Gchil7723.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7723.t1
Unique Name	Gchil7723.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	424

Homology

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BLAST of Gchil7723.t1 vs. uniprot
Match: A0A2V3ITP9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP9_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 3.470e-71
Identity = 155/428 (36.21%), Postives = 226/428 (52.80%), Query Frame = 0

Query:    1 MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLAIAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPVREFYNDFDAGAPRIPYFPSQSFIRT-DSSIEKDPSDEEVVTEEAVPTGDCSGGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQ-VDGSTQRRVKAVTQAEAMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLCSELAGL-ECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEAIFYYNRIEIPLPLCTYTCPSDPLVRHTFVSKFVVQ----TSRPRDAVGYEDNLASLIRPAYDDYVLALPNCEDTPTRNGGFEKTYFTSFYNSRVNQLEKSLADSADNYGFTIAYIFFADQWPTTDDYIASVC 421
            M++  Y+S+P +    N+   S     S    + RF       K+ ++L IAA +  V+ + ++   +        SR++P   T   R S   +        Y+D      +  ++ ++S +    S+I  +  + + VT+EAVPT DCS GL+CRARLV+T      TVQAGYYIY   ++   +   T++RVKAVT  EA  WA  LL++LG KL EV+C ++ S IADAIM TK+  + C++T+ SLCSEL  L EC  + E  IE  CY F+ SD+ +    +L  GCPEA F YNRI +PLP C++TCPSDP V HTF ++F VQ     + P      ++ LA  IRPAY+   L LP C+  P     +        Y+  V    +  ++       T  Y++F  Q  +  DYI SVC
Sbjct:    1 MSSVGYNSIPQNPAPGNVTAASPLKHGSRNQANGRFSFPSVGRKLLSLLTIAAALVAVIFLVNNYVLELPRFSYHESRLVPRLST--SRNSNPFHFDAVHSHLYSD-----RKFSHWKARSSVSLLHSAIRSNICEVDSVTQEAVPTRDCSVGLWCRARLVVTKNDAGITVQAGYYIYTKRSKTMPITAQTKKRVKAVTPNEATKWAETLLEQLGTKLGEVDCNVSVSMIADAIMETKDVVASCSNTDDSLCSELVTLRECSCQVESVIEQSCYGFLTSDAQVGSFADLQGGCPEAKFMYNRIGVPLPYCSFTCPSDPSVIHTFDAEFHVQGGNHMTTPISREETQEALAVSIRPAYEKLFLPLPPCDHAPPFLDNYG-ALMHDIYSDSVMAEPEFFSNLTAELRLTYNYVYFLSQGTSRQDYINSVC 420

The following BLAST results are available for this feature:

BLAST of Gchil7723.t1 vs. uniprot

BLAST of Gchil7723.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ITP9_9FLOR	3.470e-71	36.21	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 63..423
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025321_pilon	contig	tig00025321_pilon:597022..598293 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7723.t1	Gchil7723.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025321_pilon 597022..598293 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=424bp
MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLA
IAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPV
REFYNDFDAGAPRIPYFPSQSFIRTDSSIEKDPSDEEVVTEEAVPTGDCS
GGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQVDGSTQRRVKAVTQAE
AMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLC
SELAGLECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEAIFYYNRI
EIPLPLCTYTCPSDPLVRHTFVSKFVVQTSRPRDAVGYEDNLASLIRPAY
DDYVLALPNCEDTPTRNGGFEKTYFTSFYNSRVNQLEKSLADSADNYGFT
IAYIFFADQWPTTDDYIASVCLV*