Gchil7161.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7161.t1
Unique Name	Gchil7161.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	370

Homology

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BLAST of Gchil7161.t1 vs. uniprot
Match: A0A2V3IDR3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR3_9FLOR)

HSP 1 Score: 464 bits (1193), Expect = 1.220e-160
Identity = 237/363 (65.29%), Postives = 280/363 (77.13%), Query Frame = 0

Query:    9 LPSDTFLPPSTYDPLRHATQDFFWYHIEPYFHPVCSDQLAVLQPTNAPTPTLQLPTEQHSSSSRSTHHTLQP--ATLTSVAAFPLCHRLTAALLDDGKGQPVASKPLRSAVSAESTWLGPSPQMLDHYNCAMEQRIRHQLLHLGLLDNQQNDTLLSHLRLEHWRLQNLNSANAALQTRALTKVTPFLKSQASFRKQKITDNFTEIKYLETMGEKCGKRAKGRFNKLLNQMHPNRHLKPGDPINQPNKTTHNSAVTDKPISKKRKRKAPTVDKPPHKQQHVEKNASSSADSSDILAPHIASIIWKHNNHASIDDIVSDLVETVPNLTIDVKEARRRITKCLSFSRKPYRFRKTPNGLTYSAAKL 369
            LP  TFLP  TYDPLRH+ QD+FWYHIEPYFHP+C + LAVL+     TP LQLP      +  S H   Q   +T+ S+AAFPLCHRLTAALLD+GKG  VA+KP+RS++ AE TWLGPSPQ+L+ +   MEQR+R QLL LGLL+ QQND LL+ LRL+HW+LQNLN+AN   + +A+ KVTP LKSQA++RKQK+ DN  EI Y+ETM EKC KR   RFNKLLNQMHPNRHL+PGDPI+QP KTTHNS+V DK ISKKRKRKAP+ D P + Q+  E N++S  D SDILAPHIA IIWKH NHAS+D IVS  V+T+P+L  D KEARRRITKCLS SRK YRFR+T  GLTYSA KL
Sbjct:   17 LPPQTFLPRGTYDPLRHSAQDYFWYHIEPYFHPICVEDLAVLRHQTISTPRLQLPRSNSQQTDSSEHKPQQQHQSTINSIAAFPLCHRLTAALLDEGKGHTVAAKPVRSSLHAEDTWLGPSPQLLNQFTQIMEQRLRIQLLQLGLLETQQNDPLLTQLRLDHWKLQNLNAANTDAKDQAIVKVTPCLKSQANYRKQKMQDNLIEISYIETMAEKCAKR---RFNKLLNQMHPNRHLRPGDPIHQPTKTTHNSSVADKAISKKRKRKAPSSDHPANNQR--ENNSASHTDQSDILAPHIAHIIWKHGNHASVDQIVSTFVQTLPDLVNDPKEARRRITKCLSASRKSYRFRRTSTGLTYSATKL 374

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BLAST of Gchil7161.t1 vs. uniprot
Match: R7Q2L9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2L9_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 9.780e-31
Identity = 66/134 (49.25%), Postives = 94/134 (70.15%), Query Frame = 0

Query:  236 MHPNRHLKPGDPINQPNKTTHNSAVTDKPISKKRKRKAPTVDKPPHKQQHVEKNASSSADSSDILAPHIASIIWKHNNHASIDDIVSDLVETVPNLTIDVKEARRRITKCLSFSRKPYRFRKTPNGLTYSAAKL 369
            MHPNR+L PGDP+  P+K    +   DK ISKKRK+K  + D+  +  ++ E +A++ +D+ + LA  IA+IIWKHNN A  D+IV + VE  P L  D+KEARR+I  C++ SRKP+RFRK P+G+TYSA ++
Sbjct:    1 MHPNRNLLPGDPVQGPSKPGATN-FGDKSISKKRKKKHSSNDR--NALKNAEHHAATGSDAGEKLALQIANIIWKHNNQAPFDEIVKEYVEGNPQLAWDIKEARRKIHNCITCSRKPFRFRKLPDGMTYSATRV 131

The following BLAST results are available for this feature:

BLAST of Gchil7161.t1 vs. uniprot

BLAST of Gchil7161.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IDR3_9FLOR	1.220e-160	65.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q2L9_CHOCR	9.780e-31	49.25	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004441_pilon	contig	tig00004441_pilon:388827..390264 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7161.t1	Gchil7161.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004441_pilon 388827..390264 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7161.t1 ID=Gchil7161.t1|Name=Gchil7161.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=370bp
MKPARDFSLPSDTFLPPSTYDPLRHATQDFFWYHIEPYFHPVCSDQLAVL
QPTNAPTPTLQLPTEQHSSSSRSTHHTLQPATLTSVAAFPLCHRLTAALL
DDGKGQPVASKPLRSAVSAESTWLGPSPQMLDHYNCAMEQRIRHQLLHLG
LLDNQQNDTLLSHLRLEHWRLQNLNSANAALQTRALTKVTPFLKSQASFR
KQKITDNFTEIKYLETMGEKCGKRAKGRFNKLLNQMHPNRHLKPGDPINQ
PNKTTHNSAVTDKPISKKRKRKAPTVDKPPHKQQHVEKNASSSADSSDIL
APHIASIIWKHNNHASIDDIVSDLVETVPNLTIDVKEARRRITKCLSFSR
KPYRFRKTPNGLTYSAAKL*