Gchil876.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil876.t1
Unique NameGchil876.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length480
Homology
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BLAST of Gchil876.t1 vs. uniprot
Match: A0A2V3ICW7_9FLOR (Uma2 domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW7_9FLOR)

HSP 1 Score: 410 bits (1053), Expect = 1.350e-136
Identity = 222/314 (70.70%), Postives = 253/314 (80.57%), Query Frame = 0 
Query:   14 MSSSEESSMPAVTRQPASPPPSPLPAVNENSSLPSTPQSLFEEQEEQSPATVLDRRQLGALHLLPATAEEFFDIDRFKYGEYDLVDGLLNWRGMSERDRNKEQAKNLLYRFKEVELNNPTSNRVATLEATIAIPTQRHLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEARKRLSPTSQVITFPVGHKP-QVVVENTSSDERRDMEEKRELYEQKEIDKYIVIRNRARAKNPHPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLKAKDCINPGKPDQWHHREGRQERMRREEAEK 326
            M  SEE SMPA  +QPAS   S LP V ENSSL ST QSLF+E+    PA  LDRR+LGALHL PAT EE FDIDRFKYGEYDLV+GLL WRGMSE +RNKEQAK+LLYRF+  E + PT+ RVATLEATIAIPT+R+L S QPSSSNA PQS  SE++ TP RGHP YSVVRAD A+GER+S+E R  LSP S  ITFP+   P +VVVENTS++ RRDM EK+ELY Q++I KYI I N ARAKNP PAV+EGNLRNGKY GMEKPLRG+DEV+LGPIGVLKAKDCI+PG PD   HREGR++RM+REEAEK
Sbjct:    1 MQFSEEDSMPAPIQQPASLALSSLPEVGENSSLESTSQSLFQEE---LPAAALDRRKLGALHLQPATVEELFDIDRFKYGEYDLVEGLLIWRGMSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEK 311
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BLAST of Gchil876.t1 vs. uniprot
Match: A0A2V3IBX3_9FLOR (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX3_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 1.770e-95
Identity = 157/221 (71.04%), Postives = 183/221 (82.81%), Query Frame = 0 
Query:  107 MSERDRNKEQAKNLLYRFKEVELNNPTSNRVATLEATIAIPTQRHLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEARKRLSPTSQVITFPVGHKP-QVVVENTSSDERRDMEEKRELYEQKEIDKYIVIRNRARAKNPHPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLKAKDCINPGKPDQWHHREGRQERMRREEAEK 326
            MSE +RNKEQAK+LLYRF+  E + PT+ RVATLEATIAIPT+R+L S QPSSSNA PQS  SE++ TP RGHP YSVVRAD A+GER+S+E R  LSP S  ITFP+   P +VVVENTS++ RRDM EK+ELY Q++I KYI I N ARAKNP PAV+EGNLRNGKY GMEKPLRG+DEV+LGPIGVLKAKDCI+PG PD   HREGR++RM+REEAEK
Sbjct:    1 MSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLKRTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEK 221
[Close]
BLAST of Gchil876.t1 vs. uniprot
Match: A0A2V3IF83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF83_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 5.500e-17
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 0 
Query:  140 LEATIAIPTQRHLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEARKRLSPTSQVITFPVGHKPQVVVENTSSD 228
            ++A +AIP +R+ R  QPSSSN +P S  S +++TP RG+P+YSVV  DLAI  +LSDE R R+SP SQ I F + H PQ V+E++S++
Sbjct:    1 MDAAVAIPIKRYPRF-QPSSSNDAPLSDDSNDSSTPRRGNPKYSVVSPDLAIANKLSDEPRSRISPASQNIRFRLNHPPQFVLESSSTN 88
The following BLAST results are available for this feature:
BLAST of Gchil876.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ICW7_9FLOR1.350e-13670.70Uma2 domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBX3_9FLOR1.770e-9571.04Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IF83_9FLOR5.500e-1751.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..292
IPR008538Putative restriction endonucleasePFAMPF05685Uma2coord: 203..275
e-value: 2.9E-5
score: 23.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:741436..742875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1Gchil876.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 741436..742875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=480bp
MYGLAESAFPSQPMSSSEESSMPAVTRQPASPPPSPLPAVNENSSLPSTP
QSLFEEQEEQSPATVLDRRQLGALHLLPATAEEFFDIDRFKYGEYDLVDG
LLNWRGMSERDRNKEQAKNLLYRFKEVELNNPTSNRVATLEATIAIPTQR
HLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEAR
KRLSPTSQVITFPVGHKPQVVVENTSSDERRDMEEKRELYEQKEIDKYIV
IRNRARAKNPHPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLKAKDC
INPGKPDQWHHREGRQERMRREEAEKEKREEKERRQAAEKREREEKERRQ
AAEKREREEKERRQAAEKEKREEKERRQAAEKEKREEKERRQAAEKEKRE
EKERRQAAEKREREEKERRQKAEARIREQRRQMREAGLPVGESSSSSRGS
PSSNNSRFSSSPGSRSSLSPKSPARKKRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008538Uma2