Gchil2047.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2047.t1
Unique NameGchil2047.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length359
Homology
BLAST of Gchil2047.t1 vs. uniprot
Match: A0A2V3IVF5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF5_9FLOR)

HSP 1 Score: 520 bits (1340), Expect = 8.200e-177
Identity = 266/358 (74.30%), Postives = 310/358 (86.59%), Query Frame = 0
Query:    1 MSQESAVVTREHLEYFCQEIVNHVGSASQKARALDSEERIATFLKLTELPLLQAIRSRVKERVEETDYEDLSVEQIQRSTRASFLAHLIADGLEDRSLDPFYMAQEHRSGKGFYEDEISRLRALHSSNSTITTDAIASTFIEAVRADYADRTRFGEIQAPDAAIVLTHDLSESLVNPFISLESMLGGVKTGIPCRKSASAIWRAVASKLDAFFFYDIVLQCFAGGSRNAMAVAAEINGFLSPTHMARMARKVAHDTSMFVSTFTAVSRNPPKFLPSCAECGVVLQMAASKVLRPNAPLKEEHQEALDALECVATSDEDEVVQAAKRALENAINVVHITPREALELCAIAGLRFAIRLM 358
            +SQE+  +T++ LEY CQE+V+H+GSASQKARAL+SEERI+TFLKLTELPLLQAIRSR+KE +E+TDYE+LS EQ+Q STRASF A LI++GLEDR+LDPFY+ QE R+G GFY+DEI RLRALH+SNSTI  DAIA++F EAVRA Y DR RFGEI  PDAAIVLTHDLSE+LVNP ISLESML  VK GIPCRKSAS IWR VA+KLD FFF DIVLQCFAGGSRNAMAVAAE+NGFLSPTHMARMAR+VA+DTSMFVSTF++V+ NP KFL SC+E G VLQ+AA++VLRPN P  + H+E LDAL  V  S+EDEV++ A+  LE+ I+V HITPREALELCAIAGLRFAIRLM
Sbjct:  461 ISQETTSLTKQELEYICQEVVDHIGSASQKARALESEERISTFLKLTELPLLQAIRSRLKEPIEDTDYENLSSEQVQHSTRASFCAQLISEGLEDRALDPFYITQEQRTGIGFYDDEIVRLRALHTSNSTIMIDAIANSFKEAVRAGYGDRARFGEIPTPDAAIVLTHDLSEALVNPLISLESMLSAVKNGIPCRKSASGIWREVAAKLDDFFFDDIVLQCFAGGSRNAMAVAAEVNGFLSPTHMARMARQVAYDTSMFVSTFSSVTSNPSKFLKSCSESGTVLQLAANRVLRPNVPPLQVHEEVLDALRRVKDSNEDEVMEDAQVVLESRISVSHITPREALELCAIAGLRFAIRLM 818          
BLAST of Gchil2047.t1 vs. uniprot
Match: R7QS95_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS95_CHOCR)

HSP 1 Score: 407 bits (1045), Expect = 3.910e-135
Identity = 204/357 (57.14%), Postives = 269/357 (75.35%), Query Frame = 0
Query:    2 SQESAVVTREHLEYFCQEIVNHVGSASQKARALDSEERIATFLKLTELPLLQAIRSRVKERVEETDYEDLSVEQIQRSTRASFLAHLIADGLEDRSLDPFYMAQEHRSGKGFYEDEISRLRALHSSNSTITTDAIASTFIEAVRADYADRTRFGEIQAPDAAIVLTHDLSESLVNPFISLESMLGGVKTGIPCRKSASAIWRAVASKLDAFFFYDIVLQCFAGGSRNAMAVAAEINGFLSPTHMARMARKVAHDTSMFVSTFTAVSRNPPKFLPSCAECGVVLQMAASKVLRPNAPLKEEHQEALDALECVATSDEDEVVQAAKRALENAINVVHITPREALELCAIAGLRFAIRLM 358
            + E ++ ++  LE  CQ+IV+HVG+AS K R+L+S+ERIA FLKLTELPLLQ++RS +K+ +E  D    + E I +S RASF A LI+D LEDRS+D FY+ QE RSG GFY DEI RLR+LHSSNS +  +AI S F++ V+  Y ++ RFGEI APDAA+VLTHDLSESLVNP  +LE+ L  +KTGIPCRK+AS +WR +ASKLD F F D+VLQCF G SRNAM+ A+  N +LS T  ARMA++VA D + FVSTF AV+ +P +FLPSCAECG +L++A+S+VL P+ P ++E +E +  L  VA SDED+++++A R L + I   HI PREALEL AI G++FAIR+M
Sbjct:  247 AHEKSISSKVDLEEICQDIVDHVGNASVKCRSLESQERIAMFLKLTELPLLQSLRSSLKQNIEVMDEICPTTEHIVKSARASFCALLISDSLEDRSVDHFYLRQEERSGTGFYNDEIVRLRSLHSSNSALLCEAITSVFVDGVKTGYLEQARFGEISAPDAAVVLTHDLSESLVNPLTALENSLXXLKTGIPCRKTASTVWRPIASKLDRFVFDDVVLQCFVGASRNAMSAASSANSYLSATTCARMAKQVAFDVTTFVSTFNAVTASPEQFLPSCAECGRLLRIASSRVLLPSVPPRQEDEEVVKCLLAVAKSDEDQILESASRVLSSRIGATHIAPREALELLAIGGMKFAIRMM 603          
BLAST of Gchil2047.t1 vs. uniprot
Match: A0A2V3IVA5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA5_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 2.120e-16
Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 MSQESAVVTREHLEYFCQEIVNHVGSASQKARALDSEERIATFLKLTELPLLQAIRSRVK 60
            +SQE+A++T   LEY CQEIV+++GS SQKARAL+SEER +TFLKLTEL LLQAIRSR+K
Sbjct:   83 ISQETALLTDRGLEYICQEIVDYIGSESQKARALESEERTSTFLKLTELSLLQAIRSRLK 142          
The following BLAST results are available for this feature:
BLAST of Gchil2047.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IVF5_9FLOR8.200e-17774.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QS95_CHOCR3.910e-13557.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVA5_9FLOR2.120e-1671.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000019_piloncontigtig00000019_pilon:257451..258527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2047.t1Gchil2047.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000019_pilon 257451..258527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2047.t1 ID=Gchil2047.t1|Name=Gchil2047.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=359bp
MSQESAVVTREHLEYFCQEIVNHVGSASQKARALDSEERIATFLKLTELP
LLQAIRSRVKERVEETDYEDLSVEQIQRSTRASFLAHLIADGLEDRSLDP
FYMAQEHRSGKGFYEDEISRLRALHSSNSTITTDAIASTFIEAVRADYAD
RTRFGEIQAPDAAIVLTHDLSESLVNPFISLESMLGGVKTGIPCRKSASA
IWRAVASKLDAFFFYDIVLQCFAGGSRNAMAVAAEINGFLSPTHMARMAR
KVAHDTSMFVSTFTAVSRNPPKFLPSCAECGVVLQMAASKVLRPNAPLKE
EHQEALDALECVATSDEDEVVQAAKRALENAINVVHITPREALELCAIAG
LRFAIRLM*
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