Gchil7228.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7228.t1
Unique NameGchil7228.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length170
Homology
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A2V3INA1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA1_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 2.240e-53
Identity = 96/170 (56.47%), Postives = 123/170 (72.35%), Query Frame = 0
Query:    1 MDFENATQAVSTAIRSIFERWTALKLVIEHQMGGVTDDATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQMHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQHDHDDDKLSL-PSPTAEKPMMDDDGFTEVRRGGGHR 169
            M FE+A QAVSTAIRSIF+RWTALKLVIEHQMGG  D A +LM+  ++MAT+P + HDEDDFIDLFY+AF++M  D+EDGS EEIA+ +VR+RDAA  GDY PA +   K  + S+ A  +S+ GGEA V    H+ + +K    P    ++ + DDDGFTEV+ GG HR
Sbjct:    1 MQFESAQQAVSTAIRSIFDRWTALKLVIEHQMGGNPDPAIELMNIAVAMATNPSERHDEDDFIDLFYEAFNRMQADIEDGSPEEIAALVVRIRDAAARGDYTPASEASLK-EQPSSQAFHRSVSGGEAVV----HECEREKTPCRPPQPRQESIADDDGFTEVKSGGRHR 165          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A5J4Z174_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z174_PORPP)

HSP 1 Score: 81.3 bits (199), Expect = 4.130e-16
Identity = 52/177 (29.38%), Postives = 96/177 (54.24%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTDDAT--KLMDTTISMATSPLKCHDEDDFIDLFYDAFDQMHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQH--------DHDDDKLSLPS------PTAEKPM---MDDDGFTEVR 163
            A + +   + ++F RWTAL++ ++ +  G   ++    +++TT  +++      +++  + +FYDAFD+M+CD+EDGS E++AS + ++RD   +G +A    LV+KA +  +A   Q++       DND           + D   S+PS      PT  +P    +D+DGFT V+
Sbjct:    8 AHRQLKRGLSALFARWTALQIALQERFAGSQTESIVQDMIETTYQLSSGSRL--NQEKLVSMFYDAFDRMNCDLEDGSAEDMASAVAQLRDECHHGRFAYVDDLVAKAQRDRSAILSQNV--RSVLEDNDDEXXXXTVGGQNGDSASSVPSMMETDSPTPSRPAAPEVDEDGFTLVK 180          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A0E0LWQ2_ORYPU (Uncharacterized protein n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0LWQ2_ORYPU)

HSP 1 Score: 68.2 bits (165), Expect = 6.430e-11
Identity = 54/182 (29.67%), Postives = 91/182 (50.00%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQS----IDGGE-----------AFVDNDQHDHDDDKLSLPSPTAEKPMMDDDGFTEV--RRGGG 167
            A  A+   I  +F RWTAL++ +E+Q GG      A +L ++ +S   +    H  +D +D+ YD   +  + D EDGS+EE+A Q++ + +     +Y+   +L  + ++A   A  QS    +DG             + VDN+    +  K+++  P   KP+ D DG+T V  RRG G
Sbjct:   36 AAAALGEGIGLVFARWTALQMAVENQWGGRDSRAKADQLAESILSWFANSKGKHYYEDLVDMMYDTVSESFNADFEDGSVEEVAEQLLIMHEECLQSNYSSVEKL--RNSRAQGNAVSQSRKMVVDGDXXXXXXXXXXEPSMVDNEAGSAE--KMAVDEPKPSKPVPDADGWTVVPPRRGRG 213          
BLAST of Gchil7228.t1 vs. uniprot
Match: Q6YVT3_ORYSJ (Os08g0508600 protein n=9 Tax=Oryza TaxID=4527 RepID=Q6YVT3_ORYSJ)

HSP 1 Score: 66.2 bits (160), Expect = 2.590e-10
Identity = 55/185 (29.73%), Postives = 93/185 (50.27%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQS----IDG-------------GE-AFVDNDQHDHDDDKLSLPSPTAEKPMMDDDGFTEV--RRGGG 167
            A  A+   I  +F RWTAL++ +E+Q GG      A +L ++ +S   +    H  +D +D+ YD   +  + D EDGS+EE+A Q++ + +     +Y+   +L  + ++A   A  QS    +DG             GE + +DN+    +  K+++  P   KP+ D DG+T V  RRG G
Sbjct:   16 AAAALGEGIGLVFGRWTALQMAVENQWGGRDSRAKADQLAESILSWFANSKGKHYYEDLVDMMYDTVSKSFNADFEDGSVEEVAEQLLIMHEECLQSNYSSVEKL--RNSRAQGNAVSQSRKMVVDGDXXXXXXXXXXXXGEPSMMDNEAGSAE--KMAVDEPKPSKPVPDADGWTTVPPRRGRG 196          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A0A9GGV2_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9GGV2_ARUDO)

HSP 1 Score: 59.7 bits (143), Expect = 6.730e-8
Identity = 48/177 (27.12%), Postives = 78/177 (44.07%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQHDHDD----------DKLSLPSPTAEKPMMDDDGFTEV--RRGGG 167
            A  A+   I  +F RWTAL++  E+Q GG      A +L  + +S        H  +D +D+ YD   +  + D EDGS+EE+A Q++ + +     +Y+   +L +   K +  +  + I                          DK+++  P   KP  D DG+T V  RRG G
Sbjct:   17 AGAALGEGIGLVFGRWTALQMAAENQWGGRDSRAKADQLGTSVLSWFCHSKGPHYYEDLVDMMYDTISESFNADFEDGSIEEVAEQLLIMHEECLQSNYSTIEKLRNSHAKGNAVSQSRQIAADXXXXXXXXXXXXXXXXXXXAAAGDKMAVDKPKPSKPAPDTDGWTVVPPRRGRG 193          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A5J9WAR7_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WAR7_9POAL)

HSP 1 Score: 59.7 bits (143), Expect = 6.730e-8
Identity = 46/174 (26.44%), Postives = 80/174 (45.98%), Query Frame = 0
Query:    9 AVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQHDHD----------DDKLSLPSPTAEKPMMDDDGFTEV--RRGGG 167
            A+S  +  +FERWTAL++ +E+Q GG      A +L  + +S        H  +D +D+ YD   +  + D EDGS+EE+A Q++ + +  +  +Y+   +L +     +  +  + I   E                       ++++  P   KP  D DG+T V  RRG G
Sbjct:   20 ALSEGVGLVFERWTALQMAVENQWGGRDSRAKADQLGASILSWFCHSKGPHYFEDLVDMMYDTISESFNADFEDGSVEEVAEQLLIMHEECQQRNYSSIEKLRNSRVPGNAVSQSRQIAADEDXXXXXXXXXXXXXXXXXXATQQQMAVDKPKPSKPAPDADGWTTVLSRRGRG 193          
BLAST of Gchil7228.t1 vs. uniprot
Match: I1IHZ1_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IHZ1_BRADI)

HSP 1 Score: 59.3 bits (142), Expect = 8.960e-8
Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFD-QMHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVS---KANKASTAAPLQS--------IDGGEAFVDNDQHDHDDDKLSLPSPTAEKPMMDDDGFTEV 162
            A  A+   IR +F RWTAL++ +EHQ  G      A +L ++ +S   +    +  DD  ++ Y A     + D  DGS+EE+A QI+ + +    G+Y+   +L +   + N  S +  + +          G  +   N+    D+  +  P P+  KP+ D DGFT V
Sbjct:   15 AAAALQEGIRLVFGRWTALQIAVEHQQAGRDSRAKADQLAESILSWFCNSKGPYYYDDLDNMIYGAISGTFNSDFVDGSIEEVAEQILIMHEGCLQGNYSSIEKLRNTHVQGNAVSLSRQMVTDXXXXXXXXXGEPSMAGNEAVRPDEMVVDEPKPS--KPVPDADGFTPV 183          
BLAST of Gchil7228.t1 vs. uniprot
Match: I1QK07_ORYGL (Uncharacterized protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1QK07_ORYGL)

HSP 1 Score: 56.2 bits (134), Expect = 5.210e-7
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQL 107
            A  A+   I  +F RWTAL++ +E+Q GG      A +L ++ +S   +    H  +D +D+ YD   +  + D EDGS+EE+A Q++ + +     +Y+   +L
Sbjct:   16 AAAALGEGIGLVFGRWTALQMAVENQWGGRDSRAKADQLAESILSWFANSKGKHYYEDLVDMMYDTVSESFNADFEDGSVEEVAEQLLIMHEECLQSNYSSVEKL 120          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A3B6IJ65_WHEAT (Uncharacterized protein n=11 Tax=Triticeae TaxID=147389 RepID=A0A3B6IJ65_WHEAT)

HSP 1 Score: 55.8 bits (133), Expect = 1.690e-6
Identity = 44/174 (25.29%), Postives = 83/174 (47.70%), Query Frame = 0
Query:    6 ATQAVSTAIRSIFERWTALKLVIEHQMGGVTD--DATKLMDTTISMATSPLKCHDEDDFIDLFYDAFDQ-MHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVS---KANKASTAAPLQSIDGGEAFVDNDQHDHDD-----DKLSLPSPTAEKPMMDDDGFTEV--RRGG 166
            A  A+   +  +F RWTAL++ +E+  GG      A +L    ++  T+    +  DD  ++ +D+  +  + D EDGS+ E+A Q++ + +     +Y+   +L +   + N  S +  + + +G ++          D     D +S+  P   KP  D DG+T V  +RGG
Sbjct:   15 AAAALQEGVGLVFMRWTALQMAVENGWGGRDSRAKADRLAADVLAFFTTSKGPYYYDDLEEMMFDSISESFNADFEDGSVGEVAEQVLIMHEECLQNNYSSIEKLRNTRAQGNAVSQSRMMVTDEGDDSXXXXXXXXXGDEPASADDMSVDEPKPPKPAPDADGWTVVPPKRGG 188          
BLAST of Gchil7228.t1 vs. uniprot
Match: A0A6P5F6D0_ANACO (pre-rRNA-processing protein TSR2 homolog n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F6D0_ANACO)

HSP 1 Score: 55.5 bits (132), Expect = 2.610e-6
Identity = 45/175 (25.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   14 IRSIFERWTALKLVIEHQMGGVTDDATKLMDTTISMATSPLKCHDE---DDFIDLFYDAFD-QMHCDVEDGSLEEIASQIVRVRDAAKNGDYAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQHDHDDDKLS-------------LPSPTAEKPMMDDDGFTEV--RRGGGHR 169
            I  +  RWTAL++ IE++ GG  D   K  D   S+ +  L+  D    DD  +L  ++     + ++EDGS+EE+A Q++ + + +  G+Y    + + K  +  T   + ++      +D+++ +  D+++S             +  P   KP+ D+DG++ V  RR  G R
Sbjct:   32 ISLVLSRWTALQVAIENEWGG-RDSCAKADDLAASILSWFLQSKDPLYIDDLENLIDESMVLSFNSEIEDGSVEEVAEQLMVMHEDSLKGNY----ESIEKLRR--TGTQVNAVSRSRRVIDDNEDESSDEEVSKMMVDETKPKEMVVNEPKPSKPIPDEDGWSVVAQRRNRGKR 199          
The following BLAST results are available for this feature:
BLAST of Gchil7228.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3INA1_9FLOR2.240e-5356.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z174_PORPP4.130e-1629.38Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A0E0LWQ2_ORYPU6.430e-1129.67Uncharacterized protein n=2 Tax=Oryzinae TaxID=164... [more]
Q6YVT3_ORYSJ2.590e-1029.73Os08g0508600 protein n=9 Tax=Oryza TaxID=4527 RepI... [more]
A0A0A9GGV2_ARUDO6.730e-827.12Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A5J9WAR7_9POAL6.730e-826.44Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
I1IHZ1_BRADI8.960e-828.07Uncharacterized protein n=2 Tax=Brachypodium dista... [more]
I1QK07_ORYGL5.210e-730.48Uncharacterized protein n=1 Tax=Oryza glaberrima T... [more]
A0A3B6IJ65_WHEAT1.690e-625.29Uncharacterized protein n=11 Tax=Triticeae TaxID=1... [more]
A0A6P5F6D0_ANACO2.610e-625.71pre-rRNA-processing protein TSR2 homolog n=3 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019398Pre-rRNA-processing protein TSR2PFAMPF10273WGGcoord: 12..86
e-value: 3.9E-8
score: 33.7
IPR019398Pre-rRNA-processing protein TSR2PANTHERPTHR21250UNCHARACTERIZEDcoord: 5..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..145
NoneNo IPR availablePANTHERPTHR21250:SF0PRE-RRNA-PROCESSING PROTEIN TSR2 HOMOLOGcoord: 5..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:794954..795463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7228.t1Gchil7228.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 794954..795463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7228.t1 ID=Gchil7228.t1|Name=Gchil7228.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=170bp
MDFENATQAVSTAIRSIFERWTALKLVIEHQMGGVTDDATKLMDTTISMA
TSPLKCHDEDDFIDLFYDAFDQMHCDVEDGSLEEIASQIVRVRDAAKNGD
YAPAVQLVSKANKASTAAPLQSIDGGEAFVDNDQHDHDDDKLSLPSPTAE
KPMMDDDGFTEVRRGGGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019398Pre-rRNA_process_TSR2