Gchil7204.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7204.t1
Unique NameGchil7204.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length197
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:527766..528356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7204Gchil7204Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 527766..528356 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7204.t1.stop1Gchil7204.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 527766..527768 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7204.t1.CDS1Gchil7204.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 527766..528356 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7204.t1.exon1Gchil7204.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 527766..528356 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7204.t1.start1Gchil7204.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 528354..528356 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7204.t1Gchil7204.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 527766..528356 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=197bp
MRRTTAASVRCKQESGKANASELEGEIREMLKHSLPATPVDKKELQESDR
RVLDGITESGATKMNEIVKNMNDELNEIQDGASQRATEMIQKETDILLEK
YEQKRVDILEQVKTDRQVIQKEISNLEGLETEMKRDQGQKPISEKFLFAS
TMAFTIGALFYAWNGLVNSDASALSNAAVDASVAAVAGYFISRRRT*
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spliced messenger RNA

>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=591bp|location=Sequence derived from alignment at tig00004441_pilon:527766..528356- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGACGCACCACTGCTGCTTCGGTGCGATGTAAGCAAGAAAGCGGGAA
AGCAAATGCTTCGGAATTGGAAGGAGAAATCCGAGAGATGCTCAAACATT
CGTTGCCAGCAACTCCTGTCGATAAAAAGGAACTACAAGAATCGGATCGG
CGAGTACTGGACGGTATAACCGAGAGCGGAGCTACAAAGATGAATGAAAT
AGTGAAGAACATGAACGATGAATTGAATGAAATACAAGACGGTGCCAGCC
AACGAGCTACAGAAATGATACAAAAAGAAACAGATATACTACTAGAAAAG
TATGAGCAAAAGAGGGTTGACATTCTTGAGCAGGTTAAGACAGACCGCCA
AGTTATACAAAAAGAAATATCTAACCTTGAAGGTTTAGAAACAGAAATGA
AAAGAGACCAAGGCCAGAAGCCAATTTCGGAAAAGTTTCTCTTCGCCTCC
ACGATGGCTTTCACTATTGGTGCTCTCTTTTATGCCTGGAATGGCCTCGT
AAACTCTGATGCTTCCGCGCTATCCAACGCCGCTGTGGATGCATCGGTTG
CTGCCGTTGCAGGGTACTTCATATCTCGTAGACGGACTTAA
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protein sequence of Gchil7204.t1

>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=197bp
MRRTTAASVRCKQESGKANASELEGEIREMLKHSLPATPVDKKELQESDR
RVLDGITESGATKMNEIVKNMNDELNEIQDGASQRATEMIQKETDILLEK
YEQKRVDILEQVKTDRQVIQKEISNLEGLETEMKRDQGQKPISEKFLFAS
TMAFTIGALFYAWNGLVNSDASALSNAAVDASVAAVAGYFISRRRT*
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mRNA from alignment at tig00004441_pilon:527766..528356-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=591bp|location=Sequence derived from alignment at tig00004441_pilon:527766..528356- (Gracilaria chilensis NLEC103_M9 male)
ATGAGACGCACCACTGCTGCTTCGGTGCGATGTAAGCAAGAAAGCGGGAA
AGCAAATGCTTCGGAATTGGAAGGAGAAATCCGAGAGATGCTCAAACATT
CGTTGCCAGCAACTCCTGTCGATAAAAAGGAACTACAAGAATCGGATCGG
CGAGTACTGGACGGTATAACCGAGAGCGGAGCTACAAAGATGAATGAAAT
AGTGAAGAACATGAACGATGAATTGAATGAAATACAAGACGGTGCCAGCC
AACGAGCTACAGAAATGATACAAAAAGAAACAGATATACTACTAGAAAAG
TATGAGCAAAAGAGGGTTGACATTCTTGAGCAGGTTAAGACAGACCGCCA
AGTTATACAAAAAGAAATATCTAACCTTGAAGGTTTAGAAACAGAAATGA
AAAGAGACCAAGGCCAGAAGCCAATTTCGGAAAAGTTTCTCTTCGCCTCC
ACGATGGCTTTCACTATTGGTGCTCTCTTTTATGCCTGGAATGGCCTCGT
AAACTCTGATGCTTCCGCGCTATCCAACGCCGCTGTGGATGCATCGGTTG
CTGCCGTTGCAGGGTACTTCATATCTCGTAGACGGACTTAA
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Coding sequence (CDS) from alignment at tig00004441_pilon:527766..528356-

>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=591bp|location=Sequence derived from alignment at tig00004441_pilon:527766..528356- (Gracilaria chilensis NLEC103_M9 male)
ATGAGACGCACCACTGCTGCTTCGGTGCGATGTAAGCAAGAAAGCGGGAA
AGCAAATGCTTCGGAATTGGAAGGAGAAATCCGAGAGATGCTCAAACATT
CGTTGCCAGCAACTCCTGTCGATAAAAAGGAACTACAAGAATCGGATCGG
CGAGTACTGGACGGTATAACCGAGAGCGGAGCTACAAAGATGAATGAAAT
AGTGAAGAACATGAACGATGAATTGAATGAAATACAAGACGGTGCCAGCC
AACGAGCTACAGAAATGATACAAAAAGAAACAGATATACTACTAGAAAAG
TATGAGCAAAAGAGGGTTGACATTCTTGAGCAGGTTAAGACAGACCGCCA
AGTTATACAAAAAGAAATATCTAACCTTGAAGGTTTAGAAACAGAAATGA
AAAGAGACCAAGGCCAGAAGCCAATTTCGGAAAAGTTTCTCTTCGCCTCC
ACGATGGCTTTCACTATTGGTGCTCTCTTTTATGCCTGGAATGGCCTCGT
AAACTCTGATGCTTCCGCGCTATCCAACGCCGCTGTGGATGCATCGGTTG
CTGCCGTTGCAGGGTACTTCATATCTCGTAGACGGACTTAA
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