Gchil7154.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7154.t1
Unique NameGchil7154.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length539
Homology
BLAST of Gchil7154.t1 vs. uniprot
Match: A0A2V3INC8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INC8_9FLOR)

HSP 1 Score: 323 bits (827), Expect = 1.380e-100
Identity = 232/547 (42.41%), Postives = 328/547 (59.96%), Query Frame = 0
Query:    5 PIFAIGGFGGVTLAVTVLIVRRIARKPRKKCEPSQQLITAAKLDNFSTIGDLV-KTENFLHSCSSNRLICTSTIKTPEAT---DSISARSAAIIESHQVTASVSLLPKSISTLSSVTYDSKVCVDTYAALLTNDDDDEDGAFDDAKTCTDDLESEAKNRMRDIPAEHEE----IAVPSPTALLLIDNSRSDGDTESGTESGTPLVHGEYEQNDEQLLQPRSPILRQQTSPVQFEREASEAVSSEPSYFNNSMYDLDYEAEID--VRMEPENSGVPSIFTENATVSHGVGDNTQYYR--SAVLIFSPPRKS--YGAPVSVTAAPLASVPALEDVVTGTPIPATEIRIDTELLDTTNESQQEQDANEPSISNEQESMDXXXXXXDEESNYIQDTFMNDLPTILREGELDENESNDVQRDCNNTQIVSVPRFRQPVSDSHGPILPIVSREKSTLSSPERTDFGSPAATRPLREKDVEQVRAMTNIDAIEDSEKENAFQSTSTSPERLSRKPWRSDRLNNVFSRKNSVRRLRIPERIRRRQLRPQKQNTKS 537
            P+F IGG GG  +A+T +++R++AR  + K    +Q+I         +  D+  +TEN L +C++   +C + ++  E T   D+ SARS A+IESH VT S   +PKSIS LSS+T+DSKVCVD YA+LL N+   ED   DDA T TD+  S   +       +HEE         PT   L++N   + DT SGT      V G YEQN E LL+P+SP++RQ T     ERE S + +S  S   ++  + DY+A+ D    +      VPS+F ++A +S  +G + +  R  SAV+I +   ++      VS TAAPLASVPALEDVV+G PIP+TEI +  ++ +   E+        P + ++ ES D      +EE +  Q  FM +L T   E E +   S+D+ R  +N+   S     + + + + PI+P V+RE+S L+S E  +   PAATRPLRE+DVE+++A+ N    EDS+KENAFQS STSPERLSRKPWRS+R+++VFSRKNSVRRLRIP+RIRRR +  QK NT S
Sbjct:    3 PVFIIGGVGGFGIAITAVVLRQLARGRKAKRSKPKQVIEYQSTGCCLSRRDIYSETENLLETCNT---VCPACVQKTEPTLSMDAASARSGAVIESHPVTTSSPFIPKSISRLSSMTFDSKVCVDAYASLLANEGFHED-VSDDAGTITDESGSRDGSEEHRATVQHEEGPRVDMETEPTTESLVENMSGEADTHSGTH----WVQGNYEQNSEFLLEPKSPVIRQPTPIRVPEREISVSQNSSSSPTLHAPLEFDYDADDDGGTGVNGAEVPVPSLFLQDAIISSEMGHSPEPQREGSAVIISTSSARTGRERTIVSFTAAPLASVPALEDVVSGNPIPSTEILVHEDVPNAVTEATNGHAHGIP-LPSDHESNDRDLVSLEEEQSLPQIPFMRNLSTSPEEQETNSQVSSDLSR--HNSDAQSEVSLFKVICNKNTPIIPTVTRERSELASTEGIEADGPAATRPLREEDVERMKALANPPRAEDSDKENAFQSASTSPERLSRKPWRSERISSVFSRKNSVRRLRIPDRIRRRNMLTQKNNTTS 538          
The following BLAST results are available for this feature:
BLAST of Gchil7154.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INC8_9FLOR1.380e-10042.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..460
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..538
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:378724..380340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7154.t1Gchil7154.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 378724..380340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7154.t1 ID=Gchil7154.t1|Name=Gchil7154.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=539bp
MPLPPIFAIGGFGGVTLAVTVLIVRRIARKPRKKCEPSQQLITAAKLDNF
STIGDLVKTENFLHSCSSNRLICTSTIKTPEATDSISARSAAIIESHQVT
ASVSLLPKSISTLSSVTYDSKVCVDTYAALLTNDDDDEDGAFDDAKTCTD
DLESEAKNRMRDIPAEHEEIAVPSPTALLLIDNSRSDGDTESGTESGTPL
VHGEYEQNDEQLLQPRSPILRQQTSPVQFEREASEAVSSEPSYFNNSMYD
LDYEAEIDVRMEPENSGVPSIFTENATVSHGVGDNTQYYRSAVLIFSPPR
KSYGAPVSVTAAPLASVPALEDVVTGTPIPATEIRIDTELLDTTNESQQE
QDANEPSISNEQESMDDDSTTTDEESNYIQDTFMNDLPTILREGELDENE
SNDVQRDCNNTQIVSVPRFRQPVSDSHGPILPIVSREKSTLSSPERTDFG
SPAATRPLREKDVEQVRAMTNIDAIEDSEKENAFQSTSTSPERLSRKPWR
SDRLNNVFSRKNSVRRLRIPERIRRRQLRPQKQNTKSL*
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