Gchil8620.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8620.t1
Unique NameGchil8620.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length182
Homology
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A2V3IZ38_9FLOR (Malignant T-cell-amplified sequence 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ38_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 5.160e-101
Identity = 146/181 (80.66%), Postives = 165/181 (91.16%), Query Frame = 0
Query:    1 MFKRFSPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFKRFS ES SGQSAMKSSQQRAAR+ II QMP I+ Y+E FFPKKEKTI+VKCAGHL +L ++ G P+FFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGAD+MVPGLRSERAVIESEVEAGT VA++A++K+H IAVGIARMSSA+MR  DKGIAVEN+H+VSD LWKC++L
Sbjct:    1 MFKRFSSESVSGQSAMKSSQQRAARSKIIAQMPGIEAYAEDFFPKKEKTIMVKCAGHLFILASSGGTPLFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADIMVPGLRSERAVIESEVEAGTPVAIYAESKEHAIAVGIARMSSAEMRINDKGIAVENLHYVSDGLWKCSEL 181          
BLAST of Gchil8620.t1 vs. uniprot
Match: R7QM81_CHOCR (PUA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM81_CHOCR)

HSP 1 Score: 262 bits (669), Expect = 5.510e-87
Identity = 130/182 (71.43%), Postives = 154/182 (84.62%), Query Frame = 0
Query:    1 MFKRFS-PESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MF+RF+  ES SGQSAMKSSQQRAAR  I++Q+P+I+PY + FFPKKEKTI  KCAGH+++L +A G P+FFQTR+G Y PTLRTLHKYPFLLP LRVDRGAIKHVINGADVMVPGLRS RAVIE EVE    VAV+A++K+H I VGI +MSS QMR  DKGIAVE++H+VSD LWKC++L
Sbjct:    1 MFRRFTVEESVSGQSAMKSSQQRAARQKIVQQLPTIEPYIDSFFPKKEKTISAKCAGHVTILASAGGVPLFFQTRDGAYVPTLRTLHKYPFLLPILRVDRGAIKHVINGADVMVPGLRSSRAVIEDEVERNCVVAVYAESKEHAICVGITKMSSQQMRLNDKGIAVESMHYVSDGLWKCSEL 182          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A1X6NJD4_PORUM (PUA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJD4_PORUM)

HSP 1 Score: 195 bits (495), Expect = 1.550e-60
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = 0
Query:    1 MFKRFS-PESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFKRF+  ES SGQS +KSS QR  RA I+ Q+P+I+PY E   PKK+K +L K AGH++V+C+    P+FF  R+G Y PTLR L KYP LLP + VD GAI+HV+ GADVMVPGL+S RA I+ +V     V V+   K HP+AVG A ++S+ +R  DKG+ +EN HF+SD LWKC  L
Sbjct:    1 MFKRFTVDESVSGQSQIKSSLQRTIRAKILEQLPAIEPYFEDILPKKDKMVLAKVAGHINVVCSPAAEPLFFNVRDGPYCPTLRLLAKYPILLPRMCVDDGAIRHVMQGADVMVPGLKSPRAAID-DVPREAVVGVYGPGKDHPLAVGQALLASSAIRTVDKGVGIENWHFLSDGLWKCPTL 181          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A7S0G526_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G526_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 4.650e-55
Identity = 90/178 (50.56%), Postives = 127/178 (71.35%), Query Frame = 0
Query:    1 MFKRFSPESA-SGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWK 177
            MFKRF+ +   SGQS +KSS QR  R+ ++ QM  I+PY +   PKKEK +L KC  H++V+  +   P+FF  R+G Y P++R LHKYPF LP L+VD+GAIK V+ GAD+M PGL S  A ++ EVEAG  VA+ A+ K+H +AVG+ ++S+A +R+ +KGIAVE +H V+D L+K
Sbjct:    1 MFKRFTAKDGISGQSQVKSSVQRGIRSKVLDQMRDIEPYIDDILPKKEKVVLAKCQNHVNVVTLSGDAPLFFNERDGPYAPSIRLLHKYPFFLPKLQVDKGAIKFVLKGADIMCPGLTSPGARMDEEVEAGKIVAIHAEGKEHALAVGLTKLSTADIRSINKGIAVEMLHHVNDGLYK 178          
BLAST of Gchil8620.t1 vs. uniprot
Match: M2X3B4_GALSU (PUA domain protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3B4_GALSU)

HSP 1 Score: 180 bits (456), Expect = 1.460e-54
Identity = 83/178 (46.63%), Postives = 126/178 (70.79%), Query Frame = 0
Query:    1 MFKRFSPES-ASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWK 177
            MFK+F+P+     Q  +KSS QR+ R  I+ Q PS++P+ E   P+KEK IL+KC GH++++      P+FF  R G YFP+LR LH YPFLLP L+VD+GAI+H++ GAD+M PGL S  A ++ E+ +   V +FA+ K+H +AVG+ ++S+  ++  +KG+AVEN+H+++D LWK
Sbjct:    1 MFKKFNPQGDIVSQVPIKSSVQRSIRNQILEQFPSVEPFIEDILPRKEKWILIKCHGHMNLISINYEQPIFFNLRTGPYFPSLRLLHAYPFLLPRLQVDKGAIRHILKGADIMCPGLTSAGARMDEELGSNRMVGIFAEGKEHALAVGVTKLSTEDVKNVNKGVAVENIHYLNDGLWK 178          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A5J4YQ82_PORPP (Malignant T-cell-amplified sequence 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ82_PORPP)

HSP 1 Score: 176 bits (447), Expect = 3.170e-53
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 0
Query:    1 MFKRFSPE-SASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLC-NANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFK+FS E S S ++ +KSS QR  RA I  QMPS+  Y +   PKKEK ++VKC  H+S+LC      P+FF  R+G YFPTLR LH +P  LP ++VDRGAIKHV+ GAD+M PGL S  A +  E+E    VAV A+ KQH + +G  +MS+AQ+R  +KG+ +ENVH + D L+K   L
Sbjct:    1 MFKKFSSEVSVSSKAPVKSSVQRQMRARIEEQMPSLNEYMDELLPKKEKVLVVKCEEHVSLLCVEKKMEPLFFCVRDGPYFPTLRLLHMFPHALPRVQVDRGAIKHVMKGADIMCPGLTSPGAAMPVELEQNAIVAVMAEGKQHAVGIGRMKMSTAQIREVNKGVGIENVHHLGDGLFKTITL 183          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A0A0LYF6_CUCSA (PUA domain-containing protein n=16 Tax=Pentapetalae TaxID=1437201 RepID=A0A0A0LYF6_CUCSA)

HSP 1 Score: 174 bits (442), Expect = 1.650e-52
Identity = 85/181 (46.96%), Postives = 124/181 (68.51%), Query Frame = 0
Query:    1 MFKRFSPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFK+FS E  S Q+ +K+S QR  R +I  + P ++P  +   PKK   I+ KC  HL+++   N  P+FF  R+G Y PTLR LH+YP ++  L+VDRGAIK V+ GA++M PGL S   V++ EVEA T VA+ A+ KQH +A+G  +MS+ ++RAT+KGI V+N+H+++D LWK  +L
Sbjct:    1 MFKKFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVV-VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERL 180          
BLAST of Gchil8620.t1 vs. uniprot
Match: K3XME7_SETIT (PUA domain-containing protein n=20 Tax=Poaceae TaxID=4479 RepID=K3XME7_SETIT)

HSP 1 Score: 172 bits (436), Expect = 1.340e-51
Identity = 84/181 (46.41%), Postives = 123/181 (67.96%), Query Frame = 0
Query:    1 MFKRFSPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFK+FS E  SGQ+ +K+S QR  R +I  + PS++P  +   PKK   I+VKC  HL+++   N  P+FF  R+G Y PTLR LH+YP ++   +VDRGAIK V++GA++M PGL S   V++ EVE  T VA+ A+ KQH +A+G  +MS+  +R  +KGI V+N+H+++D LWK  +L
Sbjct:    1 MFKKFSSEDISGQNQVKASVQRRIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNLVV-VNNVPLFFNIRDGPYMPTLRLLHQYPEIMKKFQVDRGAIKFVLSGANIMCPGLTSPGGVLDDEVEEETPVAIMAEGKQHALAIGFTKMSAKDIRTINKGIGVDNMHYLNDGLWKMEKL 180          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A183BHW1_GLOPA (PUA domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BHW1_GLOPA)

HSP 1 Score: 172 bits (435), Expect = 2.090e-51
Identity = 87/179 (48.60%), Postives = 122/179 (68.16%), Query Frame = 0
Query:    1 MFKRF-SPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRN-GEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWK 177
            MFK+F S E   G   +K S Q++ RA ++ Q P I+PY +   PKKE   LVKC  HL ++ +ANG   F ++R+   YFPTLR LHKYPF+LP+ +VD+GAIK V+NG+ +M PGL S  A +    E GT VAV A+ KQH +A+G  ++SSA +RA + GIA++NVH+++D LW+
Sbjct:    1 MFKKFDSAEDVVGSQQLKGSVQKSIRAKLLEQYPDIEPYMDTILPKKENFKLVKCKDHLELIADANGTVQFVKSRDLAHYFPTLRLLHKYPFMLPNQQVDKGAIKFVLNGSHIMCPGLTSAGARLVDACEEGTLVAVMAEGKQHAMAIGQMKLSSADVRAQNVGIAIDNVHYMNDGLWR 179          
BLAST of Gchil8620.t1 vs. uniprot
Match: A0A1J6IS98_NICAT (PUA domain-containing protein n=17 Tax=Pentapetalae TaxID=1437201 RepID=A0A1J6IS98_NICAT)

HSP 1 Score: 171 bits (434), Expect = 2.700e-51
Identity = 83/181 (45.86%), Postives = 123/181 (67.96%), Query Frame = 0
Query:    1 MFKRFSPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTILVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRGAIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIARMSSAQMRATDKGIAVENVHFVSDCLWKCAQL 181
            MFK+F+ E  SGQ+ +K+S QR  R +I  + P+++P  E   PKK   I+ KC  HL+++   N  P+FF  R+G Y PTLR LH+YP ++  L+VDRGAIK V++GA++M PGL S    ++ EV A T VA+ A+ KQH +A+G  +MS+  +RA +KGI V+N+H+++D LWK  +L
Sbjct:    1 MFKKFTTEEVSGQNQVKASVQRRIRQSIAEEYPALEPVLEDLLPKKSPLIVAKCPNHLNLVV-VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDEVGAETPVAIMAEGKQHALAIGFTKMSAKDIRAMNKGIGVDNMHYLNDGLWKMERL 180          
The following BLAST results are available for this feature:
BLAST of Gchil8620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ38_9FLOR5.160e-10180.66Malignant T-cell-amplified sequence 2 n=1 Tax=Grac... [more]
R7QM81_CHOCR5.510e-8771.43PUA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6NJD4_PORUM1.550e-6054.40PUA domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S0G526_9RHOD4.650e-5550.56Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
M2X3B4_GALSU1.460e-5446.63PUA domain protein n=1 Tax=Galdieria sulphuraria T... [more]
A0A5J4YQ82_PORPP3.170e-5350.27Malignant T-cell-amplified sequence 1 n=1 Tax=Porp... [more]
A0A0A0LYF6_CUCSA1.650e-5246.96PUA domain-containing protein n=16 Tax=Pentapetala... [more]
K3XME7_SETIT1.340e-5146.41PUA domain-containing protein n=20 Tax=Poaceae Tax... [more]
A0A183BHW1_GLOPA2.090e-5148.60PUA domain-containing protein n=1 Tax=Globodera pa... [more]
A0A1J6IS98_NICAT2.700e-5145.86PUA domain-containing protein n=17 Tax=Pentapetala... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002478PUA domainSMARTSM00359pua_5coord: 93..172
e-value: 3.7E-11
score: 53.1
IPR002478PUA domainPFAMPF01472PUAcoord: 94..170
e-value: 3.5E-15
score: 55.7
IPR041366Pre-PUA domainPFAMPF17832Pre-PUAcoord: 7..89
e-value: 8.6E-22
score: 77.6
IPR016437MCT-1/Tma20PIRSFPIRSF005067Tma_RNA-bindcoord: 1..181
e-value: 1.4E-49
score: 166.6
IPR016437MCT-1/Tma20PANTHERPTHR22798MCT-1 PROTEINcoord: 1..180
IPR004521Uncharacterised domain CHP00451TIGRFAMTIGR00451TIGR00451coord: 65..173
e-value: 1.8E-22
score: 77.6
NoneNo IPR availableGENE3D3.10.400.20coord: 1..180
e-value: 7.7E-53
score: 180.9
NoneNo IPR availablePANTHERPTHR22798:SF0MALIGNANT T-CELL-AMPLIFIED SEQUENCE 1coord: 1..180
NoneNo IPR availablePROSITEPS50890PUAcoord: 92..172
score: 16.000292
NoneNo IPR availableCDDcd11609MCT1_Ncoord: 3..80
e-value: 3.63708E-28
score: 98.3755
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 92..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:629322..629867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8620.t1Gchil8620.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 629322..629867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8620.t1 ID=Gchil8620.t1|Name=Gchil8620.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=182bp
MFKRFSPESASGQSAMKSSQQRAARANIIRQMPSIQPYSEHFFPKKEKTI
LVKCAGHLSVLCNANGNPMFFQTRNGEYFPTLRTLHKYPFLLPSLRVDRG
AIKHVINGADVMVPGLRSERAVIESEVEAGTAVAVFADTKQHPIAVGIAR
MSSAQMRATDKGIAVENVHFVSDCLWKCAQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR041366Pre-PUA
IPR016437MCT-1/Tma20
IPR004521Uncharacterised_CHP00451
IPR015947PUA-like_sf