Gchil7204.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7204.t1
Unique Name	Gchil7204.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	197

Homology

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BLAST of Gchil7204.t1 vs. uniprot
Match: A0A2V3IXM3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM3_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 2.820e-54
Identity = 98/196 (50.00%), Postives = 143/196 (72.96%), Query Frame = 0

Query:    2 RRTTAASVRCKQESGKANASELEGEIREMLKHSLPATPVDKKELQESDRRVLDGITESGATKMNEIVKNMNDELNEIQDGASQRATEMIQKETDILLEKYEQKRVDILEQVKTDRQVIQKEISNLEGLETEM--KRDQGQKPISEKFLFASTMAFTIGALFYAWNGLVNSDASALSNAAVDASVAAVAGYFISRRR 195
            RR    +++CKQ +G+ +AS+L+GE+R++   S+   P+D+ EL++SDRRV++GITE+G ++MNEIV +M D L  ++D A  RAT MIQ+ETD LL KYE +R D+L +VK DR+VIQ+E + +E L   M  +R+   + +  K L  ST AF + AL+YAWNG VN+D +AL+NAAVDA VAA AGYF+S+++
Sbjct:   17 RRAKIVTLQCKQTNGE-DASQLDGELRDLFDRSIRDVPIDENELRKSDRRVMEGITETGVSRMNEIVSDMKDSLKGVEDDAINRATAMIQEETDALLSKYEDQRSDLLNKVKMDRKVIQEEFTKIEQLAGNMEERREGDGQSLKTKALLVSTTAFVLAALYYAWNGFVNTDPAALTNAAVDAVVAAAAGYFLSKQQ 211

The following BLAST results are available for this feature:

BLAST of Gchil7204.t1 vs. uniprot

BLAST of Gchil7204.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXM3_9FLOR	2.820e-54	50.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 168..172
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 192..196
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..167
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 173..191
None	No IPR available	TMHMM	TMhelix		coord: 173..192
None	No IPR available	TMHMM	TMhelix		coord: 146..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004441_pilon	contig	tig00004441_pilon:527766..528356 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7204.t1	Gchil7204.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004441_pilon 527766..528356 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7204.t1 ID=Gchil7204.t1|Name=Gchil7204.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=197bp
MRRTTAASVRCKQESGKANASELEGEIREMLKHSLPATPVDKKELQESDR
RVLDGITESGATKMNEIVKNMNDELNEIQDGASQRATEMIQKETDILLEK
YEQKRVDILEQVKTDRQVIQKEISNLEGLETEMKRDQGQKPISEKFLFAS
TMAFTIGALFYAWNGLVNSDASALSNAAVDASVAAVAGYFISRRRT*