Gchil7101.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7101.t1
Unique Name	Gchil7101.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	168

Homology

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A2V3IXT2_9FLOR (Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXT2_9FLOR)

HSP 1 Score: 240 bits (613), Expect = 8.700e-79
Identity = 107/138 (77.54%), Postives = 124/138 (89.86%), Query Frame = 0

Query:   30 EPSSRRRDGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            E   ++RDGS PSR GAKTYQV +EDP  G+VH Y+VPEDRY+WHS+TDQGAD+PASCRNGCCTTCAVK+++G+VQQ++ALGLLK+MRAKGYALLCVSY  SDI CVLQ KDEVY+KQFGSSFE GGVEWGGF+PEDD
Sbjct:   40 ETRIKKRDGSFPSRPGAKTYQVKIEDPRKGIVHTYTVPEDRYIWHSITDQGADLPASCRNGCCTTCAVKMSTGEVQQEEALGLLKDMRAKGYALLCVSYARSDIDCVLQGKDEVYVKQFGSSFESGGVEWGGFVPEDD 177

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BLAST of Gchil7101.t1 vs. uniprot
Match: R7QMK8_CHOCR (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMK8_CHOCR)

HSP 1 Score: 217 bits (553), Expect = 9.620e-69
Identity = 103/155 (66.45%), Postives = 121/155 (78.06%), Query Frame = 0

Query:   17 SYHKKDAFVKSSIEPSS----RRRDGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            ++ +KDA  + +   ++    ++RDGSLP    AKT+ VTV DP N  V KY VPEDRYVWH M+DQ ADIP+SC NGCCTTCAVKITSG+V Q +ALGLLK MR + YALLCVSYP SDI CVLQD+DEVY+KQFGSSFE GGVEWGG +PEDD
Sbjct:   88 TFRRKDALSRRTPPIATPIQMKKRDGSLPGNPNAKTHTVTVHDPKNDRVLKYQVPEDRYVWHGMSDQDADIPSSCLNGCCTTCAVKITSGEVDQSEALGLLKEMRDQDYALLCVSYPKSDIECVLQDEDEVYVKQFGSSFESGGVEWGGVVPEDD 242

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A7S1TD70_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD70_9RHOD)

HSP 1 Score: 200 bits (509), Expect = 3.670e-63
Identity = 89/133 (66.92%), Postives = 109/133 (81.95%), Query Frame = 0

Query:   35 RRDGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            RRDG+LPS+ GAK + VTV DP   VV++  VPEDRY+W  M +QG DIPASCRNGCCTTCA ++TSG+V QD+ALGLLK ++A+GYALLCVSYP SD+   LQD DEVY +QFG +FE GGVEWGGF+PE++
Sbjct:   31 RRDGALPSKPGAKRFHVTVRDPAKNVVYETQVPEDRYIWWEMEEQGFDIPASCRNGCCTTCAGRVTSGEVSQDEALGLLKEIKAQGYALLCVSYPRSDVEVTLQDIDEVYCRQFGDTFEQGGVEWGGFLPEEE 163

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A7S1ER34_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER34_9RHOD)

HSP 1 Score: 186 bits (473), Expect = 1.320e-57
Identity = 89/157 (56.69%), Postives = 114/157 (72.61%), Query Frame = 0

Query:   11 SHFCPHSYHKKDAFVKSSIEPSSRRRDGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            S+ C  S+ + +A   S+I+   +RR G+LP    AK Y+VT++DP   V H   VP DRY+WHSM +QG DIPASCR+GCCTTCAV+I  G V Q++ALGL+K +R +GYALLCVSYP SD+   LQD DEVY+KQFG+SFE GG EWGG   ++D
Sbjct:   16 SNICA-SHTQMNAGSASNIK--RQRRHGNLPGDVNAKKYKVTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPASCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFESGGKEWGGVFLDED 169

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A5J4YT31_PORPP (Ferredoxin-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT31_PORPP)

HSP 1 Score: 179 bits (455), Expect = 1.780e-54
Identity = 82/122 (67.21%), Postives = 95/122 (77.87%), Query Frame = 0

Query:   46 AKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            A+ Y VTV DP     +   VPEDRY+WH+M +QG DIPASCR+GCCTTCAV+I SG VQQDQALGLL+ MR +GYALLCVSYP SDI   LQD+DEVYIKQFG +FE GG EWGG   ++D
Sbjct:   77 ARRYNVTVHDPKKNATYSVQVPEDRYIWHAMEEQGYDIPASCRHGCCTTCAVRIESGAVQQDQALGLLREMRDQGYALLCVSYPKSDIVATLQDEDEVYIKQFGGTFEQGGKEWGGVFLDED 198

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A1X6NNM8_PORUM (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNM8_PORUM)

HSP 1 Score: 170 bits (430), Expect = 2.710e-50
Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 0

Query:   37 DGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTD-QGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGG 161
            DGSLP    A T+ VTV D    VV   +VPEDRY+WH+M +  G  +P+SCR+GCCTTCAV++TSG+V Q +ALGLL+ MR  GYALLCVS P SDI CVLQ++DEVY+KQFG +FE GGVEWGG
Sbjct:   53 DGSLPGSPDAPTHTVTVLDGAGAVVQTLAVPEDRYIWHAMEEASGGRLPSSCRHGCCTTCAVRVTSGEVDQREALGLLRQMREVGYALLCVSKPRSDITCVLQEEDEVYVKQFGDTFEQGGVEWGG 178

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A7S1ER81_9RHOD (Ferredoxin n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER81_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 4.550e-49
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0

Query:   46 AKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGG 156
            AK Y+VT++DP   V H   VP DRY+WHSM +QG DIPASCR+GCCTTCAV+I  G V Q++ALGL+K +R +GYALLCVSYP SD+   LQD DEVY+KQFG+SFE GG
Sbjct:    4 AKKYKVTIKDPAKNVTHSVEVPVDRYIWHSMEEQGYDIPASCRHGCCTTCAVRIEQGSVDQEEALGLMKALREQGYALLCVSYPESDLVATLQDADEVYVKQFGNSFEAGG 114

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.460e-47
Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 0

Query:   26 KSSIEPSSRRRDGSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPA-----SCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            K + +P      G  P +  AK Y+VTV DP     +   VPEDRY++ +  D G D+P       CRNGCCTTCAVK+  G+V+ + ALGLL++M+ KGYAL C S P SDI C LQD+DEVY++Q+G +FE GGVEWGGF+PEDD
Sbjct:   71 KRNGQPLEPGVGGIWPGKPDAKKYKVTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGGFLPEDD 217

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BLAST of Gchil7101.t1 vs. uniprot
Match: M2VXX0_GALSU (Ferredoxin n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXX0_GALSU)

HSP 1 Score: 159 bits (403), Expect = 9.090e-47
Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 0

Query:   46 AKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMPEDD 167
            A+ Y+VTV +   G  +   VP DRY+W S  +QG ++P+SC NGCCTTCA ++ SG+++Q  ALGLLK M+ K YALLCVSYP SD+  VLQ++DEVY +QFG SFE GGVE+GG +PEDD
Sbjct:   64 ARKYRVTVRNQRTGECYIRDVPTDRYIWWSFLEQGIELPSSCVNGCCTTCACRVVSGRIEQPLALGLLKEMKNKRYALLCVSYPKSDVEVVLQEEDEVYCRQFGDSFESGGVEYGGIIPEDD 185

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BLAST of Gchil7101.t1 vs. uniprot
Match: A0A7S0BU01_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BU01_9RHOD)

HSP 1 Score: 158 bits (400), Expect = 2.290e-46
Identity = 76/132 (57.58%), Postives = 95/132 (71.97%), Query Frame = 0

Query:   38 GSLPSRQGAKTYQVTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKITSGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGSSFEGGGVEWGGFMP--EDD 167
            G+LP    AKT++V V D   G V+   VPEDRY+ + + +QG ++PA CRNGCCTTCAVK+ SG+V Q +ALGLLK M+ +GYAL+CVSYP SDI    QD+DEVY+KQFG SFE GGV  G  +   EDD
Sbjct:   50 GALPGDPNAKTWKVKVLDSKTGDVYTADVPEDRYILYYLAEQGMEMPAQCRNGCCTTCAVKLQSGEVHQPEALGLLKEMKDEGYALMCVSYPRSDIEATTQDEDEVYVKQFGESFESGGVVPGAVLDAIEDD 181

The following BLAST results are available for this feature:

BLAST of Gchil7101.t1 vs. uniprot

BLAST of Gchil7101.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IXT2_9FLOR	8.700e-79	77.54	Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=4...	[more]
R7QMK8_CHOCR	9.620e-69	66.45	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S1TD70_9RHOD	3.670e-63	66.92	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]
A0A7S1ER34_9RHOD	1.320e-57	56.69	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]
A0A5J4YT31_PORPP	1.780e-54	67.21	Ferredoxin-1 n=1 Tax=Porphyridium purpureum TaxID=...	[more]
A0A1X6NNM8_PORUM	2.710e-50	63.49	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S1ER81_9RHOD	4.550e-49	65.77	Ferredoxin n=1 Tax=Timspurckia oligopyrenoides Tax...	[more]
A0A4D9CSH6_9STRA	1.460e-47	52.38	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
M2VXX0_GALSU	9.090e-47	58.20	Ferredoxin n=1 Tax=Galdieria sulphuraria TaxID=130...	[more]
A0A7S0BU01_9RHOD	2.290e-46	57.58	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 59..129 e-value: 2.3E-13 score: 49.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 49..143 score: 9.709864
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 51..133 e-value: 1.84502E-18 score: 73.5832
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 46..151 e-value: 9.9E-24 score: 84.9
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 22..149
None	No IPR available	PANTHER	PTHR43112:SF10	FERREDOXIN C 2, CHLOROPLASTIC	coord: 22..149
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 45..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004441_pilon	contig	tig00004441_pilon:134995..135796 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7101.t1	Gchil7101.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004441_pilon 134995..135796 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7101.t1 ID=Gchil7101.t1|Name=Gchil7101.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=168bp
MTLSTSPQCISHFCPHSYHKKDAFVKSSIEPSSRRRDGSLPSRQGAKTYQ
VTVEDPHNGVVHKYSVPEDRYVWHSMTDQGADIPASCRNGCCTTCAVKIT
SGQVQQDQALGLLKNMRAKGYALLCVSYPMSDIHCVLQDKDEVYIKQFGS
SFEGGGVEWGGFMPEDD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf