Gchil7723.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7723.t1
Unique NameGchil7723.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length424
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:597022..598293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7723Gchil7723Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 597022..598293 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7723.t1.stop1Gchil7723.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 597022..597024 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7723.t1.CDS1Gchil7723.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 597022..598293 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7723.t1.exon1Gchil7723.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 597022..598293 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7723.t1.start1Gchil7723.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 598291..598293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7723.t1Gchil7723.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 597022..598293 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=424bp
MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLA
IAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPV
REFYNDFDAGAPRIPYFPSQSFIRTDSSIEKDPSDEEVVTEEAVPTGDCS
GGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQVDGSTQRRVKAVTQAE
AMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLC
SELAGLECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEAIFYYNRI
EIPLPLCTYTCPSDPLVRHTFVSKFVVQTSRPRDAVGYEDNLASLIRPAY
DDYVLALPNCEDTPTRNGGFEKTYFTSFYNSRVNQLEKSLADSADNYGFT
IAYIFFADQWPTTDDYIASVCLV*
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spliced messenger RNA

>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1272bp|location=Sequence derived from alignment at tig00025321_pilon:597022..598293- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGCTATTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTGTTGTGCAAACTTCGCGGCCGAGAG
ATGCCGTCGGTTACGAAGATAATTTGGCAAGTTTAATCCGCCCAGCGTAC
GATGACTATGTATTAGCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTCGAAAAAACTTACTTCACCTCATTTTATAACTCTCGCGTCA
ATCAACTTGAGAAATCTCTGGCAGACTCTGCAGACAACTACGGCTTCACA
ATTGCGTACATTTTCTTCGCTGATCAGTGGCCAACGACCGATGATTATAT
TGCGTCCGTCTGTCTAGTGTAA
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protein sequence of Gchil7723.t1

>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=424bp
MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLA
IAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPV
REFYNDFDAGAPRIPYFPSQSFIRTDSSIEKDPSDEEVVTEEAVPTGDCS
GGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQVDGSTQRRVKAVTQAE
AMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLC
SELAGLECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEAIFYYNRI
EIPLPLCTYTCPSDPLVRHTFVSKFVVQTSRPRDAVGYEDNLASLIRPAY
DDYVLALPNCEDTPTRNGGFEKTYFTSFYNSRVNQLEKSLADSADNYGFT
IAYIFFADQWPTTDDYIASVCLV*
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mRNA from alignment at tig00025321_pilon:597022..598293-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1272bp|location=Sequence derived from alignment at tig00025321_pilon:597022..598293- (Gracilaria chilensis NLEC103_M9 male)
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGCTATTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTGTTGTGCAAACTTCGCGGCCGAGAG
ATGCCGTCGGTTACGAAGATAATTTGGCAAGTTTAATCCGCCCAGCGTAC
GATGACTATGTATTAGCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTCGAAAAAACTTACTTCACCTCATTTTATAACTCTCGCGTCA
ATCAACTTGAGAAATCTCTGGCAGACTCTGCAGACAACTACGGCTTCACA
ATTGCGTACATTTTCTTCGCTGATCAGTGGCCAACGACCGATGATTATAT
TGCGTCCGTCTGTCTAGTGTAA
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Coding sequence (CDS) from alignment at tig00025321_pilon:597022..598293-

>Gchil7723.t1 ID=Gchil7723.t1|Name=Gchil7723.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1272bp|location=Sequence derived from alignment at tig00025321_pilon:597022..598293- (Gracilaria chilensis NLEC103_M9 male)
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGCTATTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTGTTGTGCAAACTTCGCGGCCGAGAG
ATGCCGTCGGTTACGAAGATAATTTGGCAAGTTTAATCCGCCCAGCGTAC
GATGACTATGTATTAGCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTCGAAAAAACTTACTTCACCTCATTTTATAACTCTCGCGTCA
ATCAACTTGAGAAATCTCTGGCAGACTCTGCAGACAACTACGGCTTCACA
ATTGCGTACATTTTCTTCGCTGATCAGTGGCCAACGACCGATGATTATAT
TGCGTCCGTCTGTCTAGTGTAA
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