VPSRGHESVNSAAHSTAVFRSASASAVPPIQERADPTLPANAFQPQTSSV
SHQDTGRHKVEVAPRGTSFTSPPPIGGITHMKSITRKSLLHRVGSGWLRR
FSGRMDADGEFGCSFSMSQTQFFARDRSGSGLFRGSRDRVSLFPSASEPS
VGRCPTDDKENSFSANRLNGFGNSNDRGHSRRQTFRGSNRGTAVKISRPT
KVDEPKDMDEVNRQADNWRQMARHLQDDLCDPTGARELFTKAIQHREKHG
LWCTSQNAQVHVDLARNLSKGDRMKDAELHLRLALRIYNEIDAGKEHIAD
LMLYVGVVVDRQKRRAEAEELYRKALNMYKEHDINGNNVEIAVKNLSLNL
RKQNREHEIEAVRVEYGAIKLAPVGIMV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013783	Ig-like_fold
IPR032640	AMPK1_CBM
IPR011990	TPR-like_helical_dom_sf
IPR014756	Ig_E-set