Gchil7162.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7162.t1
Unique NameGchil7162.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length428
Homology
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A2V3IDX6_9FLOR (Splicing factor U2AF 65 kDa subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX6_9FLOR)

HSP 1 Score: 487 bits (1254), Expect = 5.570e-168
Identity = 284/445 (63.82%), Postives = 323/445 (72.58%), Query Frame = 0
Query:    1 MHAASPPRSSARSRRTGGSSHESDRKRARVERLSPNAVPRRSPSHRDRAWERGDGYGSYSNP----SHPRRASHENALQNGSPYGARPAPPALSMQPPLPNTSKSRRLYIGNVPYHVGLTDVALTQFFSALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHV-------KETDPAGNAQRDR-TPTTEPNSASRRTPQAHTAQD---ENLQSAVAKQKETIR--SEAVGNSASNPTTPREQ-EREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKSGIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIVAIGLPDCNTVAEAAARSGTGSSAMRD 427
            MHAASPPRSSAR+RR   S +ESDRKRAR +RLSP A+PR  PS  DR WER D Y  + +P    S+  R  +EN LQNGSPY +RP P    M  PLPNTSKSRRLYIGNVPY VGLTD+A TQFFSALYIA FGPN+P +PLPV+SFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSG+NLVP+ VNV AVMELC+KL GIV+APAQLAAIAA Q +      +  PS         K  D A     D   P T+ N+   R      A+D   E++    + +  T R  S A      N +  +++ +  YTVISLQNLVTD+DL G++EDYEDLVADVQAECENYGSV EVNIPK G WKRTAFIQF  S +AK AVEALKKRVFDKR+IVA+GL D  T +EAAAR GTGS  M+D
Sbjct:    1 MHAASPPRSSARARRPS-SPYESDRKRARTDRLSPEAIPRTRPS--DRNWER-DPYDPHRSPYGKHSYSHRPKYENGLQNGSPYASRPTP---MMHVPLPNTSKSRRLYIGNVPYQVGLTDIAFTQFFSALYIAAFGPNKPGEPLPVLSFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGLNLVPESVNVSAVMELCEKLGGIVAAPAQLAAIAACQPARTSSRTASPPSKAEQNLSTNKSEDVAVPRSEDNFKPATDRNTIDPRARPLREARDMRSEDMTHRPSHKSPTDRGDSNARDRPGGNVSKAKDEADVAYTVISLQNLVTDEDLKGNEEDYEDLVADVQAECENYGSVVEVNIPKRGQWKRTAFIQFSISSDAKKAVEALKKRVFDKRKIVALGLADYQTASEAAARPGTGSGEMQD 438          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A1X6NPD3_PORUM (RRM domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPD3_PORUM)

HSP 1 Score: 127 bits (319), Expect = 3.950e-28
Identity = 74/159 (46.54%), Postives = 100/159 (62.89%), Query Frame = 0
Query:  100 KSRRLYIGNVPYHVGLTDVALTQFFSALYIAGFG----PNR-------PAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMNLVPDV---VNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPS 244
            K RRLY+GN+P H G+T+ AL + F+ALY+A FG    P+        PA   PV S WLHA+GKF F+E+R EQ+AVN++  +GV LHGRPLR+NRPSDY     + +   +VP     V+  ++  LC +L GIV  PAQ   +AA+Q    Q MP+
Sbjct:  388 KVRRLYVGNLPIHPGVTEQALLELFNALYLAAFGIVNLPSTGVDAVPAPATTPPVSSVWLHAEGKFSFIEMRTEQDAVNLIGLSGVSLHGRPLRINRPSDY-----HAAATGIVPPQPMPVDYVSLGRLCSQLGGIVQPPAQQH-VAAAQAQLLQPMPA 540          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A2G8KGU4_STIJA (Splicing factor U2AF subunit (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KGU4_STIJA)

HSP 1 Score: 89.4 bits (220), Expect = 1.200e-15
Identity = 91/332 (27.41%), Postives = 145/332 (43.67%), Query Frame = 0
Query:   98 TSKSRRLYIGNVPYHVGLTDVALTQFFSALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMNLV-------------PDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETDPAGNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVGNSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKS-------GIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            T ++RRLY+GN+P+  G+++ A+  FF+           P   LPV++  ++ D  F F+E R   E    M F+GV   G+ L++ RP DY+P         VH P  ++ V             P+ +N   + EL      + +    L   +A+  S        +               D T TT+  S +         +   +Q A    K   +S+ +  S      P+       V+ L N+VT ++L  DDE+YED+V DV+ EC+ YG V  + IP+        G  K   F++F  ++EAK A EAL  R F  R ++
Sbjct:  136 TRQARRLYVGNIPF--GVSEEAMVDFFNDHMHESKLSQAPG--LPVLAVQVNHDKNFAFLEFRSVDETTQAMAFDGVMFQGQALKIRRPKDYQPVPGMSETPTVHVPGVVSTVVQDSPHKIFIGGLPNYLNEDQIKELLSSFGTLKAF--NLVKDSATSLSKGYAFCEYI---------------DHTKTTQ--SIAGLNGMQLGEKKLIVQRASVGAKNAQQSQ-LAVSVPGLELPQTSGPVTEVLCLMNMVTPEEL-MDDEEYEDIVEDVKEECQKYGLVRSLEIPRPYQGVDVPGTGK--IFVEFMNAVEAKKAQEALSGRKFANRVVM 440          
BLAST of Gchil7162.t1 vs. uniprot
Match: UPI00065B7BF2 (splicing factor U2AF 50 kDa subunit isoform X1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B7BF2)

HSP 1 Score: 88.6 bits (218), Expect = 2.050e-15
Identity = 93/338 (27.51%), Postives = 150/338 (44.38%), Query Frame = 0
Query:  100 KSRRLYIGNVPYHVGLTDVALTQFFS-ALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---EVHNPSGMNLVPDVVNVRAVMELCDKL-----------DGIVSAPAQLAAIAA------SQTSDEQRMPSVVPSHVKETDPA-----GNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVG---NSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKS-------GIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            ++RRLY+GN+P+  G+TD A+  FF+  + I G      A+  PVI+  ++ D  F F+E R   E    + F+G+   G+PL++ RPSDY+P      NP+    VP VV+   V +   K+           D +         ++A      S T   +       + V  TD A     G    D+                   Q  ++ +  A+Q+  ++ +  G   N  + P T         V+ L N++T ++L+ +DE YED+V DV+ EC  YG V  + IP+        G+ K   F++F   +E + A  AL  R F  R +V
Sbjct:  126 QARRLYVGNIPF--GMTDEAMMDFFNHQMRITGLAQ---AEGNPVIAVQINLDKNFAFLEFRSVDETTQALAFDGISFQGQPLKIRRPSDYKPLPGMAENPT--LAVPGVVST-VVQDSAHKIFIGGLPSYLNEDQVKELLVSFGPLSAFNLVKDSATGLTKGFAFCEYADVSVTDQACAGLNGMQLGDK---------------KLIVQRASVGAKNAQQQAPVQLQVPGLNLNQGAGPATE--------VLCLMNMITPEELEDEDE-YEDIVEDVKEECGKYGVVVSLEIPRPIRGVEVPGLGK--IFVEFTSIIECQRAQAALTGRKFSNRVVV 429          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A2C9JG43_BIOGL (Splicing factor U2AF subunit n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9JG43_BIOGL)

HSP 1 Score: 86.3 bits (212), Expect = 1.180e-14
Identity = 92/338 (27.22%), Postives = 149/338 (44.08%), Query Frame = 0
Query:  100 KSRRLYIGNVPYHVGLTDVALTQFFS-ALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---EVHNPSGMNLVPDVVNVRAVMELCDKL-----------DGIVSAPAQLAAIAA------SQTSDEQRMPSVVPSHVKETDPA-----GNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVG---NSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKS-------GIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            ++RRLY+G +P+  G+TD A+  FF+  + I G      A+  PVI+  ++ D  F F+E R   E    + F+G+   G+PL++ RPSDY+P      NP+    VP VV+   V +   K+           D +         ++A      S T   +       + V  TD A     G    D+                   Q  ++ +  A+Q+  ++ +  G   N  + P T         V+ L N++T ++L  D+E+YED+V DV+ EC  YG V  + IP+        G+ K   F++F   +E + A  AL  R F  R +V
Sbjct:  124 QARRLYVGGIPF--GMTDEAMMDFFNHQMRITGLAQ---AEGNPVIAVQINLDKNFAFLEFRSVDETTQALAFDGISFQGQPLKIRRPSDYKPLPGMAENPT--LAVPGVVST-VVQDSAHKIFIGGLPSYLNEDQVKELLVSFGPLSAFNLVKDSATGLTKGFAFCEYADVSVTDQACAGLNGMQLGDK---------------KLIVQRASVGAKNAQQQAPVQLQVPGLNLNQGAGPATE--------VLCLMNMITPEEL-VDEEEYEDIVEDVKEECGKYGIVMSLEIPRPIKGVEVPGVGK--IFVEFNSIIECQKAQAALTGRKFSNRVVV 427          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A2T7Q155_POMCA (Splicing factor U2AF subunit n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7Q155_POMCA)

HSP 1 Score: 85.9 bits (211), Expect = 1.520e-14
Identity = 98/380 (25.79%), Postives = 169/380 (44.47%), Query Frame = 0
Query:   65 PRRASHENALQNGSPYGARPAPPALSMQPPL-PNTS----------KSRRLYIGNVPYHVGLTDVALTQFFS-ALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---EVHNPSGMNLVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETDPAGNAQRDRTPTT----------EPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVGNSASNPTTPREQE-----------REYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKS-------GIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            P    H   +Q  +   A   P AL +  P+ PN +          ++RRLY+GN+P+  G+T+ ++  FF+  + I G      A+  PVI+  ++ D  F F+ELR   E    + F+G+   G+PL++ RPSDY+P      NP+    VP VV+   V +   K+  I   P+ L       T D+ +   +    +K    A N  +D               +PN   +     +  Q       +  +K  ++  +VG   +    P + +           +   V+ L N++  ++L+ D+E+YED++ DV+ EC  YG V  + IP+        G+ K   F++F   ++ + A +AL  R F  R +V
Sbjct:   70 PPGFEHITPMQYKAMQAAGQIPQALPVTAPINPNATVTLPGSAMSRQARRLYVGNIPF--GVTEESMMDFFNHQMKITGLAQ---AEGNPVIAVHINLDKNFAFLELRSVDETTQALAFDGISYEGQPLKIRRPSDYKPLPGMAENPT--LAVPGVVST-VVQDSAHKIF-IGGLPSYL-------TEDQMKELLISFGPLK----AFNLVKDNATGLSKGFAFCEYLDPNVTDQACAGLNGMQ-------LGDKKLIVQRASVGAKNAQHQAPVQLQVPGLNLNQGAGQPTEVLCLMNMILPEELE-DEEEYEDILEDVREECGKYGIVRSLEIPRPIKGVEVPGVGK--IFVEFSSLIDCQKAQQALAGRKFSNRVVV 419          
BLAST of Gchil7162.t1 vs. uniprot
Match: UPI000D72CA07 (splicing factor U2AF 50 kDa subunit-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72CA07)

HSP 1 Score: 85.9 bits (211), Expect = 1.630e-14
Identity = 98/380 (25.79%), Postives = 169/380 (44.47%), Query Frame = 0
Query:   65 PRRASHENALQNGSPYGARPAPPALSMQPPL-PNTS----------KSRRLYIGNVPYHVGLTDVALTQFFS-ALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP---EVHNPSGMNLVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETDPAGNAQRDRTPTT----------EPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVGNSASNPTTPREQE-----------REYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKS-------GIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            P    H   +Q  +   A   P AL +  P+ PN +          ++RRLY+GN+P+  G+T+ ++  FF+  + I G      A+  PVI+  ++ D  F F+ELR   E    + F+G+   G+PL++ RPSDY+P      NP+    VP VV+   V +   K+  I   P+ L       T D+ +   +    +K    A N  +D               +PN   +     +  Q       +  +K  ++  +VG   +    P + +           +   V+ L N++  ++L+ D+E+YED++ DV+ EC  YG V  + IP+        G+ K   F++F   ++ + A +AL  R F  R +V
Sbjct:   84 PPGFEHITPMQYKAMQAAGQIPQALPVTAPINPNATVTLPGSAMSRQARRLYVGNIPF--GVTEESMMDFFNHQMKITGLAQ---AEGNPVIAVHINLDKNFAFLELRSVDETTQALAFDGISYEGQPLKIRRPSDYKPLPGMAENPT--LAVPGVVST-VVQDSAHKIF-IGGLPSYL-------TEDQMKELLISFGPLK----AFNLVKDNATGLSKGFAFCEYLDPNVTDQACAGLNGMQ-------LGDKKLIVQRASVGAKNAQHQAPVQLQVPGLNLNQGAGQPTEVLCLMNMILPEELE-DEEEYEDILEDVREECGKYGIVRSLEIPRPIKGVEVPGVGK--IFVEFSSLIDCQKAQQALAGRKFSNRVVV 433          
BLAST of Gchil7162.t1 vs. uniprot
Match: L1LBL1_THEEQ (Uncharacterized protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L1LBL1_THEEQ)

HSP 1 Score: 85.1 bits (209), Expect = 3.040e-14
Identity = 84/289 (29.07%), Postives = 137/289 (47.40%), Query Frame = 0
Query:   98 TSKSRRLYIGNVPYHVGLTDVA-LTQFFSALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEV----HNPSGMNLVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETD------PAGNAQRDRTPTTEPNSASRRTPQAHTAQDE-NLQSAVAKQKETIRSEAVGNSASNPTTPREQ---------EREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPK 365
            T   R +Y+GN+P    ++DV+ L  F +   IA  G + P  P   +  W+ +D  + F+ELR  +EA N MQ  G+   G  +RVNRP  Y PE+     +P+   L P ++ +  +  L +  + IV+A   LA   A   +D   +  + PS  +++D        G  +       +P+         H  Q +  L+   A  K  +  +AV     NP+  R+Q         E    V+ L NLV+ ++LD DD +Y D++ DV+ ECE+YG V  + +P+
Sbjct:   73 TRPYREIYVGNIP---PVSDVSTLLDFLNEALIAINGTSMPGNPC--LKGWISSDSHYAFIELRTMEEASNCMQLTGLNCMGYNIRVNRPKTYTPEMLALAPSPTVPTLDPSLLAM-GLKALKNAREQIVAASDILATEKAKAMTDRLCIIDI-PSETQDSDLKSAIEAIGQVKYIHFINDDPSKRVCLFEYQHIEQQKIALEQLPANHKVIMAIDAVTQGIINPSYIRQQLEKCEIMRPEVPTRVLWLSNLVSKEELD-DDAEYFDIIDDVRTECEDYGQVIRLELPR 353          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A7S2P5Q2_BIGNA (Hypothetical protein (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2P5Q2_BIGNA)

HSP 1 Score: 84.3 bits (207), Expect = 3.570e-14
Identity = 84/317 (26.50%), Postives = 136/317 (42.90%), Query Frame = 0
Query:   98 TSKSRRLYIGNVPYHVGLTDVALTQFFSALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQ-FNGVFLHGRPLRVNRPSDYRPEVHN--------PSGMNLVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETDPAGNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVGNSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPKSG-----IWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQI 400
            T ++RRLYIG++P H+GLT+  L  FF+   I+         P P++S W+ ++  F F+E R   +    M  F G+ L GR LR+ RP+D++P   N        P+G    P  +N  A         G  S+   L+      TS++ +    + + V E                                    S  AK++E ++ EA      +PT          V+ L N+V  ++L  D EDYED++ DV+ EC  +G V  V IP+ G         T F+ F+++  ++ A + L    F   ++
Sbjct:   61 TRQARRLYIGSLPVHLGLTEKILMDFFTTTAIS----MGVVTPNPILSVWISSEMTFCFVEFRSIADTTACMTLFQGLALGGRALRIGRPADFKPLPSNYDDYIVGFPAGA-FKPPKLNAGA---------GFASSILNLS------TSNDAKKTEALEAPVAE------------------------------------STDAKEEEEVKFEA---HVDSPTK---------VLHLLNMVKAEELKND-EDYEDILEDVKDECAKHGPVSRVIIPRPGQPYTPSLTGTIFVLFEENTASQKARDTLDGMTFSGNRV 308          
BLAST of Gchil7162.t1 vs. uniprot
Match: A0A8C4N7F7_EPTBU (Splicing factor U2AF subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N7F7_EPTBU)

HSP 1 Score: 84.3 bits (207), Expect = 4.770e-14
Identity = 88/322 (27.33%), Postives = 146/322 (45.34%), Query Frame = 0
Query:   98 TSKSRRLYIGNVPYHVGLTDVALTQFFS-ALYIAGFGPNRPAQPLPVISFWLHADGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRP--------EVHNPSGMN-LVPDVVNVRAVMELCDKL-DGIVSAPAQLAAIAASQTSDEQRMPSVVPSHVKETDPAGNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRSEAVGNSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQAECENYGSVEEVNIPK-------SGIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQIV 401
            T ++RRLY+GN+P+  G T+ A+ +FF+  + +AG      A   PV++  ++ D  F F+ELR   EA N + F+G+   G+ L++ RP DY P        +VH P  ++ +VPD  N   V  L   L D  V    Q     +++      +  +V + +      G    D+    +  S   + P A           V  Q   +    V    + PT          ++ L N+VT ++L  D+E+Y D++ D++ EC  YG V  + IP+       +G  K   F++F    + + A +AL  R F  R +V
Sbjct:  124 TRQARRLYVGNIPF--GATEDAMVEFFNNQMKLAGLAT---APGSPVLAVQINLDKNFAFLELRSVDEATNALAFDGILFMGQNLKLRRPHDYTPLPGLSEGPQVHVPGVVSTVVPDTPNKVFVGGLPTYLADDQVIMHLQEGVRESAKGGQYGYISKIVVTALN-----GMQVGDKKLVVQRASVGAKAPVA----------PVTVQVPGLDVPDVLQQGTQPTR---------ILCLLNMVTPEELI-DEEEYNDILDDIREECNKYGPVVSIEIPRPVDGIEVAGCGK--IFVEFATVTDCQKAQQALSGRKFANRIVV 413          
The following BLAST results are available for this feature:
BLAST of Gchil7162.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDX6_9FLOR5.570e-16863.82Splicing factor U2AF 65 kDa subunit n=1 Tax=Gracil... [more]
A0A1X6NPD3_PORUM3.950e-2846.54RRM domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A2G8KGU4_STIJA1.200e-1527.41Splicing factor U2AF subunit (Fragment) n=1 Tax=St... [more]
UPI00065B7BF22.050e-1527.51splicing factor U2AF 50 kDa subunit isoform X1 n=1... [more]
A0A2C9JG43_BIOGL1.180e-1427.22Splicing factor U2AF subunit n=4 Tax=Euthyneura Ta... [more]
A0A2T7Q155_POMCA1.520e-1425.79Splicing factor U2AF subunit n=1 Tax=Pomacea canal... [more]
UPI000D72CA071.630e-1425.79splicing factor U2AF 50 kDa subunit-like n=1 Tax=P... [more]
L1LBL1_THEEQ3.040e-1429.07Uncharacterized protein n=1 Tax=Theileria equi str... [more]
A0A7S2P5Q2_BIGNA3.570e-1426.50Hypothetical protein (Fragment) n=1 Tax=Bigelowiel... [more]
A0A8C4N7F7_EPTBU4.770e-1427.33Splicing factor U2AF subunit n=2 Tax=Eptatretus bu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 322..403
e-value: 0.024
score: 20.9
coord: 103..184
e-value: 0.21
score: 12.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 351..400
e-value: 2.2E-6
score: 27.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 102..188
score: 10.326077
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 321..400
score: 10.036136
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 321..403
e-value: 1.1E-18
score: 69.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 97..203
e-value: 8.5E-17
score: 63.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..96
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 12..402
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 101..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:390586..391869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7162.t1Gchil7162.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 390586..391869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7162.t1 ID=Gchil7162.t1|Name=Gchil7162.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=428bp
MHAASPPRSSARSRRTGGSSHESDRKRARVERLSPNAVPRRSPSHRDRAW
ERGDGYGSYSNPSHPRRASHENALQNGSPYGARPAPPALSMQPPLPNTSK
SRRLYIGNVPYHVGLTDVALTQFFSALYIAGFGPNRPAQPLPVISFWLHA
DGKFGFMELRGEQEAVNMMQFNGVFLHGRPLRVNRPSDYRPEVHNPSGMN
LVPDVVNVRAVMELCDKLDGIVSAPAQLAAIAASQTSDEQRMPSVVPSHV
KETDPAGNAQRDRTPTTEPNSASRRTPQAHTAQDENLQSAVAKQKETIRS
EAVGNSASNPTTPREQEREYTVISLQNLVTDDDLDGDDEDYEDLVADVQA
ECENYGSVEEVNIPKSGIWKRTAFIQFKKSLEAKNAVEALKKRVFDKRQI
VAIGLPDCNTVAEAAARSGTGSSAMRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf